RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 RNF40O75150 1001 aa9.16□□□□□ -0.94
THBS3-210ENST00000541576 DDHD2O94830 711 aa9.16□□□□□ -0.94
THBS3-210ENST00000541576 ODC1P11926 461 aa9.16□□□□□ -0.94
THBS3-210ENST00000541576 COMTP21964 271 aa9.16□□□□□ -0.94
THBS3-210ENST00000541576 LHX1P48742 406 aa9.16□□□□□ -0.94
THBS3-210ENST00000541576 RNASE9P60153 205 aaKnown RBP9.16□□□□□ -0.94
THBS3-210ENST00000541576 DSC1Q08554 894 aa9.16□□□□□ -0.94
THBS3-210ENST00000541576 KCTD19Q17RG1 926 aaPredicted RBP9.16□□□□□ -0.94
THBS3-210ENST00000541576 CYP4A22Q5TCH4 519 aa9.16□□□□□ -0.94
THBS3-210ENST00000541576 DNAJC24Q6P3W2 148 aa9.16□□□□□ -0.94
THBS3-210ENST00000541576 B3GALNT2Q8NCR0 500 aa9.16□□□□□ -0.94
THBS3-210ENST00000541576 HASPINQ8TF76 798 aa9.16□□□□□ -0.94
THBS3-210ENST00000541576 C18orf8Q96DM3 657 aa9.16□□□□□ -0.94
THBS3-210ENST00000541576 CPXM1Q96SM3 734 aa9.16□□□□□ -0.94
THBS3-210ENST00000541576 DDX43Q9NXZ2 648 aaKnown RBP9.16□□□□□ -0.94
THBS3-210ENST00000541576 TIMM13Q9Y5L4 95 aaPredicted RBP9.16□□□□□ -0.94
THBS3-210ENST00000541576 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.16□□□□□ -0.94
THBS3-210ENST00000541576 I3L4J1 428 aa9.16□□□□□ -0.94
THBS3-210ENST00000541576 HOXA2O43364 376 aa9.16□□□□□ -0.94
THBS3-210ENST00000541576 B4GALT3O60512 393 aa9.16□□□□□ -0.94
THBS3-210ENST00000541576 CCDC130P13994 396 aa9.16□□□□□ -0.94
THBS3-210ENST00000541576 ACAT1P24752 427 aaKnown RBP9.16□□□□□ -0.94
THBS3-210ENST00000541576 BRCC3P46736 316 aa9.16□□□□□ -0.94
THBS3-210ENST00000541576 PSMC1P62191 440 aaKnown RBP9.16□□□□□ -0.94
THBS3-210ENST00000541576 CKAP4Q07065 602 aaKnown RBP9.16□□□□□ -0.94
THBS3-210ENST00000541576 CD300LGQ6UXG3 332 aa9.16□□□□□ -0.94
THBS3-210ENST00000541576 TTC30AQ86WT1 665 aa9.16□□□□□ -0.94
THBS3-210ENST00000541576 C3orf20Q8ND61 904 aa9.16□□□□□ -0.94
THBS3-210ENST00000541576 PPM1EQ8WY54 764 aa9.16□□□□□ -0.94
THBS3-210ENST00000541576 TCRBV5S1A1TA0A578 114 aa9.16□□□□□ -0.94
THBS3-210ENST00000541576 SETSIPP0DME0 302 aa9.16□□□□□ -0.94
THBS3-210ENST00000541576 ADORA2BP29275 332 aa9.16□□□□□ -0.94
THBS3-210ENST00000541576 PKDCCQ504Y2 493 aa9.16□□□□□ -0.94
THBS3-210ENST00000541576 CCDC181Q5TID7 509 aa9.16□□□□□ -0.94
THBS3-210ENST00000541576 COLGALT2Q8IYK4 626 aa9.16□□□□□ -0.94
THBS3-210ENST00000541576 FEZF2Q8TBJ5 459 aa9.16□□□□□ -0.94
THBS3-210ENST00000541576 SLC2A14Q8TDB8 520 aa9.16□□□□□ -0.94
THBS3-210ENST00000541576 RSPH1Q8WYR4 309 aa9.16□□□□□ -0.94
THBS3-210ENST00000541576 ALG3Q92685 438 aa9.16□□□□□ -0.94
THBS3-210ENST00000541576 KRT35Q92764 455 aa9.16□□□□□ -0.94
THBS3-210ENST00000541576 ANKZF1Q9H8Y5 726 aa9.16□□□□□ -0.94
THBS3-210ENST00000541576 WDR35Q9P2L0 1181 aa9.16□□□□□ -0.94
THBS3-210ENST00000541576 ARHGEF37A1IGU5 675 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 CCDC151A5D8V7 595 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 M0QZQ0 153 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 SPOPO43791 374 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 ITGB1P05556 798 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 PFKMP08237 780 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 PTPN1P18031 435 aaKnown RBP9.15□□□□□ -0.94
THBS3-210ENST00000541576 RFC2P35250 354 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 OR1G1P47890 313 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 MARCKSL1P49006 195 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 BEND6Q5SZJ8 279 aaPredicted RBP9.15□□□□□ -0.94
THBS3-210ENST00000541576 DCAF12L1Q5VU92 463 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 DCUN1D2Q6PH85 259 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 METTL23Q86XA0 190 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 NPAS4Q8IUM7 802 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 ANKRD52Q8NB46 1076 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 NCAPGQ9BPX3 1015 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 MIS12Q9H081 205 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 PRDM5Q9NQX1 630 aaPredicted RBP9.15□□□□□ -0.94
THBS3-210ENST00000541576 DSEQ9UL01 958 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 MIF4GDA9UHW6 222 aaKnown RBP9.15□□□□□ -0.94
THBS3-210ENST00000541576 F8W810 466 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 GOLGA8SH3BPF8 625 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 ATP2C2O75185 946 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 ERBB2P04626 1255 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 PCSK1P29120 753 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 GABRB2P47870 512 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 GATMP50440 423 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 BCAT1P54687 386 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 RPL7AP62424 266 aaKnown RBP9.15□□□□□ -0.94
THBS3-210ENST00000541576 TAP1Q03518 808 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 IKBKEQ14164 716 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 CNKSR3Q6P9H4 555 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 ZNF572Q7Z3I7 529 aaPredicted RBP9.15□□□□□ -0.94
THBS3-210ENST00000541576 CRIPAKQ8N1N5 446 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 SPATA4Q8NEY3 305 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 SPATA18Q8TC71 538 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 CD101Q93033 1021 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 PBKQ96KB5 322 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 SUSD3Q96L08 255 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 CASD1Q96PB1 797 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 SYT15Q9BQS2 421 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 SELENOOQ9BVL4 669 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 RNF14Q9UBS8 474 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 DNAJB4Q9UDY4 337 aa9.15□□□□□ -0.94
THBS3-210ENST00000541576 PRG3Q9Y2Y8 225 aaPredicted RBP9.15□□□□□ -0.94
THBS3-210ENST00000541576 MICAL3Q7RTP6 2002 aa9.15□□□□□ -0.95
THBS3-210ENST00000541576 CES2O00748 559 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 CEP104O60308 925 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 PROSCO94903 275 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 CYP11A1P05108 521 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 SLC1A1P43005 524 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 PAFAH1B1P43034 410 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 RGS7P49802 495 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 GSCP56915 257 aaPredicted RBP9.14□□□□□ -0.95
THBS3-210ENST00000541576 C2orf54Q08AI8 447 aa9.14□□□□□ -0.95
THBS3-210ENST00000541576 BST2Q10589 180 aaKnown RBP9.14□□□□□ -0.95
THBS3-210ENST00000541576 ZNF268Q14587 947 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms