RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 C12orf29Q8N999 325 aa16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 N4BP2L2Q92802 583 aaPredicted RBP16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 GAD1Q99259 594 aa16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 SPTLC1O15269 473 aa16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 IFFO1Q0D2I5 559 aa16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 PTP4A2Q12974 167 aa16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 TRIM71Q2Q1W2 868 aaKnown RBP16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 DAB2IPQ5VWQ8 1189 aa16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 TMEM35BQ8NCS4 154 aa16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 CCDC26Q8TAB7 109 aa16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 CCT6BQ92526 530 aa16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 KRT35Q92764 455 aa16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 TRIM11Q96F44 468 aa16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 FAXDC2Q96IV6 333 aa16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 UNC93B1Q9H1C4 597 aa16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 ERVK-5Q9HDB9 667 aa16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 ATP8A1Q9Y2Q0 1164 aa16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 PIRO00625 290 aa16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 DDX3YO15523 660 aaKnown RBP16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 HCRTO43612 131 aa16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 MYBL1P10243 752 aa16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 IGFBP6P24592 240 aaPredicted RBP16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 INCA1Q0VD86 236 aa16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 E2F5Q15329 346 aa16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 CYP4A22Q5TCH4 519 aa16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 LIN9Q5TKA1 542 aa16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 DCAF12L1Q5VU92 463 aa16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 RASGEF1CQ8N431 466 aa16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 LRRC52Q8N7C0 313 aa16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 TRIM51Q9BSJ1 452 aa16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 SLITRK6Q9H5Y7 841 aa16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 CHST12Q9NRB3 414 aa16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 CYTH4Q9UIA0 394 aa16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 PCDHGC3Q9UN70 934 aa16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 CEP83Q9Y592 693 aa16.1■□□□□ 0.17
CLPTM1-202ENST00000541297 SPOPO43791 374 aa16.09■□□□□ 0.17
CLPTM1-202ENST00000541297 CD4P01730 458 aa16.09■□□□□ 0.17
CLPTM1-202ENST00000541297 CKBP12277 381 aa16.09■□□□□ 0.17
CLPTM1-202ENST00000541297 MMP8P22894 467 aa16.09■□□□□ 0.17
CLPTM1-202ENST00000541297 SF3A3Q12874 501 aaKnown RBP eCLIP16.09■□□□□ 0.17
CLPTM1-202ENST00000541297 ZNF211Q13398 564 aaPredicted RBP16.09■□□□□ 0.17
CLPTM1-202ENST00000541297 XRCC4Q13426 336 aa16.09■□□□□ 0.17
CLPTM1-202ENST00000541297 SEC14L1Q92503 715 aa16.09■□□□□ 0.17
CLPTM1-202ENST00000541297 AVENQ9NQS1 362 aaPredicted RBP16.09■□□□□ 0.17
CLPTM1-202ENST00000541297 TJP2Q9UDY2 1190 aa16.09■□□□□ 0.17
CLPTM1-202ENST00000541297 UTP11Q9Y3A2 253 aaKnown RBP16.09■□□□□ 0.17
CLPTM1-202ENST00000541297 NR2E1Q9Y466 385 aa16.09■□□□□ 0.17
CLPTM1-202ENST00000541297 NME7Q9Y5B8 376 aa16.09■□□□□ 0.17
CLPTM1-202ENST00000541297 MED7O43513 233 aa16.09■□□□□ 0.17
CLPTM1-202ENST00000541297 XPOTO43592 962 aaKnown RBP16.09■□□□□ 0.17
CLPTM1-202ENST00000541297 CAND2O75155 1236 aa16.09■□□□□ 0.17
CLPTM1-202ENST00000541297 LSM8O95777 96 aaKnown RBP16.09■□□□□ 0.17
CLPTM1-202ENST00000541297 RPLP2P05387 115 aaKnown RBP16.09■□□□□ 0.17
CLPTM1-202ENST00000541297 MAMLD1Q13495 774 aa16.09■□□□□ 0.17
CLPTM1-202ENST00000541297 MTFR1Q15390 333 aa16.09■□□□□ 0.17
CLPTM1-202ENST00000541297 SOWAHAQ2M3V2 549 aa16.09■□□□□ 0.17
CLPTM1-202ENST00000541297 ACOT1Q86TX2 421 aa16.09■□□□□ 0.17
CLPTM1-202ENST00000541297 CCDC50Q8IVM0 306 aa16.09■□□□□ 0.17
CLPTM1-202ENST00000541297 GSTCDQ8NEC7 633 aa16.09■□□□□ 0.17
CLPTM1-202ENST00000541297 ALG3Q92685 438 aa16.09■□□□□ 0.17
CLPTM1-202ENST00000541297 ADAM2Q99965 735 aa16.09■□□□□ 0.17
CLPTM1-202ENST00000541297 TSEN34Q9BSV6 310 aaKnown RBP16.09■□□□□ 0.17
CLPTM1-202ENST00000541297 BEGAINQ9BUH8 593 aa16.09■□□□□ 0.17
CLPTM1-202ENST00000541297 NT5C1AQ9BXI3 368 aa16.09■□□□□ 0.17
CLPTM1-202ENST00000541297 MIOSQ9NXC5 875 aa16.09■□□□□ 0.17
CLPTM1-202ENST00000541297 KPNA7A9QM74 516 aa16.08■□□□□ 0.16
CLPTM1-202ENST00000541297 M0QYV0 167 aa16.08■□□□□ 0.16
CLPTM1-202ENST00000541297 MICAL2O94851 1124 aa16.08■□□□□ 0.16
CLPTM1-202ENST00000541297 ATF7P17544 494 aaPredicted RBP16.08■□□□□ 0.16
CLPTM1-202ENST00000541297 PRMT2P55345 433 aa16.08■□□□□ 0.16
CLPTM1-202ENST00000541297 C1QBPQ07021 282 aaKnown RBP16.08■□□□□ 0.16
CLPTM1-202ENST00000541297 AADACL2Q6P093 401 aa16.08■□□□□ 0.16
CLPTM1-202ENST00000541297 AGMOQ6ZNB7 445 aa16.08■□□□□ 0.16
CLPTM1-202ENST00000541297 ERICH1Q86X53 443 aa16.08■□□□□ 0.16
CLPTM1-202ENST00000541297 OR6B3Q8NGW1 331 aa16.08■□□□□ 0.16
CLPTM1-202ENST00000541297 UBA3Q8TBC4 463 aa16.08■□□□□ 0.16
CLPTM1-202ENST00000541297 TLCD1Q96CP7 247 aa16.08■□□□□ 0.16
CLPTM1-202ENST00000541297 CHMP6Q96FZ7 201 aa16.08■□□□□ 0.16
CLPTM1-202ENST00000541297 PPP1R10Q96QC0 940 aaKnown RBP16.08■□□□□ 0.16
CLPTM1-202ENST00000541297 XPO6Q96QU8 1125 aaKnown RBP16.08■□□□□ 0.16
CLPTM1-202ENST00000541297 RPS6KC1Q96S38 1066 aa16.08■□□□□ 0.16
CLPTM1-202ENST00000541297 LPIN3Q9BQK8 851 aa16.08■□□□□ 0.16
CLPTM1-202ENST00000541297 KDM4CQ9H3R0 1056 aa16.08■□□□□ 0.16
CLPTM1-202ENST00000541297 FAM114A2Q9NRY5 505 aa16.08■□□□□ 0.16
CLPTM1-202ENST00000541297 TDRD15B5MCY1 1934 aaKnown RBP16.08■□□□□ 0.16
CLPTM1-202ENST00000541297 ARL5CA6NH57 179 aa16.08■□□□□ 0.16
CLPTM1-202ENST00000541297 KBTBD13C9JR72 458 aa16.08■□□□□ 0.16
CLPTM1-202ENST00000541297 SHBGP04278 402 aa16.08■□□□□ 0.16
CLPTM1-202ENST00000541297 RPL7AP62424 266 aaKnown RBP16.08■□□□□ 0.16
CLPTM1-202ENST00000541297 SGO2Q562F6 1265 aa16.08■□□□□ 0.16
CLPTM1-202ENST00000541297 ERMARDQ5T6L9 678 aa16.08■□□□□ 0.16
CLPTM1-202ENST00000541297 VCPIP1Q96JH7 1222 aa16.08■□□□□ 0.16
CLPTM1-202ENST00000541297 FAM49BQ9NUQ9 324 aa16.08■□□□□ 0.16
CLPTM1-202ENST00000541297 FGGP02679 453 aa16.07■□□□□ 0.16
CLPTM1-202ENST00000541297 SCNN1GP51170 649 aa16.07■□□□□ 0.16
CLPTM1-202ENST00000541297 PTPN20Q4JDL3 420 aa16.07■□□□□ 0.16
CLPTM1-202ENST00000541297 HACE1Q8IYU2 909 aa16.07■□□□□ 0.16
CLPTM1-202ENST00000541297 ZNF560Q96MR9 790 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms