RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 MAGEF1Q9HAY2 307 aa15.48■□□□□ 0.07
MSRB3-209ENST00000540804 NXF1Q9UBU9 619 aaKnown RBP15.48■□□□□ 0.07
MSRB3-209ENST00000540804 UBE4BO95155 1302 aa15.47■□□□□ 0.07
MSRB3-209ENST00000540804 PVALEFA0A1B0GWK0 134 aa15.47■□□□□ 0.07
MSRB3-209ENST00000540804 CLDN5O00501 218 aa15.47■□□□□ 0.07
MSRB3-209ENST00000540804 EXOC3O60645 756 aa15.47■□□□□ 0.07
MSRB3-209ENST00000540804 SLFN14P0C7P3 912 aa15.47■□□□□ 0.07
MSRB3-209ENST00000540804 PFKFB1P16118 471 aa15.47■□□□□ 0.07
MSRB3-209ENST00000540804 DDX6P26196 483 aaKnown RBP eCLIP15.47■□□□□ 0.07
MSRB3-209ENST00000540804 GNL1P36915 607 aaPredicted RBP15.47■□□□□ 0.07
MSRB3-209ENST00000540804 GRIK1P39086 918 aa15.47■□□□□ 0.07
MSRB3-209ENST00000540804 RAP1GAPP47736 663 aa15.47■□□□□ 0.07
MSRB3-209ENST00000540804 CDH8P55286 799 aa15.47■□□□□ 0.07
MSRB3-209ENST00000540804 KNOP1Q1ED39 458 aaKnown RBP15.47■□□□□ 0.07
MSRB3-209ENST00000540804 WDR72Q3MJ13 1102 aa15.47■□□□□ 0.07
MSRB3-209ENST00000540804 KMT5BQ4FZB7 885 aa15.47■□□□□ 0.07
MSRB3-209ENST00000540804 FSTL4Q6MZW2 842 aa15.47■□□□□ 0.07
MSRB3-209ENST00000540804 MAMSTRQ6ZN01 415 aa15.47■□□□□ 0.07
MSRB3-209ENST00000540804 HS2ST1Q7LGA3 356 aa15.47■□□□□ 0.07
MSRB3-209ENST00000540804 CEP57L1Q8IYX8 460 aa15.47■□□□□ 0.07
MSRB3-209ENST00000540804 SPATA18Q8TC71 538 aa15.47■□□□□ 0.07
MSRB3-209ENST00000540804 MSANTD3Q96H12 275 aa15.47■□□□□ 0.07
MSRB3-209ENST00000540804 FUBP3Q96I24 572 aaKnown RBP eCLIP15.47■□□□□ 0.07
MSRB3-209ENST00000540804 XYLT2Q9H1B5 865 aa15.47■□□□□ 0.07
MSRB3-209ENST00000540804 SNX25Q9H3E2 840 aa15.47■□□□□ 0.07
MSRB3-209ENST00000540804 GCNT4Q9P109 453 aa15.47■□□□□ 0.07
MSRB3-209ENST00000540804 CFAP45Q9UL16 551 aa15.47■□□□□ 0.07
MSRB3-209ENST00000540804 WNT6Q9Y6F9 365 aa15.47■□□□□ 0.07
MSRB3-209ENST00000540804 DMXL1Q9Y485 3027 aa15.47■□□□□ 0.07
MSRB3-209ENST00000540804 NUP210Q8TEM1 1887 aaPredicted RBP15.46■□□□□ 0.07
MSRB3-209ENST00000540804 LRRIQ3A6PVS8 624 aaPredicted RBP15.46■□□□□ 0.07
MSRB3-209ENST00000540804 HRO43593 1189 aa15.46■□□□□ 0.07
MSRB3-209ENST00000540804 EGFP01133 1207 aa15.46■□□□□ 0.07
MSRB3-209ENST00000540804 CKMP06732 381 aa15.46■□□□□ 0.07
MSRB3-209ENST00000540804 PRR29P0C7W0 189 aa15.46■□□□□ 0.07
MSRB3-209ENST00000540804 MAGEA11P43364 429 aa15.46■□□□□ 0.07
MSRB3-209ENST00000540804 PXNP49023 591 aaPredicted RBP15.46■□□□□ 0.07
MSRB3-209ENST00000540804 DLG4P78352 724 aa15.46■□□□□ 0.07
MSRB3-209ENST00000540804 ZXDBP98169 803 aa15.46■□□□□ 0.07
MSRB3-209ENST00000540804 MTF1Q14872 753 aa15.46■□□□□ 0.07
MSRB3-209ENST00000540804 ZNF77Q15935 545 aa15.46■□□□□ 0.07
MSRB3-209ENST00000540804 DGKKQ5KSL6 1271 aa15.46■□□□□ 0.07
MSRB3-209ENST00000540804 TDRD10Q5VZ19 366 aaKnown RBP15.46■□□□□ 0.07
MSRB3-209ENST00000540804 C4orf50Q6ZRC1 276 aa15.46■□□□□ 0.07
MSRB3-209ENST00000540804 PRR23BQ6ZRT6 265 aa15.46■□□□□ 0.07
MSRB3-209ENST00000540804 C12orf56Q8IXR9 622 aa15.46■□□□□ 0.07
MSRB3-209ENST00000540804 PIAS4Q8N2W9 510 aaPredicted RBP15.46■□□□□ 0.07
MSRB3-209ENST00000540804 ZNF518BQ9C0D4 1074 aa15.46■□□□□ 0.07
MSRB3-209ENST00000540804 SMYD3Q9H7B4 428 aa15.46■□□□□ 0.07
MSRB3-209ENST00000540804 PARD6AQ9NPB6 346 aa15.46■□□□□ 0.07
MSRB3-209ENST00000540804 UXTQ9UBK9 157 aaPredicted RBP15.46■□□□□ 0.07
MSRB3-209ENST00000540804 FANCMQ8IYD8 2048 aa15.45■□□□□ 0.06
MSRB3-209ENST00000540804 TRAV19A0A0A6YYK7 116 aa15.45■□□□□ 0.06
MSRB3-209ENST00000540804 ANTXRLA6NF34 631 aa15.45■□□□□ 0.06
MSRB3-209ENST00000540804 F8VP50 259 aa15.45■□□□□ 0.06
MSRB3-209ENST00000540804 SCAMP3O14828 347 aaKnown RBP15.45■□□□□ 0.06
MSRB3-209ENST00000540804 PTPN1P18031 435 aaKnown RBP15.45■□□□□ 0.06
MSRB3-209ENST00000540804 TGM1P22735 817 aa15.45■□□□□ 0.06
MSRB3-209ENST00000540804 GALK1P51570 392 aa15.45■□□□□ 0.06
MSRB3-209ENST00000540804 TNNC1P63316 161 aa15.45■□□□□ 0.06
MSRB3-209ENST00000540804 TRPC3Q13507 836 aa15.45■□□□□ 0.06
MSRB3-209ENST00000540804 TMEM196Q5HYL7 178 aa15.45■□□□□ 0.06
MSRB3-209ENST00000540804 ATL3Q6DD88 541 aa15.45■□□□□ 0.06
MSRB3-209ENST00000540804 CC2D1AQ6P1N0 951 aaPredicted RBP15.45■□□□□ 0.06
MSRB3-209ENST00000540804 SCARA5Q6ZMJ2 495 aa15.45■□□□□ 0.06
MSRB3-209ENST00000540804 MYCBPAPQ8TBZ2 947 aa15.45■□□□□ 0.06
MSRB3-209ENST00000540804 SH3RF2Q8TEC5 729 aa15.45■□□□□ 0.06
MSRB3-209ENST00000540804 EZH1Q92800 747 aaPredicted RBP15.45■□□□□ 0.06
MSRB3-209ENST00000540804 IER2Q9BTL4 223 aa15.45■□□□□ 0.06
MSRB3-209ENST00000540804 B3GNT5Q9BYG0 378 aa15.45■□□□□ 0.06
MSRB3-209ENST00000540804 FAM126AQ9BYI3 521 aaPredicted RBP15.45■□□□□ 0.06
MSRB3-209ENST00000540804 SDCBP2Q9H190 292 aa15.45■□□□□ 0.06
MSRB3-209ENST00000540804 LINC00597Q9H2U6 94 aa15.45■□□□□ 0.06
MSRB3-209ENST00000540804 KCTD10Q9H3F6 313 aa15.45■□□□□ 0.06
MSRB3-209ENST00000540804 KIF9Q9HAQ2 790 aa15.45■□□□□ 0.06
MSRB3-209ENST00000540804 DMAC2Q9NW81 257 aa15.45■□□□□ 0.06
MSRB3-209ENST00000540804 DUS2Q9NX74 493 aaKnown RBP15.45■□□□□ 0.06
MSRB3-209ENST00000540804 PTPRZ1P23471 2315 aaPredicted RBP15.45■□□□□ 0.06
MSRB3-209ENST00000540804 ZNF292O60281 2723 aa15.45■□□□□ 0.06
MSRB3-209ENST00000540804 RIF1Q5UIP0 2472 aaKnown RBP15.44■□□□□ 0.06
MSRB3-209ENST00000540804 A8MXQ7 604 aa15.44■□□□□ 0.06
MSRB3-209ENST00000540804 PHACTR2O75167 634 aa15.44■□□□□ 0.06
MSRB3-209ENST00000540804 TACC1O75410 805 aa15.44■□□□□ 0.06
MSRB3-209ENST00000540804 CLSTN1O94985 981 aa15.44■□□□□ 0.06
MSRB3-209ENST00000540804 VNN1O95497 513 aa15.44■□□□□ 0.06
MSRB3-209ENST00000540804 C4BPAP04003 597 aaKnown RBP15.44■□□□□ 0.06
MSRB3-209ENST00000540804 USP17L7P0C7H9 530 aa15.44■□□□□ 0.06
MSRB3-209ENST00000540804 HDCP19113 662 aa15.44■□□□□ 0.06
MSRB3-209ENST00000540804 GJA4P35212 333 aa15.44■□□□□ 0.06
MSRB3-209ENST00000540804 NRLP54845 237 aa15.44■□□□□ 0.06
MSRB3-209ENST00000540804 SNRPFP62306 86 aaKnown RBP15.44■□□□□ 0.06
MSRB3-209ENST00000540804 FAM160A1Q05DH4 1040 aa15.44■□□□□ 0.06
MSRB3-209ENST00000540804 IFRD2Q12894 506 aaPredicted RBP15.44■□□□□ 0.06
MSRB3-209ENST00000540804 USP4Q13107 963 aa15.44■□□□□ 0.06
MSRB3-209ENST00000540804 ORC1Q13415 861 aa15.44■□□□□ 0.06
MSRB3-209ENST00000540804 BIRC3Q13489 604 aa15.44■□□□□ 0.06
MSRB3-209ENST00000540804 ZNF268Q14587 947 aaPredicted RBP15.44■□□□□ 0.06
MSRB3-209ENST00000540804 RSPO4Q2I0M5 234 aaPredicted RBP15.44■□□□□ 0.06
MSRB3-209ENST00000540804 C1orf228Q6PIY5 440 aa15.44■□□□□ 0.06
MSRB3-209ENST00000540804 VSTM1Q6UX27 236 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms