RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 TNNT3P45378 269 aaPredicted RBP10.06□□□□□ -0.8
PAAF1-209ENST00000540659 BRCC3P46736 316 aa10.06□□□□□ -0.8
PAAF1-209ENST00000540659 GABRB2P47870 512 aa10.06□□□□□ -0.8
PAAF1-209ENST00000540659 CDK7P50613 346 aa10.06□□□□□ -0.8
PAAF1-209ENST00000540659 GUCY2DQ02846 1103 aa10.06□□□□□ -0.8
PAAF1-209ENST00000540659 PDE4CQ08493 712 aa10.06□□□□□ -0.8
PAAF1-209ENST00000540659 GRIK3Q13003 919 aa10.06□□□□□ -0.8
PAAF1-209ENST00000540659 ZNF268Q14587 947 aaPredicted RBP10.06□□□□□ -0.8
PAAF1-209ENST00000540659 UPP1Q16831 310 aa10.06□□□□□ -0.8
PAAF1-209ENST00000540659 CCDC142Q17RM4 750 aa10.06□□□□□ -0.8
PAAF1-209ENST00000540659 MDH1BQ5I0G3 518 aa10.06□□□□□ -0.8
PAAF1-209ENST00000540659 ARHGAP17Q68EM7 881 aa10.06□□□□□ -0.8
PAAF1-209ENST00000540659 PMF1Q6P1K2 205 aa10.06□□□□□ -0.8
PAAF1-209ENST00000540659 WDR93Q6P2C0 686 aa10.06□□□□□ -0.8
PAAF1-209ENST00000540659 SLC2A14Q8TDB8 520 aa10.06□□□□□ -0.8
PAAF1-209ENST00000540659 APBB2Q92870 758 aa10.06□□□□□ -0.8
PAAF1-209ENST00000540659 ACSF2Q96CM8 615 aaPredicted RBP10.06□□□□□ -0.8
PAAF1-209ENST00000540659 TNIP3Q96KP6 325 aa10.06□□□□□ -0.8
PAAF1-209ENST00000540659 TOX2Q96NM4 488 aa10.06□□□□□ -0.8
PAAF1-209ENST00000540659 NAP1L3Q99457 506 aaPredicted RBP10.06□□□□□ -0.8
PAAF1-209ENST00000540659 TRAIPQ9BWF2 469 aa10.06□□□□□ -0.8
PAAF1-209ENST00000540659 ZWILCHQ9H900 591 aa10.06□□□□□ -0.8
PAAF1-209ENST00000540659 ZNF446Q9NWS9 450 aa10.06□□□□□ -0.8
PAAF1-209ENST00000540659 TTC7AQ9ULT0 858 aaPredicted RBP10.06□□□□□ -0.8
PAAF1-209ENST00000540659 ZMYND8Q9ULU4 1186 aaPredicted RBP10.06□□□□□ -0.8
PAAF1-209ENST00000540659 NR2E1Q9Y466 385 aa10.06□□□□□ -0.8
PAAF1-209ENST00000540659 NR2E3Q9Y5X4 410 aa10.06□□□□□ -0.8
PAAF1-209ENST00000540659 TCRBV7S2A1N4TA0A589 114 aa10.05□□□□□ -0.8
PAAF1-209ENST00000540659 ESYT3A0FGR9 886 aa10.05□□□□□ -0.8
PAAF1-209ENST00000540659 CCDC151A5D8V7 595 aa10.05□□□□□ -0.8
PAAF1-209ENST00000540659 ZSCAN5CA6NGD5 496 aaPredicted RBP10.05□□□□□ -0.8
PAAF1-209ENST00000540659 C9IYK1 514 aa10.05□□□□□ -0.8
PAAF1-209ENST00000540659 PI4K2BG5E9Z4 385 aa10.05□□□□□ -0.8
PAAF1-209ENST00000540659 CLDN5O00501 218 aa10.05□□□□□ -0.8
PAAF1-209ENST00000540659 PITPNM1O00562 1244 aa10.05□□□□□ -0.8
PAAF1-209ENST00000540659 PSTPIP1O43586 416 aa10.05□□□□□ -0.8
PAAF1-209ENST00000540659 NBNO60934 754 aa10.05□□□□□ -0.8
PAAF1-209ENST00000540659 KRT1P04264 644 aa10.05□□□□□ -0.8
PAAF1-209ENST00000540659 MYBL2P10244 700 aa10.05□□□□□ -0.8
PAAF1-209ENST00000540659 SYN1P17600 705 aa10.05□□□□□ -0.8
PAAF1-209ENST00000540659 PTPN1P18031 435 aaKnown RBP10.05□□□□□ -0.8
PAAF1-209ENST00000540659 TKTP29401 623 aaKnown RBP10.05□□□□□ -0.8
PAAF1-209ENST00000540659 RPL9P32969 192 aaKnown RBP10.05□□□□□ -0.8
PAAF1-209ENST00000540659 CCL23P55773 120 aa10.05□□□□□ -0.8
PAAF1-209ENST00000540659 GSCP56915 257 aaPredicted RBP10.05□□□□□ -0.8
PAAF1-209ENST00000540659 BST2Q10589 180 aaKnown RBP10.05□□□□□ -0.8
PAAF1-209ENST00000540659 TUSC3Q13454 348 aa10.05□□□□□ -0.8
PAAF1-209ENST00000540659 PIGHQ14442 188 aaPredicted RBP10.05□□□□□ -0.8
PAAF1-209ENST00000540659 SMC1AQ14683 1233 aaKnown RBP10.05□□□□□ -0.8
PAAF1-209ENST00000540659 CLUL1Q15846 466 aa10.05□□□□□ -0.8
PAAF1-209ENST00000540659 CDO1Q16878 200 aa10.05□□□□□ -0.8
PAAF1-209ENST00000540659 ATP13A4Q4VNC1 1196 aa10.05□□□□□ -0.8
PAAF1-209ENST00000540659 TIGD5Q53EQ6 642 aa10.05□□□□□ -0.8
PAAF1-209ENST00000540659 GLE1Q53GS7 698 aaKnown RBP10.05□□□□□ -0.8
PAAF1-209ENST00000540659 ODF2Q5BJF6 829 aa10.05□□□□□ -0.8
PAAF1-209ENST00000540659 C1orf53Q5VUE5 145 aa10.05□□□□□ -0.8
PAAF1-209ENST00000540659 SLC24A5Q71RS6 500 aa10.05□□□□□ -0.8
PAAF1-209ENST00000540659 MTERF4Q7Z6M4 381 aaKnown RBP10.05□□□□□ -0.8
PAAF1-209ENST00000540659 ZNF598Q86UK7 904 aaKnown RBP10.05□□□□□ -0.8
PAAF1-209ENST00000540659 SLC13A5Q86YT5 568 aaPredicted RBP10.05□□□□□ -0.8
PAAF1-209ENST00000540659 CRYBG2Q8N1P7 616 aa10.05□□□□□ -0.8
PAAF1-209ENST00000540659 B3GALNT2Q8NCR0 500 aa10.05□□□□□ -0.8
PAAF1-209ENST00000540659 URGCPQ8TCY9 931 aa10.05□□□□□ -0.8
PAAF1-209ENST00000540659 CLEC4CQ8WTT0 213 aa10.05□□□□□ -0.8
PAAF1-209ENST00000540659 IFT81Q8WYA0 676 aa10.05□□□□□ -0.8
PAAF1-209ENST00000540659 RNF25Q96BH1 459 aaPredicted RBP10.05□□□□□ -0.8
PAAF1-209ENST00000540659 ZBTB9Q96C00 473 aa10.05□□□□□ -0.8
PAAF1-209ENST00000540659 MCRS1Q96EZ8 462 aa10.05□□□□□ -0.8
PAAF1-209ENST00000540659 DDX27Q96GQ7 796 aaKnown RBP10.05□□□□□ -0.8
PAAF1-209ENST00000540659 SCLYQ96I15 445 aa10.05□□□□□ -0.8
PAAF1-209ENST00000540659 PIWIL1Q96J94 861 aaKnown RBP10.05□□□□□ -0.8
PAAF1-209ENST00000540659 PLVAPQ9BX97 442 aa10.05□□□□□ -0.8
PAAF1-209ENST00000540659 PPP1R12CQ9BZL4 782 aa10.05□□□□□ -0.8
PAAF1-209ENST00000540659 EPB41L5Q9HCM4 733 aa10.05□□□□□ -0.8
PAAF1-209ENST00000540659 ARFGAP3Q9NP61 516 aa10.05□□□□□ -0.8
PAAF1-209ENST00000540659 STIM2Q9P246 746 aa10.05□□□□□ -0.8
PAAF1-209ENST00000540659 AMACRQ9UHK6 382 aa10.05□□□□□ -0.8
PAAF1-209ENST00000540659 LCMT1Q9UIC8 334 aa10.05□□□□□ -0.8
PAAF1-209ENST00000540659 TRIOBPQ9H2D6 2365 aa10.05□□□□□ -0.8
PAAF1-209ENST00000540659 F8W810 466 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 TTI1O43156 1089 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 SART1O43290 800 aaKnown RBP10.04□□□□□ -0.8
PAAF1-209ENST00000540659 HOXA2O43364 376 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 PHF2O75151 1096 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 B3GAT3O94766 335 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 DDHD2O94830 711 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 EOMESO95936 686 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 TUBBP07437 444 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 GLI1P08151 1106 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 FAM163BP0C2L3 166 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 SETSIPP0DME0 302 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 ODC1P11926 461 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 GPD1P21695 349 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 OR1G1P47890 313 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 LHX1P48742 406 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 RABGGTBP53611 331 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 BCAT1P54687 386 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 SNX16P57768 344 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 MAP9Q49MG5 647 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 PKDCCQ504Y2 493 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms