RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 SPEM1Q8N4L4 309 aa14.02□□□□□ -0.17
SEMA4D-223ENST00000540475 MAB21L3Q8N8X9 362 aa14.02□□□□□ -0.17
SEMA4D-223ENST00000540475 RIN3Q8TB24 985 aa14.02□□□□□ -0.17
SEMA4D-223ENST00000540475 PLEKHO2Q8TD55 490 aa14.02□□□□□ -0.17
SEMA4D-223ENST00000540475 PARD3BQ8TEW8 1205 aa14.02□□□□□ -0.17
SEMA4D-223ENST00000540475 MRPS31Q92665 395 aaKnown RBP14.02□□□□□ -0.17
SEMA4D-223ENST00000540475 CHFRQ96EP1 664 aa14.02□□□□□ -0.17
SEMA4D-223ENST00000540475 PCED1BQ96HM7 432 aa14.02□□□□□ -0.17
SEMA4D-223ENST00000540475 SYT15Q9BQS2 421 aa14.02□□□□□ -0.17
SEMA4D-223ENST00000540475 TTLL2Q9BWV7 592 aa14.02□□□□□ -0.17
SEMA4D-223ENST00000540475 HPS4Q9NQG7 708 aa14.02□□□□□ -0.17
SEMA4D-223ENST00000540475 GKN1Q9NS71 199 aa14.02□□□□□ -0.17
SEMA4D-223ENST00000540475 GCNT4Q9P109 453 aa14.02□□□□□ -0.17
SEMA4D-223ENST00000540475 CCL26Q9Y258 94 aa14.02□□□□□ -0.17
SEMA4D-223ENST00000540475 A0A1B0GVL5 298 aa14.01□□□□□ -0.17
SEMA4D-223ENST00000540475 PDXKO00764 312 aa14.01□□□□□ -0.17
SEMA4D-223ENST00000540475 C4BPAP04003 597 aaKnown RBP14.01□□□□□ -0.17
SEMA4D-223ENST00000540475 GNL1P36915 607 aaPredicted RBP14.01□□□□□ -0.17
SEMA4D-223ENST00000540475 AVPR1AP37288 418 aa14.01□□□□□ -0.17
SEMA4D-223ENST00000540475 SOX9P48436 509 aa14.01□□□□□ -0.17
SEMA4D-223ENST00000540475 NRLP54845 237 aa14.01□□□□□ -0.17
SEMA4D-223ENST00000540475 NOP14P78316 857 aaKnown RBP14.01□□□□□ -0.17
SEMA4D-223ENST00000540475 TNK2Q07912 1038 aa14.01□□□□□ -0.17
SEMA4D-223ENST00000540475 ITPRIPL2Q3MIP1 535 aa14.01□□□□□ -0.17
SEMA4D-223ENST00000540475 KMT5BQ4FZB7 885 aa14.01□□□□□ -0.17
SEMA4D-223ENST00000540475 TSSK4Q6SA08 328 aa14.01□□□□□ -0.17
SEMA4D-223ENST00000540475 KIAA1958Q8N8K9 716 aa14.01□□□□□ -0.17
SEMA4D-223ENST00000540475 ATRIPQ8WXE1 791 aa14.01□□□□□ -0.17
SEMA4D-223ENST00000540475 RUBCNQ92622 972 aa14.01□□□□□ -0.17
SEMA4D-223ENST00000540475 MYLPFQ96A32 169 aa14.01□□□□□ -0.17
SEMA4D-223ENST00000540475 CCDC127Q96BQ5 260 aa14.01□□□□□ -0.17
SEMA4D-223ENST00000540475 C8orf48Q96LL4 319 aa14.01□□□□□ -0.17
SEMA4D-223ENST00000540475 MRPL45Q9BRJ2 306 aaKnown RBP14.01□□□□□ -0.17
SEMA4D-223ENST00000540475 SMG9Q9H0W8 520 aaKnown RBP14.01□□□□□ -0.17
SEMA4D-223ENST00000540475 MAGED2Q9UNF1 606 aaPredicted RBP14.01□□□□□ -0.17
SEMA4D-223ENST00000540475 GPR179Q6PRD1 2367 aa14□□□□□ -0.17
SEMA4D-223ENST00000540475 OTOL1A6NHN0 477 aaPredicted RBP14□□□□□ -0.17
SEMA4D-223ENST00000540475 EXOC3O60645 756 aa14□□□□□ -0.17
SEMA4D-223ENST00000540475 HOXA6P31267 233 aa14□□□□□ -0.17
SEMA4D-223ENST00000540475 CXCL12P48061 93 aa14□□□□□ -0.17
SEMA4D-223ENST00000540475 PSMC1P62191 440 aaKnown RBP14□□□□□ -0.17
SEMA4D-223ENST00000540475 KRT85P78386 507 aa14□□□□□ -0.17
SEMA4D-223ENST00000540475 FAM160A1Q05DH4 1040 aa14□□□□□ -0.17
SEMA4D-223ENST00000540475 RUNX3Q13761 415 aa14□□□□□ -0.17
SEMA4D-223ENST00000540475 PPP2R5DQ14738 602 aa14□□□□□ -0.17
SEMA4D-223ENST00000540475 ZNF77Q15935 545 aa14□□□□□ -0.17
SEMA4D-223ENST00000540475 NFIL3Q16649 462 aa14□□□□□ -0.17
SEMA4D-223ENST00000540475 WDR72Q3MJ13 1102 aa14□□□□□ -0.17
SEMA4D-223ENST00000540475 SPRYD3Q8NCJ5 442 aa14□□□□□ -0.17
SEMA4D-223ENST00000540475 STKLD1Q8NE28 680 aa14□□□□□ -0.17
SEMA4D-223ENST00000540475 SYAP1Q96A49 352 aaPredicted RBP14□□□□□ -0.17
SEMA4D-223ENST00000540475 SPATA32Q96LK8 384 aa14□□□□□ -0.17
SEMA4D-223ENST00000540475 SLC22A12Q96S37 553 aa14□□□□□ -0.17
SEMA4D-223ENST00000540475 MMS19Q96T76 1030 aa14□□□□□ -0.17
SEMA4D-223ENST00000540475 TRAF3IP3Q9Y228 551 aa14□□□□□ -0.17
SEMA4D-223ENST00000540475 ATG2BQ96BY7 2078 aa13.99□□□□□ -0.17
SEMA4D-223ENST00000540475 A0A1W2PQ27 194 aa13.99□□□□□ -0.17
SEMA4D-223ENST00000540475 A0A1W2PQ64 194 aa13.99□□□□□ -0.17
SEMA4D-223ENST00000540475 A0A1W2PQD8 194 aa13.99□□□□□ -0.17
SEMA4D-223ENST00000540475 LRRIQ3A6PVS8 624 aaPredicted RBP13.99□□□□□ -0.17
SEMA4D-223ENST00000540475 K7ESF4 209 aa13.99□□□□□ -0.17
SEMA4D-223ENST00000540475 TRDMT1O14717 391 aaKnown RBP13.99□□□□□ -0.17
SEMA4D-223ENST00000540475 IKBKBO14920 756 aa13.99□□□□□ -0.17
SEMA4D-223ENST00000540475 TRIM66O15016 1216 aa13.99□□□□□ -0.17
SEMA4D-223ENST00000540475 MAPK13O15264 365 aa13.99□□□□□ -0.17
SEMA4D-223ENST00000540475 RHOBTB3O94955 611 aa13.99□□□□□ -0.17
SEMA4D-223ENST00000540475 PDGFRBP09619 1106 aa13.99□□□□□ -0.17
SEMA4D-223ENST00000540475 USP17L7P0C7H9 530 aa13.99□□□□□ -0.17
SEMA4D-223ENST00000540475 PTPN1P18031 435 aaKnown RBP13.99□□□□□ -0.17
SEMA4D-223ENST00000540475 BDNFP23560 247 aa13.99□□□□□ -0.17
SEMA4D-223ENST00000540475 PPP3CCP48454 512 aa13.99□□□□□ -0.17
SEMA4D-223ENST00000540475 CASP4P49662 377 aa13.99□□□□□ -0.17
SEMA4D-223ENST00000540475 MYL6P60660 151 aa13.99□□□□□ -0.17
SEMA4D-223ENST00000540475 SATB1Q01826 763 aa13.99□□□□□ -0.17
SEMA4D-223ENST00000540475 ENPEPQ07075 957 aa13.99□□□□□ -0.17
SEMA4D-223ENST00000540475 PDGFRLQ15198 375 aa13.99□□□□□ -0.17
SEMA4D-223ENST00000540475 TMEM196Q5HYL7 178 aa13.99□□□□□ -0.17
SEMA4D-223ENST00000540475 TDRD10Q5VZ19 366 aaKnown RBP13.99□□□□□ -0.17
SEMA4D-223ENST00000540475 DENND5BQ6ZUT9 1274 aa13.99□□□□□ -0.17
SEMA4D-223ENST00000540475 FSIP1Q8NA03 581 aa13.99□□□□□ -0.17
SEMA4D-223ENST00000540475 TMC2Q8TDI7 906 aa13.99□□□□□ -0.17
SEMA4D-223ENST00000540475 SCAND2PQ9GZW5 306 aaPredicted RBP13.99□□□□□ -0.17
SEMA4D-223ENST00000540475 SNX25Q9H3E2 840 aa13.99□□□□□ -0.17
SEMA4D-223ENST00000540475 EXOC1Q9NV70 894 aa13.99□□□□□ -0.17
SEMA4D-223ENST00000540475 EHD2Q9NZN4 543 aa13.99□□□□□ -0.17
SEMA4D-223ENST00000540475 MYH10P35580 1976 aa13.99□□□□□ -0.17
SEMA4D-223ENST00000540475 CACNA1AO00555 2505 aa13.99□□□□□ -0.17
SEMA4D-223ENST00000540475 EML5Q05BV3 1969 aa13.98□□□□□ -0.17
SEMA4D-223ENST00000540475 TRAV19A0A0A6YYK7 116 aa13.98□□□□□ -0.17
SEMA4D-223ENST00000540475 TULP1O00294 542 aaPredicted RBP13.98□□□□□ -0.17
SEMA4D-223ENST00000540475 VNN1O95497 513 aa13.98□□□□□ -0.17
SEMA4D-223ENST00000540475 OLFM2O95897 454 aa13.98□□□□□ -0.17
SEMA4D-223ENST00000540475 RPN1P04843 607 aaKnown RBP13.98□□□□□ -0.17
SEMA4D-223ENST00000540475 GRIK1P39086 918 aa13.98□□□□□ -0.17
SEMA4D-223ENST00000540475 SYKP43405 635 aa13.98□□□□□ -0.17
SEMA4D-223ENST00000540475 PDE6CP51160 858 aa13.98□□□□□ -0.17
SEMA4D-223ENST00000540475 NDUFA8P51970 172 aa13.98□□□□□ -0.17
SEMA4D-223ENST00000540475 USP46P62068 366 aa13.98□□□□□ -0.17
SEMA4D-223ENST00000540475 TNNC1P63316 161 aa13.98□□□□□ -0.17
SEMA4D-223ENST00000540475 DPYDQ12882 1025 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms