RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 TBC1D7Q9P0N9 293 aa13.38□□□□□ -0.27
COPS7A-211ENST00000540408 MAGEC2Q9UBF1 373 aaPredicted RBP13.38□□□□□ -0.27
COPS7A-211ENST00000540408 KMT2BQ9UMN6 2715 aaPredicted RBP13.37□□□□□ -0.27
COPS7A-211ENST00000540408 KHNYNO15037 678 aaKnown RBP13.37□□□□□ -0.27
COPS7A-211ENST00000540408 DCLK1O15075 740 aa13.37□□□□□ -0.27
COPS7A-211ENST00000540408 TADA3O75528 432 aa13.37□□□□□ -0.27
COPS7A-211ENST00000540408 PPP1R37O75864 691 aa13.37□□□□□ -0.27
COPS7A-211ENST00000540408 IDEP14735 1019 aa13.37□□□□□ -0.27
COPS7A-211ENST00000540408 PFKLP17858 780 aa13.37□□□□□ -0.27
COPS7A-211ENST00000540408 ANXA13P27216 316 aa13.37□□□□□ -0.27
COPS7A-211ENST00000540408 GRIK1P39086 918 aa13.37□□□□□ -0.27
COPS7A-211ENST00000540408 MAGEA11P43364 429 aa13.37□□□□□ -0.27
COPS7A-211ENST00000540408 NOVA1P51513 510 aaKnown RBP13.37□□□□□ -0.27
COPS7A-211ENST00000540408 USP4Q13107 963 aa13.37□□□□□ -0.27
COPS7A-211ENST00000540408 SURF1Q15526 300 aa13.37□□□□□ -0.27
COPS7A-211ENST00000540408 TCEAL6Q6IPX3 200 aa13.37□□□□□ -0.27
COPS7A-211ENST00000540408 VSTM1Q6UX27 236 aa13.37□□□□□ -0.27
COPS7A-211ENST00000540408 TCEAL3Q969E4 200 aa13.37□□□□□ -0.27
COPS7A-211ENST00000540408 EPSTI1Q96J88 318 aa13.37□□□□□ -0.27
COPS7A-211ENST00000540408 CEP295NLQ96MC4 621 aa13.37□□□□□ -0.27
COPS7A-211ENST00000540408 SLC22A12Q96S37 553 aa13.37□□□□□ -0.27
COPS7A-211ENST00000540408 STRA6Q9BX79 667 aa13.37□□□□□ -0.27
COPS7A-211ENST00000540408 IKZF4Q9H2S9 585 aa13.37□□□□□ -0.27
COPS7A-211ENST00000540408 LINC00597Q9H2U6 94 aa13.37□□□□□ -0.27
COPS7A-211ENST00000540408 UPF2Q9HAU5 1272 aaKnown RBP13.37□□□□□ -0.27
COPS7A-211ENST00000540408 TRPM5Q9NZQ8 1165 aa13.37□□□□□ -0.27
COPS7A-211ENST00000540408 ARHGAP26Q9UNA1 814 aa13.37□□□□□ -0.27
COPS7A-211ENST00000540408 SDK1Q7Z5N4 2213 aa13.37□□□□□ -0.27
COPS7A-211ENST00000540408 SPAG17Q6Q759 2223 aa13.36□□□□□ -0.27
COPS7A-211ENST00000540408 GOLGA8IPA6NC78 632 aa13.36□□□□□ -0.27
COPS7A-211ENST00000540408 C2orf78A6NCI8 922 aa13.36□□□□□ -0.27
COPS7A-211ENST00000540408 MYMKA6NI61 221 aa13.36□□□□□ -0.27
COPS7A-211ENST00000540408 GOLGA8JA6NMD2 632 aa13.36□□□□□ -0.27
COPS7A-211ENST00000540408 C4orf47A7E2U8 309 aa13.36□□□□□ -0.27
COPS7A-211ENST00000540408 SLC9A3R1O14745 358 aaPredicted RBP13.36□□□□□ -0.27
COPS7A-211ENST00000540408 GABRDO14764 452 aa13.36□□□□□ -0.27
COPS7A-211ENST00000540408 KIAA0391O15091 583 aaKnown RBP13.36□□□□□ -0.27
COPS7A-211ENST00000540408 ALDH1A2O94788 518 aa13.36□□□□□ -0.27
COPS7A-211ENST00000540408 TNNC2P02585 160 aa13.36□□□□□ -0.27
COPS7A-211ENST00000540408 TCF3P15923 654 aa13.36□□□□□ -0.27
COPS7A-211ENST00000540408 PPP3CCP48454 512 aa13.36□□□□□ -0.27
COPS7A-211ENST00000540408 KCNA1Q09470 495 aa13.36□□□□□ -0.27
COPS7A-211ENST00000540408 C2orf27AQ580R0 203 aa13.36□□□□□ -0.27
COPS7A-211ENST00000540408 NAIF1Q69YI7 327 aaPredicted RBP13.36□□□□□ -0.27
COPS7A-211ENST00000540408 DENND5BQ6ZUT9 1274 aa13.36□□□□□ -0.27
COPS7A-211ENST00000540408 STXBP4Q6ZWJ1 553 aa13.36□□□□□ -0.27
COPS7A-211ENST00000540408 GPD1LQ8N335 351 aa13.36□□□□□ -0.27
COPS7A-211ENST00000540408 HPDLQ96IR7 371 aa13.36□□□□□ -0.27
COPS7A-211ENST00000540408 SPATA17Q96L03 361 aa13.36□□□□□ -0.27
COPS7A-211ENST00000540408 PKMYT1Q99640 499 aa13.36□□□□□ -0.27
COPS7A-211ENST00000540408 SYT15Q9BQS2 421 aa13.36□□□□□ -0.27
COPS7A-211ENST00000540408 PCIF1Q9H4Z3 704 aa13.36□□□□□ -0.27
COPS7A-211ENST00000540408 PDE11AQ9HCR9 933 aa13.36□□□□□ -0.27
COPS7A-211ENST00000540408 TMEM9BQ9NQ34 198 aa13.36□□□□□ -0.27
COPS7A-211ENST00000540408 OLFML3Q9NRN5 406 aa13.36□□□□□ -0.27
COPS7A-211ENST00000540408 GCNT4Q9P109 453 aa13.36□□□□□ -0.27
COPS7A-211ENST00000540408 CDH9Q9ULB4 789 aa13.36□□□□□ -0.27
COPS7A-211ENST00000540408 INVSQ9Y283 1065 aa13.36□□□□□ -0.27
COPS7A-211ENST00000540408 DENND4CQ5VZ89 1909 aa13.36□□□□□ -0.27
COPS7A-211ENST00000540408 ATG2BQ96BY7 2078 aa13.36□□□□□ -0.27
COPS7A-211ENST00000540408 PROS1P07225 676 aa13.35□□□□□ -0.27
COPS7A-211ENST00000540408 BDNFP23560 247 aa13.35□□□□□ -0.27
COPS7A-211ENST00000540408 SEC13P55735 322 aa13.35□□□□□ -0.27
COPS7A-211ENST00000540408 WNT7BP56706 349 aa13.35□□□□□ -0.27
COPS7A-211ENST00000540408 MRPS21P82921 87 aaKnown RBP13.35□□□□□ -0.27
COPS7A-211ENST00000540408 CYP27A1Q02318 531 aa13.35□□□□□ -0.27
COPS7A-211ENST00000540408 SOWAHAQ2M3V2 549 aa13.35□□□□□ -0.27
COPS7A-211ENST00000540408 PMS2CLQ68D20 193 aa13.35□□□□□ -0.27
COPS7A-211ENST00000540408 ANO7Q6IWH7 933 aa13.35□□□□□ -0.27
COPS7A-211ENST00000540408 FAM171BQ6P995 826 aa13.35□□□□□ -0.27
COPS7A-211ENST00000540408 CCDC73Q6ZRK6 1079 aa13.35□□□□□ -0.27
COPS7A-211ENST00000540408 CYP2U1Q7Z449 544 aa13.35□□□□□ -0.27
COPS7A-211ENST00000540408 OSTM1Q86WC4 334 aa13.35□□□□□ -0.27
COPS7A-211ENST00000540408 TTC30AQ86WT1 665 aa13.35□□□□□ -0.27
COPS7A-211ENST00000540408 KIAA1958Q8N8K9 716 aa13.35□□□□□ -0.27
COPS7A-211ENST00000540408 USP33Q8TEY7 942 aa13.35□□□□□ -0.27
COPS7A-211ENST00000540408 EZH1Q92800 747 aaPredicted RBP13.35□□□□□ -0.27
COPS7A-211ENST00000540408 MMS19Q96T76 1030 aa13.35□□□□□ -0.27
COPS7A-211ENST00000540408 TPSD1Q9BZJ3 242 aa13.35□□□□□ -0.27
COPS7A-211ENST00000540408 MTMR12Q9C0I1 747 aa13.35□□□□□ -0.27
COPS7A-211ENST00000540408 PANK4Q9NVE7 773 aa13.35□□□□□ -0.27
COPS7A-211ENST00000540408 SRPRBQ9Y5M8 271 aaKnown RBP13.35□□□□□ -0.27
COPS7A-211ENST00000540408 LNP1A1A4G5 178 aa13.34□□□□□ -0.27
COPS7A-211ENST00000540408 VPS37CA5D8V6 355 aaPredicted RBP13.34□□□□□ -0.27
COPS7A-211ENST00000540408 ZNF233A6NK53 670 aa13.34□□□□□ -0.27
COPS7A-211ENST00000540408 K7EQS6 105 aa13.34□□□□□ -0.27
COPS7A-211ENST00000540408 LEFTY2O00292 366 aa13.34□□□□□ -0.27
COPS7A-211ENST00000540408 TRIM66O15016 1216 aa13.34□□□□□ -0.27
COPS7A-211ENST00000540408 MAP3K13O43283 966 aa13.34□□□□□ -0.27
COPS7A-211ENST00000540408 ABL1P00519 1130 aa13.34□□□□□ -0.27
COPS7A-211ENST00000540408 CEACAM1P13688 526 aa13.34□□□□□ -0.27
COPS7A-211ENST00000540408 PDCP20941 246 aa13.34□□□□□ -0.27
COPS7A-211ENST00000540408 DHPSP49366 369 aaPredicted RBP13.34□□□□□ -0.27
COPS7A-211ENST00000540408 BYSLQ13895 437 aaKnown RBP13.34□□□□□ -0.27
COPS7A-211ENST00000540408 CRY1Q16526 586 aa13.34□□□□□ -0.27
COPS7A-211ENST00000540408 DUOXA2Q1HG44 320 aa13.34□□□□□ -0.27
COPS7A-211ENST00000540408 C8orf34Q49A92 452 aa13.34□□□□□ -0.27
COPS7A-211ENST00000540408 SH3PXD2AQ5TCZ1 1133 aa13.34□□□□□ -0.27
COPS7A-211ENST00000540408 LMBRD2Q68DH5 695 aaPredicted RBP13.34□□□□□ -0.27
COPS7A-211ENST00000540408 USP49Q70CQ1 688 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms