RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 BACE2Q9Y5Z0 518 aa6.92□□□□□ -1.3
SNHG1-212ENST00000539975 CDY1Q9Y6F8 540 aa6.92□□□□□ -1.3
SNHG1-212ENST00000539975 SIP14410 1827 aa6.92□□□□□ -1.3
SNHG1-212ENST00000539975 TTC3P53804 2025 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 TNRC18O15417 2968 aaPredicted RBP6.91□□□□□ -1.3
SNHG1-212ENST00000539975 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.91□□□□□ -1.3
SNHG1-212ENST00000539975 EPOPA6NHQ4 379 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 HIDE1A8MVS5 230 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 A8MXQ7 604 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 F8W810 466 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 FSCN2O14926 492 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 PER2O15055 1255 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 MEFVO15553 781 aaPredicted RBP6.91□□□□□ -1.3
SNHG1-212ENST00000539975 OAZ2O95190 189 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 C1RP00736 705 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 HLA-DRAP01903 254 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 CNPP09543 421 aaKnown RBP6.91□□□□□ -1.3
SNHG1-212ENST00000539975 HOXB8P17481 243 aaPredicted RBP6.91□□□□□ -1.3
SNHG1-212ENST00000539975 DNAJB1P25685 340 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 IRS1P35568 1242 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 ALDH1A3P47895 512 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 AARSP49588 968 aaKnown RBP eCLIP6.91□□□□□ -1.35e-21■□□□□ 9.8
SNHG1-212ENST00000539975 SLC8A3P57103 927 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 TNP2Q05952 138 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 PPP3CAQ08209 521 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 NFE2Q16621 373 aaPredicted RBP6.91□□□□□ -1.3
SNHG1-212ENST00000539975 VWA3BQ502W6 1294 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 HSP90AA4PQ58FG1 418 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 RTP2Q5QGT7 225 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 WSCD1Q658N2 575 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 TPGS2Q68CL5 300 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 PRSS55Q6UWB4 352 aaPredicted RBP6.91□□□□□ -1.3
SNHG1-212ENST00000539975 C4orf50Q6ZRC1 276 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 RTL10Q7L3V2 364 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 TRIM59Q8IWR1 403 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 EFHBQ8N7U6 833 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 C3orf58Q8NDZ4 430 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 ZNF461Q8TAF7 563 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 LNX1Q8TBB1 728 aaPredicted RBP6.91□□□□□ -1.3
SNHG1-212ENST00000539975 C2orf15Q8WU43 125 aaKnown RBP6.91□□□□□ -1.3
SNHG1-212ENST00000539975 HDAC7Q8WUI4 952 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 BCL7CQ8WUZ0 217 aaPredicted RBP6.91□□□□□ -1.3
SNHG1-212ENST00000539975 AUTS2Q8WXX7 1259 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 SLC35C1Q96A29 364 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 PABPC5Q96DU9 382 aaKnown RBP6.91□□□□□ -1.3
SNHG1-212ENST00000539975 ABHD17AQ96GS6 310 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 GUCD1Q96NT3 240 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 KLHL5Q96PQ7 755 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 ACBD6Q9BR61 282 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 PHACTR1Q9C0D0 580 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 NDST4Q9H3R1 872 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 PLEKHA4Q9H4M7 779 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 FAM124BQ9H5Z6 455 aaPredicted RBP6.91□□□□□ -1.3
SNHG1-212ENST00000539975 CYP3A43Q9HB55 503 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 PIDD1Q9HB75 910 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 RXFP1Q9HBX9 757 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 ENAMQ9NRM1 1142 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 SAMSN1Q9NSI8 373 aaKnown RBP6.91□□□□□ -1.3
SNHG1-212ENST00000539975 FANCLQ9NW38 375 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 DDX43Q9NXZ2 648 aaKnown RBP6.91□□□□□ -1.3
SNHG1-212ENST00000539975 MTRRQ9UBK8 725 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 HCN4Q9Y3Q4 1203 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 TCHHQ07283 1943 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 MICAL3Q7RTP6 2002 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 TET1Q8NFU7 2136 aa6.91□□□□□ -1.3
SNHG1-212ENST00000539975 PPEF2O14830 753 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 PMM2O15305 246 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 TEX28O15482 410 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 CLASP2O75122 1294 aaKnown RBP6.9□□□□□ -1.3
SNHG1-212ENST00000539975 XYLBO75191 536 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 TACC1O75410 805 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 ASS1P00966 412 aaKnown RBP6.9□□□□□ -1.3
SNHG1-212ENST00000539975 LRG1P02750 347 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 CYP11A1P05108 521 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 RPL17P18621 184 aaKnown RBP6.9□□□□□ -1.3
SNHG1-212ENST00000539975 TUFMP49411 452 aaKnown RBP6.9□□□□□ -1.3
SNHG1-212ENST00000539975 MFAP3P55082 362 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 NOP14P78316 857 aaKnown RBP6.9□□□□□ -1.3
SNHG1-212ENST00000539975 PLD1Q13393 1074 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 RAB33AQ14088 237 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 ADGRE1Q14246 886 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 VEPH1Q14D04 833 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 DUSP6Q16828 381 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 EXOC3L4Q17RC7 722 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 SOWAHAQ2M3V2 549 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 UVSSAQ2YD98 709 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 PPM1LQ5SGD2 360 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 SH3PXD2AQ5TCZ1 1133 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 ZNF385CQ66K41 422 aaPredicted RBP6.9□□□□□ -1.3
SNHG1-212ENST00000539975 IQCEQ6IPM2 695 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 SLC8B1Q6J4K2 584 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 LRSAM1Q6UWE0 723 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 C11orf57Q6ZUT1 292 aaPredicted RBP6.9□□□□□ -1.3
SNHG1-212ENST00000539975 ENOSF1Q7L5Y1 443 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 SPATA2LQ8IUW3 424 aaPredicted RBP6.9□□□□□ -1.3
SNHG1-212ENST00000539975 ALDH16A1Q8IZ83 802 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 PPM1KQ8N3J5 372 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 PDCL2Q8N4E4 241 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 SVOPQ8N4V2 548 aa6.9□□□□□ -1.3
SNHG1-212ENST00000539975 KREMEN2Q8NCW0 462 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms