RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 KRT3P12035 628 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 BST2Q10589 180 aaKnown RBP17.8■□□□□ 0.44
COPS3-212ENST00000539941 NOMO2Q5JPE7 1267 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 DCLRE1AQ6PJP8 1040 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 C10orf67Q8IYJ2 551 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 ANKLE1Q8NAG6 615 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 B3GALNT2Q8NCR0 500 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 C3orf58Q8NDZ4 430 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 DBF4BQ8NFT6 615 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 SLC35F5Q8WV83 523 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 PPM1EQ8WY54 764 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 RSPH1Q8WYR4 309 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 RUBCNQ92622 972 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 RNPC3Q96LT9 517 aaKnown RBP17.8■□□□□ 0.44
COPS3-212ENST00000539941 MCEEQ96PE7 176 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 SLC4A5Q9BY07 1137 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 ANKZF1Q9H8Y5 726 aa17.8■□□□□ 0.44
COPS3-212ENST00000539941 RNF216Q9NWF9 866 aaPredicted RBP17.8■□□□□ 0.44
COPS3-212ENST00000539941 CXCL10P02778 98 aa17.79■□□□□ 0.44
COPS3-212ENST00000539941 MCM3P25205 808 aa17.79■□□□□ 0.44
COPS3-212ENST00000539941 RPL7AP62424 266 aaKnown RBP17.79■□□□□ 0.44
COPS3-212ENST00000539941 DSC1Q08554 894 aa17.79■□□□□ 0.44
COPS3-212ENST00000539941 GLE1Q53GS7 698 aaKnown RBP17.79■□□□□ 0.44
COPS3-212ENST00000539941 CLLU1OSQ5K130 101 aa17.79■□□□□ 0.44
COPS3-212ENST00000539941 SEL1L2Q5TEA6 688 aa17.79■□□□□ 0.44
COPS3-212ENST00000539941 ZDHHC17Q8IUH5 632 aa17.79■□□□□ 0.44
COPS3-212ENST00000539941 HNRNPABQ99729 332 aaKnown RBP17.79■□□□□ 0.44
COPS3-212ENST00000539941 FAM107BQ9H098 131 aa17.79■□□□□ 0.44
COPS3-212ENST00000539941 HIPK3Q9H422 1215 aa17.79■□□□□ 0.44
COPS3-212ENST00000539941 RBM12Q9NTZ6 932 aaKnown RBP17.79■□□□□ 0.44
COPS3-212ENST00000539941 M0QZQ0 153 aa17.78■□□□□ 0.44
COPS3-212ENST00000539941 ENPP3O14638 875 aa17.78■□□□□ 0.44
COPS3-212ENST00000539941 B3GAT3O94766 335 aa17.78■□□□□ 0.44
COPS3-212ENST00000539941 CYP11A1P05108 521 aa17.78■□□□□ 0.44
COPS3-212ENST00000539941 PTPN1P18031 435 aaKnown RBP17.78■□□□□ 0.44
COPS3-212ENST00000539941 IBSPP21815 317 aaPredicted RBP17.78■□□□□ 0.44
COPS3-212ENST00000539941 PCSK1P29120 753 aa17.78■□□□□ 0.44
COPS3-212ENST00000539941 OAS2P29728 719 aaKnown RBP17.78■□□□□ 0.44
COPS3-212ENST00000539941 MARCKSL1P49006 195 aa17.78■□□□□ 0.44
COPS3-212ENST00000539941 RPL34P49207 117 aaKnown RBP17.78■□□□□ 0.44
COPS3-212ENST00000539941 PSEN1P49768 467 aa17.78■□□□□ 0.44
COPS3-212ENST00000539941 ATN1P54259 1190 aaPredicted RBP17.78■□□□□ 0.44
COPS3-212ENST00000539941 SMC1AQ14683 1233 aaKnown RBP17.78■□□□□ 0.44
COPS3-212ENST00000539941 PPP2R5EQ16537 467 aa17.78■□□□□ 0.44
COPS3-212ENST00000539941 TIGD5Q53EQ6 642 aa17.78■□□□□ 0.44
COPS3-212ENST00000539941 TMEM110Q86TL2 294 aa17.78■□□□□ 0.44
COPS3-212ENST00000539941 SUGP1Q8IWZ8 645 aaKnown RBP17.78■□□□□ 0.44
COPS3-212ENST00000539941 RHOT1Q8IXI2 618 aa17.78■□□□□ 0.44
COPS3-212ENST00000539941 PAAF1Q9BRP4 392 aa17.78■□□□□ 0.44
COPS3-212ENST00000539941 PARD6BQ9BYG5 372 aa17.78■□□□□ 0.44
COPS3-212ENST00000539941 CACNG4Q9UBN1 327 aa17.78■□□□□ 0.44
COPS3-212ENST00000539941 RAB21Q9UL25 225 aa17.78■□□□□ 0.44
COPS3-212ENST00000539941 GOLGA8SH3BPF8 625 aa17.77■□□□□ 0.44
COPS3-212ENST00000539941 TMEM189-UBE2V1I3L0A0 370 aa17.77■□□□□ 0.44
COPS3-212ENST00000539941 HOXA2O43364 376 aa17.77■□□□□ 0.44
COPS3-212ENST00000539941 HCRTO43612 131 aa17.77■□□□□ 0.44
COPS3-212ENST00000539941 FGGP02679 453 aa17.77■□□□□ 0.44
COPS3-212ENST00000539941 RHOXF2BP0C7M4 288 aa17.77■□□□□ 0.44
COPS3-212ENST00000539941 CCDC130P13994 396 aa17.77■□□□□ 0.44
COPS3-212ENST00000539941 ACADSBP45954 432 aa17.77■□□□□ 0.44
COPS3-212ENST00000539941 FAAP100Q0VG06 881 aa17.77■□□□□ 0.44
COPS3-212ENST00000539941 LRRC38Q5VT99 294 aa17.77■□□□□ 0.44
COPS3-212ENST00000539941 CCDC91Q7Z6B0 441 aa17.77■□□□□ 0.44
COPS3-212ENST00000539941 METTL23Q86XA0 190 aa17.77■□□□□ 0.44
COPS3-212ENST00000539941 RHOXF2Q9BQY4 288 aa17.77■□□□□ 0.44
COPS3-212ENST00000539941 DDX43Q9NXZ2 648 aaKnown RBP17.77■□□□□ 0.44
COPS3-212ENST00000539941 TJP2Q9UDY2 1190 aa17.77■□□□□ 0.44
COPS3-212ENST00000539941 CDH9Q9ULB4 789 aa17.77■□□□□ 0.44
COPS3-212ENST00000539941 PCDHB7Q9Y5E2 793 aa17.77■□□□□ 0.44
COPS3-212ENST00000539941 E5RJQ4 531 aa17.77■□□□□ 0.43
COPS3-212ENST00000539941 POLR3GO15318 223 aaPredicted RBP17.77■□□□□ 0.43
COPS3-212ENST00000539941 GJB6O95452 261 aa17.77■□□□□ 0.43
COPS3-212ENST00000539941 TYMPP19971 482 aa17.77■□□□□ 0.43
COPS3-212ENST00000539941 SCNN1AP37088 669 aa17.77■□□□□ 0.43
COPS3-212ENST00000539941 SLC8A3P57103 927 aa17.77■□□□□ 0.43
COPS3-212ENST00000539941 TLE2Q04725 743 aa17.77■□□□□ 0.43
COPS3-212ENST00000539941 ACAP1Q15027 740 aa17.77■□□□□ 0.43
COPS3-212ENST00000539941 BRD3Q15059 726 aa17.77■□□□□ 0.43
COPS3-212ENST00000539941 SWT1Q5T5J6 900 aaKnown RBP17.77■□□□□ 0.43
COPS3-212ENST00000539941 PMF1Q6P1K2 205 aa17.77■□□□□ 0.43
COPS3-212ENST00000539941 WDR93Q6P2C0 686 aa17.77■□□□□ 0.43
COPS3-212ENST00000539941 CD300LGQ6UXG3 332 aa17.77■□□□□ 0.43
COPS3-212ENST00000539941 CPNE8Q86YQ8 564 aa17.77■□□□□ 0.43
COPS3-212ENST00000539941 SLC2A14Q8TDB8 520 aa17.77■□□□□ 0.43
COPS3-212ENST00000539941 SUSD3Q96L08 255 aa17.77■□□□□ 0.43
COPS3-212ENST00000539941 HSFY1Q96LI6 401 aa17.77■□□□□ 0.43
COPS3-212ENST00000539941 SYT15Q9BQS2 421 aa17.77■□□□□ 0.43
COPS3-212ENST00000539941 TSC2P49815 1807 aa17.76■□□□□ 0.43
COPS3-212ENST00000539941 GOLGA6L10A0A0M3HER8 536 aa17.76■□□□□ 0.43
COPS3-212ENST00000539941 KRIT1O00522 736 aa17.76■□□□□ 0.43
COPS3-212ENST00000539941 IGFBP6P24592 240 aaPredicted RBP17.76■□□□□ 0.43
COPS3-212ENST00000539941 ADORA2BP29275 332 aa17.76■□□□□ 0.43
COPS3-212ENST00000539941 RFC1P35251 1148 aaPredicted RBP17.76■□□□□ 0.43
COPS3-212ENST00000539941 RNASE9P60153 205 aaKnown RBP17.76■□□□□ 0.43
COPS3-212ENST00000539941 PLCB3Q01970 1234 aa17.76■□□□□ 0.43
COPS3-212ENST00000539941 ZNF252P-AS1Q0IIN9 211 aa17.76■□□□□ 0.43
COPS3-212ENST00000539941 LONRF2Q1L5Z9 754 aa17.76■□□□□ 0.43
COPS3-212ENST00000539941 TRIM60Q495X7 471 aa17.76■□□□□ 0.43
COPS3-212ENST00000539941 FAM102AQ5T9C2 384 aaPredicted RBP17.76■□□□□ 0.43
COPS3-212ENST00000539941 KATNAL2Q8IYT4 538 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms