RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 WDR24Q96S15 920 aa17.07■□□□□ 0.32
TRAF3-204ENST00000539721 DUSP16Q9BY84 665 aa17.07■□□□□ 0.32
TRAF3-204ENST00000539721 ZCWPW1Q9H0M4 648 aa17.07■□□□□ 0.32
TRAF3-204ENST00000539721 KRT82Q9NSB4 513 aa17.07■□□□□ 0.32
TRAF3-204ENST00000539721 TMLHEQ9NVH6 421 aa17.07■□□□□ 0.32
TRAF3-204ENST00000539721 PCDHB12Q9Y5F1 795 aa17.07■□□□□ 0.32
TRAF3-204ENST00000539721 OR6C75A6NL08 312 aa17.07■□□□□ 0.32
TRAF3-204ENST00000539721 TULP2O00295 520 aa17.07■□□□□ 0.32
TRAF3-204ENST00000539721 OR4Q2P0C623 313 aa17.07■□□□□ 0.32
TRAF3-204ENST00000539721 NPR3P17342 541 aa17.07■□□□□ 0.32
TRAF3-204ENST00000539721 PPM1AP35813 382 aa17.07■□□□□ 0.32
TRAF3-204ENST00000539721 TCEAL1Q15170 157 aa17.07■□□□□ 0.32
TRAF3-204ENST00000539721 SLC39A12Q504Y0 691 aa17.07■□□□□ 0.32
TRAF3-204ENST00000539721 RASIP1Q5U651 963 aa17.07■□□□□ 0.32
TRAF3-204ENST00000539721 PMF1Q6P1K2 205 aa17.07■□□□□ 0.32
TRAF3-204ENST00000539721 ANKS3Q6ZW76 656 aa17.07■□□□□ 0.32
TRAF3-204ENST00000539721 RNF168Q8IYW5 571 aaPredicted RBP17.07■□□□□ 0.32
TRAF3-204ENST00000539721 ZNF564Q8TBZ8 553 aaPredicted RBP17.07■□□□□ 0.32
TRAF3-204ENST00000539721 SLC35F5Q8WV83 523 aa17.07■□□□□ 0.32
TRAF3-204ENST00000539721 C18orf8Q96DM3 657 aa17.07■□□□□ 0.32
TRAF3-204ENST00000539721 VN1R3Q9BXE9 311 aa17.07■□□□□ 0.32
TRAF3-204ENST00000539721 UVRAGQ9P2Y5 699 aa17.07■□□□□ 0.32
TRAF3-204ENST00000539721 TJP2Q9UDY2 1190 aa17.07■□□□□ 0.32
TRAF3-204ENST00000539721 COG5Q9UP83 839 aa17.07■□□□□ 0.32
TRAF3-204ENST00000539721 SCINQ9Y6U3 715 aa17.07■□□□□ 0.32
TRAF3-204ENST00000539721 PTPRDP23468 1912 aa17.07■□□□□ 0.32
TRAF3-204ENST00000539721 AP1G2O75843 785 aa17.06■□□□□ 0.32
TRAF3-204ENST00000539721 SOD2P04179 222 aa17.06■□□□□ 0.32
TRAF3-204ENST00000539721 ERBB2P04626 1255 aa17.06■□□□□ 0.32
TRAF3-204ENST00000539721 KIAA1841Q6NSI8 718 aa17.06■□□□□ 0.32
TRAF3-204ENST00000539721 C4orf50Q6ZRC1 276 aa17.06■□□□□ 0.32
TRAF3-204ENST00000539721 CLEC20AQ6ZU45 233 aa17.06■□□□□ 0.32
TRAF3-204ENST00000539721 SPATA2LQ8IUW3 424 aaPredicted RBP17.06■□□□□ 0.32
TRAF3-204ENST00000539721 TPCN2Q8NHX9 752 aa17.06■□□□□ 0.32
TRAF3-204ENST00000539721 SP7Q8TDD2 431 aaPredicted RBP17.06■□□□□ 0.32
TRAF3-204ENST00000539721 STK32AQ8WU08 396 aa17.06■□□□□ 0.32
TRAF3-204ENST00000539721 SMARCD1Q96GM5 515 aa17.06■□□□□ 0.32
TRAF3-204ENST00000539721 HERC2P3Q9BVR0 1158 aa17.06■□□□□ 0.32
TRAF3-204ENST00000539721 MIS12Q9H081 205 aa17.06■□□□□ 0.32
TRAF3-204ENST00000539721 MRPL47Q9HD33 250 aaKnown RBP17.06■□□□□ 0.32
TRAF3-204ENST00000539721 PIK3R2O00459 728 aa17.05■□□□□ 0.32
TRAF3-204ENST00000539721 XPO1O14980 1071 aaKnown RBP17.05■□□□□ 0.32
TRAF3-204ENST00000539721 PALMO75781 387 aa17.05■□□□□ 0.32
TRAF3-204ENST00000539721 MTA2O94776 668 aa17.05■□□□□ 0.32
TRAF3-204ENST00000539721 CASQ1P31415 396 aa17.05■□□□□ 0.32
TRAF3-204ENST00000539721 GABRB2P47870 512 aa17.05■□□□□ 0.32
TRAF3-204ENST00000539721 HADHBP55084 474 aaKnown RBP17.05■□□□□ 0.32
TRAF3-204ENST00000539721 SNX16P57768 344 aa17.05■□□□□ 0.32
TRAF3-204ENST00000539721 C9orf50Q5SZB4 431 aa17.05■□□□□ 0.32
TRAF3-204ENST00000539721 PLEKHA7Q6IQ23 1121 aa17.05■□□□□ 0.32
TRAF3-204ENST00000539721 DNAJC24Q6P3W2 148 aa17.05■□□□□ 0.32
TRAF3-204ENST00000539721 PRSS55Q6UWB4 352 aaPredicted RBP17.05■□□□□ 0.32
TRAF3-204ENST00000539721 RIN2Q8WYP3 895 aaPredicted RBP17.05■□□□□ 0.32
TRAF3-204ENST00000539721 CALR3Q96L12 384 aaKnown RBP17.05■□□□□ 0.32
TRAF3-204ENST00000539721 RNPC3Q96LT9 517 aaKnown RBP17.05■□□□□ 0.32
TRAF3-204ENST00000539721 SLC4A5Q9BY07 1137 aa17.05■□□□□ 0.32
TRAF3-204ENST00000539721 OXCT2Q9BYC2 517 aaPredicted RBP17.05■□□□□ 0.32
TRAF3-204ENST00000539721 PARVAQ9NVD7 372 aa17.05■□□□□ 0.32
TRAF3-204ENST00000539721 WDR35Q9P2L0 1181 aa17.05■□□□□ 0.32
TRAF3-204ENST00000539721 PCDHGC5Q9Y5F6 944 aa17.05■□□□□ 0.32
TRAF3-204ENST00000539721 GRID2IPA4D2P6 1211 aa17.05■□□□□ 0.32
TRAF3-204ENST00000539721 E5RJQ4 531 aa17.05■□□□□ 0.32
TRAF3-204ENST00000539721 GOLGA8SH3BPF8 625 aa17.05■□□□□ 0.32
TRAF3-204ENST00000539721 CAPN15O75808 1086 aa17.05■□□□□ 0.32
TRAF3-204ENST00000539721 BDNFP23560 247 aa17.05■□□□□ 0.32
TRAF3-204ENST00000539721 PLA2G4AP47712 749 aa17.05■□□□□ 0.32
TRAF3-204ENST00000539721 MAP3K7CLP57077 242 aa17.05■□□□□ 0.32
TRAF3-204ENST00000539721 ZNF268Q14587 947 aaPredicted RBP17.05■□□□□ 0.32
TRAF3-204ENST00000539721 DDX53Q86TM3 631 aaKnown RBP17.05■□□□□ 0.32
TRAF3-204ENST00000539721 XYLT1Q86Y38 959 aa17.05■□□□□ 0.32
TRAF3-204ENST00000539721 C3orf20Q8ND61 904 aa17.05■□□□□ 0.32
TRAF3-204ENST00000539721 KIF18AQ8NI77 898 aa17.05■□□□□ 0.32
TRAF3-204ENST00000539721 CLP1Q92989 425 aaKnown RBP17.05■□□□□ 0.32
TRAF3-204ENST00000539721 RHOBTB2Q9BYZ6 727 aa17.05■□□□□ 0.32
TRAF3-204ENST00000539721 CHST7Q9NS84 486 aa17.05■□□□□ 0.32
TRAF3-204ENST00000539721 LCHNA4D1U4 455 aa17.04■□□□□ 0.32
TRAF3-204ENST00000539721 BEST1O76090 585 aa17.04■□□□□ 0.32
TRAF3-204ENST00000539721 LINC00271P0C7V0 271 aa17.04■□□□□ 0.32
TRAF3-204ENST00000539721 CPB1P15086 417 aa17.04■□□□□ 0.32
TRAF3-204ENST00000539721 GLUD2P49448 558 aa17.04■□□□□ 0.32
TRAF3-204ENST00000539721 ARPP19P56211 112 aa17.04■□□□□ 0.32
TRAF3-204ENST00000539721 MAMLD1Q13495 774 aa17.04■□□□□ 0.32
TRAF3-204ENST00000539721 PSMD5Q16401 504 aa17.04■□□□□ 0.32
TRAF3-204ENST00000539721 NFE2Q16621 373 aaPredicted RBP17.04■□□□□ 0.32
TRAF3-204ENST00000539721 OR6B2Q6IFH4 312 aa17.04■□□□□ 0.32
TRAF3-204ENST00000539721 PIGZQ86VD9 579 aa17.04■□□□□ 0.32
TRAF3-204ENST00000539721 PIK3R5Q8WYR1 880 aa17.04■□□□□ 0.32
TRAF3-204ENST00000539721 HSFY1Q96LI6 401 aa17.04■□□□□ 0.32
TRAF3-204ENST00000539721 SMOQ99835 787 aa17.04■□□□□ 0.32
TRAF3-204ENST00000539721 SELENOOQ9BVL4 669 aa17.04■□□□□ 0.32
TRAF3-204ENST00000539721 CYLDQ9NQC7 956 aa17.04■□□□□ 0.32
TRAF3-204ENST00000539721 ANAPC7Q9UJX3 599 aa17.04■□□□□ 0.32
TRAF3-204ENST00000539721 GBF1Q92538 1859 aa17.04■□□□□ 0.32
TRAF3-204ENST00000539721 C2CD2LO14523 706 aa17.03■□□□□ 0.32
TRAF3-204ENST00000539721 TBC1D4O60343 1298 aa17.03■□□□□ 0.32
TRAF3-204ENST00000539721 BUB1BO60566 1050 aaPredicted RBP17.03■□□□□ 0.32
TRAF3-204ENST00000539721 FGF18O76093 207 aa17.03■□□□□ 0.32
TRAF3-204ENST00000539721 GJB6O95452 261 aa17.03■□□□□ 0.32
TRAF3-204ENST00000539721 LCP1P13796 627 aa17.03■□□□□ 0.32
TRAF3-204ENST00000539721 ACADSBP45954 432 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms