RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 PCGF5Q86SE9 256 aa10.7□□□□□ -0.7
SPARC-209ENST00000539687 SERINC5Q86VE9 423 aa10.7□□□□□ -0.7
SPARC-209ENST00000539687 OR6B3Q8NGW1 331 aa10.7□□□□□ -0.7
SPARC-209ENST00000539687 UBLCP1Q8WVY7 318 aaPredicted RBP10.7□□□□□ -0.7
SPARC-209ENST00000539687 HSFY1Q96LI6 401 aa10.7□□□□□ -0.7
SPARC-209ENST00000539687 TWNKQ96RR1 684 aa10.7□□□□□ -0.7
SPARC-209ENST00000539687 CPXM1Q96SM3 734 aa10.7□□□□□ -0.7
SPARC-209ENST00000539687 BEGAINQ9BUH8 593 aa10.7□□□□□ -0.7
SPARC-209ENST00000539687 CFHR5Q9BXR6 569 aa10.7□□□□□ -0.7
SPARC-209ENST00000539687 SEZ6LQ9BYH1 1024 aa10.7□□□□□ -0.7
SPARC-209ENST00000539687 PABPC3Q9H361 631 aaKnown RBP10.7□□□□□ -0.7
SPARC-209ENST00000539687 RSAD1Q9HA92 442 aa10.7□□□□□ -0.7
SPARC-209ENST00000539687 PRDM16Q9HAZ2 1276 aa10.7□□□□□ -0.7
SPARC-209ENST00000539687 METTL5Q9NRN9 209 aaKnown RBP10.7□□□□□ -0.7
SPARC-209ENST00000539687 TUBGCP4Q9UGJ1 667 aa10.7□□□□□ -0.7
SPARC-209ENST00000539687 ASIC3Q9UHC3 531 aa10.7□□□□□ -0.7
SPARC-209ENST00000539687 FAM153AQ9UHL3 310 aa10.7□□□□□ -0.7
SPARC-209ENST00000539687 PLAAQ9Y263 795 aa10.7□□□□□ -0.7
SPARC-209ENST00000539687 GIT1Q9Y2X7 761 aa10.7□□□□□ -0.7
SPARC-209ENST00000539687 SNX24Q9Y343 169 aa10.7□□□□□ -0.7
SPARC-209ENST00000539687 NR2E1Q9Y466 385 aa10.7□□□□□ -0.7
SPARC-209ENST00000539687 CDY2AQ9Y6F7 541 aa10.7□□□□□ -0.7
SPARC-209ENST00000539687 LRRD1A4D1F6 860 aa10.69□□□□□ -0.7
SPARC-209ENST00000539687 ZNF487B1APH4 448 aa10.69□□□□□ -0.7
SPARC-209ENST00000539687 MAP3K13O43283 966 aa10.69□□□□□ -0.7
SPARC-209ENST00000539687 ATP5DP30049 168 aa10.69□□□□□ -0.7
SPARC-209ENST00000539687 SSTR3P32745 418 aaPredicted RBP10.69□□□□□ -0.7
SPARC-209ENST00000539687 RPL9P32969 192 aaKnown RBP10.69□□□□□ -0.7
SPARC-209ENST00000539687 RFC1P35251 1148 aaPredicted RBP10.69□□□□□ -0.7
SPARC-209ENST00000539687 GNL1P36915 607 aaPredicted RBP10.69□□□□□ -0.7
SPARC-209ENST00000539687 RPL21P46778 160 aaKnown RBP10.69□□□□□ -0.7
SPARC-209ENST00000539687 FLT3LGP49771 235 aa10.69□□□□□ -0.7
SPARC-209ENST00000539687 ZNF252P-AS1Q0IIN9 211 aa10.69□□□□□ -0.7
SPARC-209ENST00000539687 BST2Q10589 180 aaKnown RBP10.69□□□□□ -0.7
SPARC-209ENST00000539687 TFDP2Q14188 446 aa10.69□□□□□ -0.7
SPARC-209ENST00000539687 PDK2Q15119 407 aa10.69□□□□□ -0.7
SPARC-209ENST00000539687 BOLA3Q53S33 107 aa10.69□□□□□ -0.7
SPARC-209ENST00000539687 C2CD6Q53TS8 623 aa10.69□□□□□ -0.7
SPARC-209ENST00000539687 FAM47CQ5HY64 1035 aa10.69□□□□□ -0.7
SPARC-209ENST00000539687 CEP85LQ5SZL2 805 aa10.69□□□□□ -0.7
SPARC-209ENST00000539687 EMC10Q5UCC4 262 aa10.69□□□□□ -0.7
SPARC-209ENST00000539687 AADACL2Q6P093 401 aa10.69□□□□□ -0.7
SPARC-209ENST00000539687 GSTA5Q7RTV2 222 aa10.69□□□□□ -0.7
SPARC-209ENST00000539687 PHLDB2Q86SQ0 1253 aa10.69□□□□□ -0.7
SPARC-209ENST00000539687 TMEM110Q86TL2 294 aa10.69□□□□□ -0.7
SPARC-209ENST00000539687 FAM228AQ86W67 206 aa10.69□□□□□ -0.7
SPARC-209ENST00000539687 DDX42Q86XP3 938 aaKnown RBP eCLIP10.69□□□□□ -0.7
SPARC-209ENST00000539687 TMEM86AQ8N2M4 240 aa10.69□□□□□ -0.7
SPARC-209ENST00000539687 ANKRD52Q8NB46 1076 aa10.69□□□□□ -0.7
SPARC-209ENST00000539687 TEKT4Q8WW24 435 aa10.69□□□□□ -0.7
SPARC-209ENST00000539687 TRIB2Q92519 343 aa10.69□□□□□ -0.7
SPARC-209ENST00000539687 NKD2Q969F2 451 aaPredicted RBP10.69□□□□□ -0.7
SPARC-209ENST00000539687 LENG1Q96BZ8 264 aaPredicted RBP10.69□□□□□ -0.7
SPARC-209ENST00000539687 PGBD4Q96DM1 585 aa10.69□□□□□ -0.7
SPARC-209ENST00000539687 ATP6V1G3Q96LB4 118 aa10.69□□□□□ -0.7
SPARC-209ENST00000539687 ZMAT2Q96NC0 199 aaKnown RBP10.69□□□□□ -0.7
SPARC-209ENST00000539687 HINFPQ9BQA5 517 aa10.69□□□□□ -0.7
SPARC-209ENST00000539687 APOL6Q9BWW8 343 aa10.69□□□□□ -0.7
SPARC-209ENST00000539687 SLC4A5Q9BY07 1137 aa10.69□□□□□ -0.7
SPARC-209ENST00000539687 TXLNGYQ9BZA5 131 aa10.69□□□□□ -0.7
SPARC-209ENST00000539687 TRIM31Q9BZY9 425 aa10.69□□□□□ -0.7
SPARC-209ENST00000539687 TRIM7Q9C029 511 aa10.69□□□□□ -0.7
SPARC-209ENST00000539687 PHACTR1Q9C0D0 580 aa10.69□□□□□ -0.7
SPARC-209ENST00000539687 CDHR5Q9HBB8 845 aa10.69□□□□□ -0.7
SPARC-209ENST00000539687 XPNPEP3Q9NQH7 507 aa10.69□□□□□ -0.7
SPARC-209ENST00000539687 ST7Q9NRC1 585 aa10.69□□□□□ -0.7
SPARC-209ENST00000539687 MGAMO43451 1857 aa10.69□□□□□ -0.7
SPARC-209ENST00000539687 TNRC18O15417 2968 aaPredicted RBP10.68□□□□□ -0.7
SPARC-209ENST00000539687 hCG_1818297A0A087WSY0 165 aa10.68□□□□□ -0.7
SPARC-209ENST00000539687 FAM170AA1A519 330 aa10.68□□□□□ -0.7
SPARC-209ENST00000539687 F8VP50 259 aa10.68□□□□□ -0.7
SPARC-209ENST00000539687 LIASO43766 372 aa10.68□□□□□ -0.7
SPARC-209ENST00000539687 PRPSAP2O60256 369 aa10.68□□□□□ -0.7
SPARC-209ENST00000539687 ADAMTS4O75173 837 aa10.68□□□□□ -0.7
SPARC-209ENST00000539687 LRCH4O75427 683 aa10.68□□□□□ -0.7
SPARC-209ENST00000539687 ITGAVP06756 1048 aa10.68□□□□□ -0.7
SPARC-209ENST00000539687 IVLP07476 585 aa10.68□□□□□ -0.7
SPARC-209ENST00000539687 SDC4P31431 198 aa10.68□□□□□ -0.7
SPARC-209ENST00000539687 GJC1P36383 396 aa10.68□□□□□ -0.7
SPARC-209ENST00000539687 ADCY8P40145 1251 aa10.68□□□□□ -0.7
SPARC-209ENST00000539687 CDKN2BP42772 138 aa10.68□□□□□ -0.7
SPARC-209ENST00000539687 LHX1P48742 406 aa10.68□□□□□ -0.7
SPARC-209ENST00000539687 SKOR1P84550 965 aa10.68□□□□□ -0.7
SPARC-209ENST00000539687 SLC6A3Q01959 620 aa10.68□□□□□ -0.7
SPARC-209ENST00000539687 OGDHQ02218 1023 aa10.68□□□□□ -0.7
SPARC-209ENST00000539687 SP3Q02447 781 aa10.68□□□□□ -0.7
SPARC-209ENST00000539687 SLC25A11Q02978 314 aaKnown RBP10.68□□□□□ -0.7
SPARC-209ENST00000539687 ADCY2Q08462 1091 aa10.68□□□□□ -0.7
SPARC-209ENST00000539687 PTK7Q13308 1070 aa10.68□□□□□ -0.7
SPARC-209ENST00000539687 BYSLQ13895 437 aaKnown RBP10.68□□□□□ -0.7
SPARC-209ENST00000539687 TAZQ16635 292 aa10.68□□□□□ -0.7
SPARC-209ENST00000539687 NBPF20Q3BBV1 942 aa10.68□□□□□ -0.7
SPARC-209ENST00000539687 PKDCCQ504Y2 493 aa10.68□□□□□ -0.7
SPARC-209ENST00000539687 OR6B2Q6IFH4 312 aa10.68□□□□□ -0.7
SPARC-209ENST00000539687 LLGL2Q6P1M3 1020 aa10.68□□□□□ -0.7
SPARC-209ENST00000539687 ZDHHC24Q6UX98 284 aa10.68□□□□□ -0.7
SPARC-209ENST00000539687 PAXIP1Q6ZW49 1069 aaPredicted RBP10.68□□□□□ -0.7
SPARC-209ENST00000539687 BBS12Q6ZW61 710 aa10.68□□□□□ -0.7
SPARC-209ENST00000539687 LIMS2Q7Z4I7 341 aa10.68□□□□□ -0.7
SPARC-209ENST00000539687 RNF180Q86T96 592 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms