RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 PPP1R26Q5T8A7 1209 aaPredicted RBP13.5□□□□□ -0.25
TSPAN9-207ENST00000539631 VSTM1Q6UX27 236 aa13.5□□□□□ -0.25
TSPAN9-207ENST00000539631 ENOSF1Q7L5Y1 443 aa13.5□□□□□ -0.25
TSPAN9-207ENST00000539631 ELMOD1Q8N336 334 aa13.5□□□□□ -0.25
TSPAN9-207ENST00000539631 RBBP8NLQ8NC74 664 aaPredicted RBP13.5□□□□□ -0.25
TSPAN9-207ENST00000539631 JAKMIP2Q96AA8 810 aa13.5□□□□□ -0.25
TSPAN9-207ENST00000539631 FAM81BQ96LP2 452 aa13.5□□□□□ -0.25
TSPAN9-207ENST00000539631 PCMTD1Q96MG8 357 aaPredicted RBP13.5□□□□□ -0.25
TSPAN9-207ENST00000539631 NECTIN4Q96NY8 510 aa13.5□□□□□ -0.25
TSPAN9-207ENST00000539631 HNRNPABQ99729 332 aaKnown RBP13.5□□□□□ -0.25
TSPAN9-207ENST00000539631 CORO1BQ9BR76 489 aa13.5□□□□□ -0.25
TSPAN9-207ENST00000539631 DNAI2Q9GZS0 605 aa13.5□□□□□ -0.25
TSPAN9-207ENST00000539631 GANQ9H2C0 597 aa13.5□□□□□ -0.25
TSPAN9-207ENST00000539631 WDR6Q9NNW5 1121 aaKnown RBP13.5□□□□□ -0.25
TSPAN9-207ENST00000539631 PLCB1Q9NQ66 1216 aa13.5□□□□□ -0.25
TSPAN9-207ENST00000539631 FAM50BQ9Y247 325 aa13.5□□□□□ -0.25
TSPAN9-207ENST00000539631 ZNF638Q14966 1978 aaKnown RBP13.5□□□□□ -0.25
TSPAN9-207ENST00000539631 DENND4CQ5VZ89 1909 aa13.5□□□□□ -0.25
TSPAN9-207ENST00000539631 SPTBN5Q9NRC6 3674 aaKnown RBP13.5□□□□□ -0.25
TSPAN9-207ENST00000539631 BRWD1Q9NSI6 2320 aa13.5□□□□□ -0.25
TSPAN9-207ENST00000539631 CLUHO75153 1309 aa13.49□□□□□ -0.25
TSPAN9-207ENST00000539631 A0A1B0GTH6 734 aa13.49□□□□□ -0.25
TSPAN9-207ENST00000539631 F8VP50 259 aa13.49□□□□□ -0.25
TSPAN9-207ENST00000539631 EPHB6O15197 1021 aa13.49□□□□□ -0.25
TSPAN9-207ENST00000539631 BEST1O76090 585 aa13.49□□□□□ -0.25
TSPAN9-207ENST00000539631 NOL4O94818 638 aa13.49□□□□□ -0.25
TSPAN9-207ENST00000539631 RHOP08100 348 aa13.49□□□□□ -0.25
TSPAN9-207ENST00000539631 CD19P15391 556 aa13.49□□□□□ -0.25
TSPAN9-207ENST00000539631 PLA2G5P39877 138 aa13.49□□□□□ -0.25
TSPAN9-207ENST00000539631 ZNF132P52740 706 aa13.49□□□□□ -0.25
TSPAN9-207ENST00000539631 MTMR3Q13615 1198 aa13.49□□□□□ -0.25
TSPAN9-207ENST00000539631 VEPH1Q14D04 833 aa13.49□□□□□ -0.25
TSPAN9-207ENST00000539631 DNAJB7Q7Z6W7 309 aaPredicted RBP13.49□□□□□ -0.25
TSPAN9-207ENST00000539631 PSMG2Q969U7 264 aa13.49□□□□□ -0.25
TSPAN9-207ENST00000539631 FAM122AQ96E09 287 aa13.49□□□□□ -0.25
TSPAN9-207ENST00000539631 SMARCD1Q96GM5 515 aa13.49□□□□□ -0.25
TSPAN9-207ENST00000539631 ERGIC2Q96RQ1 377 aa13.49□□□□□ -0.25
TSPAN9-207ENST00000539631 SMOQ99835 787 aa13.49□□□□□ -0.25
TSPAN9-207ENST00000539631 NAA15Q9BXJ9 866 aaKnown RBP13.49□□□□□ -0.25
TSPAN9-207ENST00000539631 LRRC3Q9BY71 257 aa13.49□□□□□ -0.25
TSPAN9-207ENST00000539631 ZNF334Q9HCZ1 680 aaPredicted RBP13.49□□□□□ -0.25
TSPAN9-207ENST00000539631 KRT82Q9NSB4 513 aa13.49□□□□□ -0.25
TSPAN9-207ENST00000539631 FAM207AQ9NSI2 230 aaPredicted RBP13.49□□□□□ -0.25
TSPAN9-207ENST00000539631 CNTN6Q9UQ52 1028 aa13.49□□□□□ -0.25
TSPAN9-207ENST00000539631 ASB3Q9Y575 518 aa13.49□□□□□ -0.25
TSPAN9-207ENST00000539631 MYO16Q9Y6X6 1858 aa13.48□□□□□ -0.25
TSPAN9-207ENST00000539631 SLC38A8A6NNN8 435 aa13.48□□□□□ -0.25
TSPAN9-207ENST00000539631 TRIM66O15016 1216 aa13.48□□□□□ -0.25
TSPAN9-207ENST00000539631 AP1G2O75843 785 aa13.48□□□□□ -0.25
TSPAN9-207ENST00000539631 PAEPP09466 180 aa13.48□□□□□ -0.25
TSPAN9-207ENST00000539631 PNMA6AP0CW24 399 aaPredicted RBP13.48□□□□□ -0.25
TSPAN9-207ENST00000539631 VDRP11473 427 aa13.48□□□□□ -0.25
TSPAN9-207ENST00000539631 MYL4P12829 197 aa13.48□□□□□ -0.25
TSPAN9-207ENST00000539631 UCHL3P15374 230 aa13.48□□□□□ -0.25
TSPAN9-207ENST00000539631 FSHRP23945 695 aa13.48□□□□□ -0.25
TSPAN9-207ENST00000539631 ANXA13P27216 316 aa13.48□□□□□ -0.25
TSPAN9-207ENST00000539631 USP8P40818 1118 aa13.48□□□□□ -0.25
TSPAN9-207ENST00000539631 MAP3K7CLP57077 242 aa13.48□□□□□ -0.25
TSPAN9-207ENST00000539631 RAPGEF1Q13905 1077 aa13.48□□□□□ -0.25
TSPAN9-207ENST00000539631 DRAP1Q14919 205 aaPredicted RBP13.48□□□□□ -0.25
TSPAN9-207ENST00000539631 NR1I3Q14994 352 aa13.48□□□□□ -0.25
TSPAN9-207ENST00000539631 PABPC1LQ4VXU2 614 aaKnown RBP13.48□□□□□ -0.25
TSPAN9-207ENST00000539631 SGO2Q562F6 1265 aa13.48□□□□□ -0.25
TSPAN9-207ENST00000539631 ARHGAP17Q68EM7 881 aa13.48□□□□□ -0.25
TSPAN9-207ENST00000539631 ITIH5Q86UX2 942 aa13.48□□□□□ -0.25
TSPAN9-207ENST00000539631 TMC8Q8IU68 726 aa13.48□□□□□ -0.25
TSPAN9-207ENST00000539631 ZMIZ2Q8NF64 920 aa13.48□□□□□ -0.25
TSPAN9-207ENST00000539631 TFAP2BQ92481 460 aa13.48□□□□□ -0.25
TSPAN9-207ENST00000539631 SHC3Q92529 594 aa13.48□□□□□ -0.25
TSPAN9-207ENST00000539631 SPATA17Q96L03 361 aa13.48□□□□□ -0.25
TSPAN9-207ENST00000539631 C8orf48Q96LL4 319 aa13.48□□□□□ -0.25
TSPAN9-207ENST00000539631 KCNK16Q96T55 309 aa13.48□□□□□ -0.25
TSPAN9-207ENST00000539631 PHF7Q9BWX1 381 aaPredicted RBP13.48□□□□□ -0.25
TSPAN9-207ENST00000539631 GPR88Q9GZN0 384 aa13.48□□□□□ -0.25
TSPAN9-207ENST00000539631 MAGED2Q9UNF1 606 aaPredicted RBP13.48□□□□□ -0.25
TSPAN9-207ENST00000539631 C5orf42Q9H799 3197 aa13.48□□□□□ -0.25
TSPAN9-207ENST00000539631 ANAPC1Q9H1A4 1944 aa13.47□□□□□ -0.25
TSPAN9-207ENST00000539631 FOXN3O00409 490 aaPredicted RBP13.47□□□□□ -0.25
TSPAN9-207ENST00000539631 NRG2O14511 850 aaPredicted RBP13.47□□□□□ -0.25
TSPAN9-207ENST00000539631 FAM200BP0CF97 657 aa13.47□□□□□ -0.25
TSPAN9-207ENST00000539631 CSH1P0DML2 217 aa13.47□□□□□ -0.25
TSPAN9-207ENST00000539631 CSH2P0DML3 217 aa13.47□□□□□ -0.25
TSPAN9-207ENST00000539631 HMGA1P17096 107 aaKnown RBP13.47□□□□□ -0.25
TSPAN9-207ENST00000539631 GJA1P17302 382 aa13.47□□□□□ -0.25
TSPAN9-207ENST00000539631 SP100P23497 879 aaPredicted RBP13.47□□□□□ -0.25
TSPAN9-207ENST00000539631 BRD2P25440 801 aaKnown RBP13.47□□□□□ -0.25
TSPAN9-207ENST00000539631 SSTR3P32745 418 aaPredicted RBP13.47□□□□□ -0.25
TSPAN9-207ENST00000539631 CCR2P41597 374 aa13.47□□□□□ -0.25
TSPAN9-207ENST00000539631 EPHA5P54756 1037 aa13.47□□□□□ -0.25
TSPAN9-207ENST00000539631 UBASH3AP57075 661 aa13.47□□□□□ -0.25
TSPAN9-207ENST00000539631 POLR2FP61218 127 aaKnown RBP13.47□□□□□ -0.25
TSPAN9-207ENST00000539631 TAF12Q16514 161 aa13.47□□□□□ -0.25
TSPAN9-207ENST00000539631 SLC5A9Q2M3M2 681 aa13.47□□□□□ -0.25
TSPAN9-207ENST00000539631 GOLGA7BQ2TAP0 167 aa13.47□□□□□ -0.25
TSPAN9-207ENST00000539631 TJAP1Q5JTD0 557 aa13.47□□□□□ -0.25
TSPAN9-207ENST00000539631 PRSS36Q5K4E3 855 aa13.47□□□□□ -0.25
TSPAN9-207ENST00000539631 CLEC20AQ6ZU45 233 aa13.47□□□□□ -0.25
TSPAN9-207ENST00000539631 PDZD4Q76G19 769 aaPredicted RBP13.47□□□□□ -0.25
TSPAN9-207ENST00000539631 GET4Q7L5D6 327 aaPredicted RBP13.47□□□□□ -0.25
TSPAN9-207ENST00000539631 GAS2L3Q86XJ1 694 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms