RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 ZSCAN26Q16670 478 aa21.36■■□□□ 1.01
PACSIN3-211ENST00000539589 SLC4A11Q8NBS3 891 aa21.36■■□□□ 1.01
PACSIN3-211ENST00000539589 BEST2Q8NFU1 509 aa21.36■■□□□ 1.01
PACSIN3-211ENST00000539589 ART4Q93070 314 aa21.36■■□□□ 1.01
PACSIN3-211ENST00000539589 TMEM176AQ96HP8 235 aa21.36■■□□□ 1.01
PACSIN3-211ENST00000539589 RBM41Q96IZ5 413 aaKnown RBP21.36■■□□□ 1.01
PACSIN3-211ENST00000539589 ZFP42Q96MM3 310 aa21.36■■□□□ 1.01
PACSIN3-211ENST00000539589 TWNKQ96RR1 684 aa21.36■■□□□ 1.01
PACSIN3-211ENST00000539589 HERPUD2Q9BSE4 406 aa21.36■■□□□ 1.01
PACSIN3-211ENST00000539589 FAM124BQ9H5Z6 455 aaPredicted RBP21.36■■□□□ 1.01
PACSIN3-211ENST00000539589 HMGXB4Q9UGU5 601 aa21.36■■□□□ 1.01
PACSIN3-211ENST00000539589 UBQLN1Q9UMX0 589 aaKnown RBP21.36■■□□□ 1.01
PACSIN3-211ENST00000539589 KBTBD13C9JR72 458 aa21.35■■□□□ 1.01
PACSIN3-211ENST00000539589 GAS8O95995 478 aa21.35■■□□□ 1.01
PACSIN3-211ENST00000539589 CDK7P50613 346 aa21.35■■□□□ 1.01
PACSIN3-211ENST00000539589 AFF1P51825 1210 aaKnown RBP21.35■■□□□ 1.01
PACSIN3-211ENST00000539589 KRT17Q04695 432 aa21.35■■□□□ 1.01
PACSIN3-211ENST00000539589 CYP4A22Q5TCH4 519 aa21.35■■□□□ 1.01
PACSIN3-211ENST00000539589 C9orf57Q5W0N0 161 aa21.35■■□□□ 1.01
PACSIN3-211ENST00000539589 TTC39CQ8N584 583 aa21.35■■□□□ 1.01
PACSIN3-211ENST00000539589 NIPA2Q8N8Q9 360 aa21.35■■□□□ 1.01
PACSIN3-211ENST00000539589 ATL2Q8NHH9 583 aa21.35■■□□□ 1.01
PACSIN3-211ENST00000539589 ATG4AQ8WYN0 398 aa21.35■■□□□ 1.01
PACSIN3-211ENST00000539589 LPPQ93052 612 aa21.35■■□□□ 1.01
PACSIN3-211ENST00000539589 PABPC3Q9H361 631 aaKnown RBP21.35■■□□□ 1.01
PACSIN3-211ENST00000539589 GOLGA2P5Q9HBQ8 144 aa21.35■■□□□ 1.01
PACSIN3-211ENST00000539589 ZNF252P-AS1Q0IIN9 211 aa21.34■■□□□ 1.01
PACSIN3-211ENST00000539589 ORC1Q13415 861 aa21.34■■□□□ 1.01
PACSIN3-211ENST00000539589 CCNG2Q16589 344 aa21.34■■□□□ 1.01
PACSIN3-211ENST00000539589 PTPN20Q4JDL3 420 aa21.34■■□□□ 1.01
PACSIN3-211ENST00000539589 DNAJC21Q5F1R6 531 aaKnown RBP21.34■■□□□ 1.01
PACSIN3-211ENST00000539589 ZFYVE27Q5T4F4 411 aa21.34■■□□□ 1.01
PACSIN3-211ENST00000539589 EMC10Q5UCC4 262 aa21.34■■□□□ 1.01
PACSIN3-211ENST00000539589 GSTCDQ8NEC7 633 aa21.34■■□□□ 1.01
PACSIN3-211ENST00000539589 CENPHQ9H3R5 247 aa21.34■■□□□ 1.01
PACSIN3-211ENST00000539589 WHRNQ9P202 907 aa21.34■■□□□ 1.01
PACSIN3-211ENST00000539589 F8VP50 259 aa21.34■■□□□ 1.01
PACSIN3-211ENST00000539589 DNM1LO00429 736 aa21.34■■□□□ 1.01
PACSIN3-211ENST00000539589 CCL5P13501 91 aa21.34■■□□□ 1.01
PACSIN3-211ENST00000539589 IFFO1Q0D2I5 559 aa21.34■■□□□ 1.01
PACSIN3-211ENST00000539589 KDM7AQ6ZMT4 941 aa21.34■■□□□ 1.01
PACSIN3-211ENST00000539589 RNF25Q96BH1 459 aaPredicted RBP21.34■■□□□ 1.01
PACSIN3-211ENST00000539589 ELOVL4Q9GZR5 314 aa21.34■■□□□ 1.01
PACSIN3-211ENST00000539589 WDR35Q9P2L0 1181 aa21.34■■□□□ 1.01
PACSIN3-211ENST00000539589 SIGLEC16A6NMB1 481 aa21.33■■□□□ 1.01
PACSIN3-211ENST00000539589 PIRO00625 290 aa21.33■■□□□ 1.01
PACSIN3-211ENST00000539589 KRT3P12035 628 aa21.33■■□□□ 1.01
PACSIN3-211ENST00000539589 NR1D1P20393 614 aa21.33■■□□□ 1.01
PACSIN3-211ENST00000539589 OGDHQ02218 1023 aa21.33■■□□□ 1.01
PACSIN3-211ENST00000539589 SLMAPQ14BN4 828 aa21.33■■□□□ 1.01
PACSIN3-211ENST00000539589 ODF2Q5BJF6 829 aa21.33■■□□□ 1.01
PACSIN3-211ENST00000539589 AGMOQ6ZNB7 445 aa21.33■■□□□ 1.01
PACSIN3-211ENST00000539589 SYNCQ9H7C4 482 aa21.33■■□□□ 1.01
PACSIN3-211ENST00000539589 MIOSQ9NXC5 875 aa21.33■■□□□ 1.01
PACSIN3-211ENST00000539589 ASIC3Q9UHC3 531 aa21.33■■□□□ 1.01
PACSIN3-211ENST00000539589 BARX2Q9UMQ3 279 aaPredicted RBP21.33■■□□□ 1.01
PACSIN3-211ENST00000539589 R3HDM2Q9Y2K5 976 aaKnown RBP21.33■■□□□ 1.01
PACSIN3-211ENST00000539589 IVLP07476 585 aa21.33■■□□□ 1
PACSIN3-211ENST00000539589 VDRP11473 427 aa21.33■■□□□ 1
PACSIN3-211ENST00000539589 ITIH2P19823 946 aa21.33■■□□□ 1
PACSIN3-211ENST00000539589 PSMC1P62191 440 aaKnown RBP21.33■■□□□ 1
PACSIN3-211ENST00000539589 PTK6Q13882 451 aa21.33■■□□□ 1
PACSIN3-211ENST00000539589 MRPL10Q7Z7H8 261 aaKnown RBP21.33■■□□□ 1
PACSIN3-211ENST00000539589 CCDC114Q96M63 670 aa21.33■■□□□ 1
PACSIN3-211ENST00000539589 HEXIM2Q96MH2 286 aaKnown RBP21.33■■□□□ 1
PACSIN3-211ENST00000539589 PPP1R10Q96QC0 940 aaKnown RBP21.33■■□□□ 1
PACSIN3-211ENST00000539589 DDX56Q9NY93 547 aaKnown RBP21.33■■□□□ 1
PACSIN3-211ENST00000539589 CYTH4Q9UIA0 394 aa21.33■■□□□ 1
PACSIN3-211ENST00000539589 OGDHLQ9ULD0 1010 aa21.33■■□□□ 1
PACSIN3-211ENST00000539589 GOLGA8SH3BPF8 625 aa21.32■■□□□ 1
PACSIN3-211ENST00000539589 CAND2O75155 1236 aa21.32■■□□□ 1
PACSIN3-211ENST00000539589 KRT1P04264 644 aa21.32■■□□□ 1
PACSIN3-211ENST00000539589 NUDT17P0C025 328 aa21.32■■□□□ 1
PACSIN3-211ENST00000539589 ATF7P17544 494 aaPredicted RBP21.32■■□□□ 1
PACSIN3-211ENST00000539589 IRAK1P51617 712 aa21.32■■□□□ 1
PACSIN3-211ENST00000539589 GSCP56915 257 aaPredicted RBP21.32■■□□□ 1
PACSIN3-211ENST00000539589 COPS2P61201 443 aa21.32■■□□□ 1
PACSIN3-211ENST00000539589 INCA1Q0VD86 236 aa21.32■■□□□ 1
PACSIN3-211ENST00000539589 MYO1EQ12965 1108 aa21.32■■□□□ 1
PACSIN3-211ENST00000539589 CNGA2Q16280 664 aa21.32■■□□□ 1
PACSIN3-211ENST00000539589 AGBL2Q5U5Z8 902 aa21.32■■□□□ 1
PACSIN3-211ENST00000539589 DENND2CQ68D51 928 aa21.32■■□□□ 1
PACSIN3-211ENST00000539589 LRRC31Q6UY01 552 aa21.32■■□□□ 1
PACSIN3-211ENST00000539589 LRRC52Q8N7C0 313 aa21.32■■□□□ 1
PACSIN3-211ENST00000539589 SNF8Q96H20 258 aa21.32■■□□□ 1
PACSIN3-211ENST00000539589 SLITRK1Q96PX8 696 aa21.32■■□□□ 1
PACSIN3-211ENST00000539589 GAD1Q99259 594 aa21.32■■□□□ 1
PACSIN3-211ENST00000539589 RNF208Q9H0X6 261 aa21.32■■□□□ 1
PACSIN3-211ENST00000539589 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.32■■□□□ 1
PACSIN3-211ENST00000539589 NME7Q9Y5B8 376 aa21.32■■□□□ 1
PACSIN3-211ENST00000539589 SQORQ9Y6N5 450 aa21.32■■□□□ 1
PACSIN3-211ENST00000539589 TDRD15B5MCY1 1934 aaKnown RBP21.31■■□□□ 1
PACSIN3-211ENST00000539589 SPTLC1O15269 473 aa21.31■■□□□ 1
PACSIN3-211ENST00000539589 MICAL2O94851 1124 aa21.31■■□□□ 1
PACSIN3-211ENST00000539589 TJP3O95049 919 aa21.31■■□□□ 1
PACSIN3-211ENST00000539589 TCF4P15884 667 aa21.31■■□□□ 1
PACSIN3-211ENST00000539589 IGFBP6P24592 240 aaPredicted RBP21.31■■□□□ 1
PACSIN3-211ENST00000539589 MLH1P40692 756 aa21.31■■□□□ 1
PACSIN3-211ENST00000539589 HNRNPH2P55795 449 aaKnown RBP21.31■■□□□ 1
PACSIN3-211ENST00000539589 ZNF268Q14587 947 aaPredicted RBP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms