RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 C4orf50Q6ZRC1 276 aa13.4□□□□□ -0.26
VAMP1-206ENST00000538970 EPM2AIP1Q7L775 607 aaPredicted RBP13.4□□□□□ -0.26
VAMP1-206ENST00000538970 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.4□□□□□ -0.26
VAMP1-206ENST00000538970 WDR5BQ86VZ2 330 aa13.4□□□□□ -0.26
VAMP1-206ENST00000538970 WDR49Q8IV35 697 aa13.4□□□□□ -0.26
VAMP1-206ENST00000538970 SCN4BQ8IWT1 228 aa13.4□□□□□ -0.26
VAMP1-206ENST00000538970 MYLPFQ96A32 169 aa13.4□□□□□ -0.26
VAMP1-206ENST00000538970 DHX58Q96C10 678 aa13.4□□□□□ -0.26
VAMP1-206ENST00000538970 SLC22A12Q96S37 553 aa13.4□□□□□ -0.26
VAMP1-206ENST00000538970 TRPC7Q9HCX4 862 aa13.4□□□□□ -0.26
VAMP1-206ENST00000538970 CDH9Q9ULB4 789 aa13.4□□□□□ -0.26
VAMP1-206ENST00000538970 R3HCC1Q9Y3T6 440 aaKnown RBP13.4□□□□□ -0.26
VAMP1-206ENST00000538970 DENND4CQ5VZ89 1909 aa13.4□□□□□ -0.26
VAMP1-206ENST00000538970 TRAV19A0A0A6YYK7 116 aa13.39□□□□□ -0.27
VAMP1-206ENST00000538970 TGFB1I1O43294 461 aa13.39□□□□□ -0.27
VAMP1-206ENST00000538970 ATP2C2O75185 946 aa13.39□□□□□ -0.27
VAMP1-206ENST00000538970 YEATS4O95619 227 aa13.39□□□□□ -0.27
VAMP1-206ENST00000538970 CKMP06732 381 aa13.39□□□□□ -0.27
VAMP1-206ENST00000538970 USP17L7P0C7H9 530 aa13.39□□□□□ -0.27
VAMP1-206ENST00000538970 KCNA4P22459 653 aa13.39□□□□□ -0.27
VAMP1-206ENST00000538970 LMO2P25791 158 aa13.39□□□□□ -0.27
VAMP1-206ENST00000538970 ASIC1P78348 528 aa13.39□□□□□ -0.27
VAMP1-206ENST00000538970 FAM26FQ5R3K3 315 aa13.39□□□□□ -0.27
VAMP1-206ENST00000538970 SHC4Q6S5L8 630 aa13.39□□□□□ -0.27
VAMP1-206ENST00000538970 ZNF507Q8TCN5 953 aa13.39□□□□□ -0.27
VAMP1-206ENST00000538970 OSCP1Q8WVF1 389 aa13.39□□□□□ -0.27
VAMP1-206ENST00000538970 ZNF396Q96N95 335 aaPredicted RBP13.39□□□□□ -0.27
VAMP1-206ENST00000538970 BACH2Q9BYV9 841 aa13.39□□□□□ -0.27
VAMP1-206ENST00000538970 KIAA1586Q9HCI6 787 aa13.39□□□□□ -0.27
VAMP1-206ENST00000538970 CRTAC1Q9NQ79 661 aa13.39□□□□□ -0.27
VAMP1-206ENST00000538970 AGPAT3Q9NRZ7 376 aa13.39□□□□□ -0.27
VAMP1-206ENST00000538970 SEMA4GQ9NTN9 838 aa13.39□□□□□ -0.27
VAMP1-206ENST00000538970 TFIP11Q9UBB9 837 aaKnown RBP13.39□□□□□ -0.27
VAMP1-206ENST00000538970 UBE4BO95155 1302 aa13.39□□□□□ -0.27
VAMP1-206ENST00000538970 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.38□□□□□ -0.27
VAMP1-206ENST00000538970 C2orf78A6NCI8 922 aa13.38□□□□□ -0.27
VAMP1-206ENST00000538970 SLC30A4O14863 429 aa13.38□□□□□ -0.27
VAMP1-206ENST00000538970 CUTAO60888 179 aa13.38□□□□□ -0.27
VAMP1-206ENST00000538970 ATG13O75143 517 aa13.38□□□□□ -0.27
VAMP1-206ENST00000538970 RNF40O75150 1001 aa13.38□□□□□ -0.27
VAMP1-206ENST00000538970 EGFP01133 1207 aa13.38□□□□□ -0.27
VAMP1-206ENST00000538970 WARSP23381 471 aaKnown RBP13.38□□□□□ -0.27
VAMP1-206ENST00000538970 GJA4P35212 333 aa13.38□□□□□ -0.27
VAMP1-206ENST00000538970 AMPD3Q01432 767 aa13.38□□□□□ -0.27
VAMP1-206ENST00000538970 AMPD2Q01433 879 aa13.38□□□□□ -0.27
VAMP1-206ENST00000538970 EHHADHQ08426 723 aa13.38□□□□□ -0.27
VAMP1-206ENST00000538970 ACAP1Q15027 740 aa13.38□□□□□ -0.27
VAMP1-206ENST00000538970 MAPRE1Q15691 268 aaKnown RBP13.38□□□□□ -0.27
VAMP1-206ENST00000538970 CSRP2Q16527 193 aa13.38□□□□□ -0.27
VAMP1-206ENST00000538970 SNRNP35Q16560 246 aaKnown RBP13.38□□□□□ -0.27
VAMP1-206ENST00000538970 NAIF1Q69YI7 327 aaPredicted RBP13.38□□□□□ -0.27
VAMP1-206ENST00000538970 VSTM1Q6UX27 236 aa13.38□□□□□ -0.27
VAMP1-206ENST00000538970 PRR23CQ6ZRP0 262 aa13.38□□□□□ -0.27
VAMP1-206ENST00000538970 CEP68Q76N32 757 aa13.38□□□□□ -0.27
VAMP1-206ENST00000538970 TRAPPC11Q7Z392 1133 aa13.38□□□□□ -0.27
VAMP1-206ENST00000538970 CPA6Q8N4T0 437 aa13.38□□□□□ -0.27
VAMP1-206ENST00000538970 FAM160A2Q8N612 972 aaPredicted RBP13.38□□□□□ -0.27
VAMP1-206ENST00000538970 ARL14EPQ8N8R7 260 aaPredicted RBP13.38□□□□□ -0.27
VAMP1-206ENST00000538970 IQUBQ8NA54 791 aa13.38□□□□□ -0.27
VAMP1-206ENST00000538970 SPATA17Q96L03 361 aa13.38□□□□□ -0.27
VAMP1-206ENST00000538970 CEP295NLQ96MC4 621 aa13.38□□□□□ -0.27
VAMP1-206ENST00000538970 CYP2S1Q96SQ9 504 aa13.38□□□□□ -0.27
VAMP1-206ENST00000538970 P2RY13Q9BPV8 354 aa13.38□□□□□ -0.27
VAMP1-206ENST00000538970 C7orf25Q9BPX7 421 aa13.38□□□□□ -0.27
VAMP1-206ENST00000538970 ECT2Q9H8V3 914 aa13.38□□□□□ -0.27
VAMP1-206ENST00000538970 FBRSL1Q9HCM7 1045 aaKnown RBP13.38□□□□□ -0.27
VAMP1-206ENST00000538970 DUS2Q9NX74 493 aaKnown RBP13.38□□□□□ -0.27
VAMP1-206ENST00000538970 GCNT4Q9P109 453 aa13.38□□□□□ -0.27
VAMP1-206ENST00000538970 MAGEC2Q9UBF1 373 aaPredicted RBP13.38□□□□□ -0.27
VAMP1-206ENST00000538970 WNT6Q9Y6F9 365 aa13.38□□□□□ -0.27
VAMP1-206ENST00000538970 CCDC163A0A0D9SF12 145 aa13.37□□□□□ -0.27
VAMP1-206ENST00000538970 DLATP10515 647 aaKnown RBP13.37□□□□□ -0.27
VAMP1-206ENST00000538970 TCF3P15923 654 aa13.37□□□□□ -0.27
VAMP1-206ENST00000538970 DRD1P21728 446 aa13.37□□□□□ -0.27
VAMP1-206ENST00000538970 BDNFP23560 247 aa13.37□□□□□ -0.27
VAMP1-206ENST00000538970 IFNAR2P48551 515 aa13.37□□□□□ -0.27
VAMP1-206ENST00000538970 PXNP49023 591 aaPredicted RBP13.37□□□□□ -0.27
VAMP1-206ENST00000538970 GALK1P51570 392 aa13.37□□□□□ -0.27
VAMP1-206ENST00000538970 KCNB1Q14721 858 aa13.37□□□□□ -0.27
VAMP1-206ENST00000538970 PSMD6Q15008 389 aa13.37□□□□□ -0.27
VAMP1-206ENST00000538970 EML3Q32P44 896 aa13.37□□□□□ -0.27
VAMP1-206ENST00000538970 UNC13DQ70J99 1090 aa13.37□□□□□ -0.27
VAMP1-206ENST00000538970 FSIP1Q8NA03 581 aa13.37□□□□□ -0.27
VAMP1-206ENST00000538970 RDH13Q8NBN7 331 aa13.37□□□□□ -0.27
VAMP1-206ENST00000538970 NETO1Q8TDF5 533 aa13.37□□□□□ -0.27
VAMP1-206ENST00000538970 SH3RF2Q8TEC5 729 aa13.37□□□□□ -0.27
VAMP1-206ENST00000538970 SCFD1Q8WVM8 642 aa13.37□□□□□ -0.27
VAMP1-206ENST00000538970 GAB3Q8WWW8 586 aa13.37□□□□□ -0.27
VAMP1-206ENST00000538970 EZH1Q92800 747 aaPredicted RBP13.37□□□□□ -0.27
VAMP1-206ENST00000538970 ATP2A3Q93084 1043 aa13.37□□□□□ -0.27
VAMP1-206ENST00000538970 PCED1BQ96HM7 432 aa13.37□□□□□ -0.27
VAMP1-206ENST00000538970 MMS19Q96T76 1030 aa13.37□□□□□ -0.27
VAMP1-206ENST00000538970 CGRRF1Q99675 332 aa13.37□□□□□ -0.27
VAMP1-206ENST00000538970 MRPL45Q9BRJ2 306 aaKnown RBP13.37□□□□□ -0.27
VAMP1-206ENST00000538970 GZF1Q9H116 711 aaPredicted RBP13.37□□□□□ -0.27
VAMP1-206ENST00000538970 MAGEF1Q9HAY2 307 aa13.37□□□□□ -0.27
VAMP1-206ENST00000538970 ANGPTL2Q9UKU9 493 aa13.37□□□□□ -0.27
VAMP1-206ENST00000538970 ARHGAP26Q9UNA1 814 aa13.37□□□□□ -0.27
VAMP1-206ENST00000538970 SLC8A2Q9UPR5 921 aa13.37□□□□□ -0.27
VAMP1-206ENST00000538970 NME7Q9Y5B8 376 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms