RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	GIPC2	Q8TF65	315 aa		13.11	□□□□□ -0.31
CLTCL1-205	ENST00000538828	OVCA2	Q8WZ82	227 aa		13.11	□□□□□ -0.31
CLTCL1-205	ENST00000538828	ZSWIM3	Q96MP5	696 aa		13.11	□□□□□ -0.31
CLTCL1-205	ENST00000538828	KXD1	Q9BQD3	176 aa		13.11	□□□□□ -0.31
CLTCL1-205	ENST00000538828	NIF3L1	Q9GZT8	377 aa		13.11	□□□□□ -0.31
CLTCL1-205	ENST00000538828	KIAA1468	Q9P260	1216 aa		13.11	□□□□□ -0.31
CLTCL1-205	ENST00000538828	ARMCX3	Q9UH62	379 aa	Predicted RBP	13.11	□□□□□ -0.31
CLTCL1-205	ENST00000538828	MRPS17	Q9Y2R5	130 aa	Known RBP	13.11	□□□□□ -0.31
CLTCL1-205	ENST00000538828	NME7	Q9Y5B8	376 aa		13.11	□□□□□ -0.31
CLTCL1-205	ENST00000538828	OBSL1	O75147	1896 aa		13.1	□□□□□ -0.31
CLTCL1-205	ENST00000538828	KANSL1L	A0AUZ9	987 aa		13.1	□□□□□ -0.31
CLTCL1-205	ENST00000538828	HEPACAM2	A8MVW5	462 aa		13.1	□□□□□ -0.31
CLTCL1-205	ENST00000538828	PPP1R3G	B7ZBB8	358 aa		13.1	□□□□□ -0.31
CLTCL1-205	ENST00000538828	MAN2B1	O00754	1011 aa		13.1	□□□□□ -0.31
CLTCL1-205	ENST00000538828	NRG2	O14511	850 aa	Predicted RBP	13.1	□□□□□ -0.31
CLTCL1-205	ENST00000538828	P4HA2	O15460	535 aa		13.1	□□□□□ -0.31
CLTCL1-205	ENST00000538828	GNA14	O95837	355 aa		13.1	□□□□□ -0.31
CLTCL1-205	ENST00000538828	PDGFB	P01127	241 aa	Predicted RBP	13.1	□□□□□ -0.31
CLTCL1-205	ENST00000538828	BDNF	P23560	247 aa		13.1	□□□□□ -0.31
CLTCL1-205	ENST00000538828	ANXA13	P27216	316 aa		13.1	□□□□□ -0.31
CLTCL1-205	ENST00000538828	PLA2G5	P39877	138 aa		13.1	□□□□□ -0.31
CLTCL1-205	ENST00000538828	ASPA	P45381	313 aa		13.1	□□□□□ -0.31
CLTCL1-205	ENST00000538828	GCLM	P48507	274 aa		13.1	□□□□□ -0.31
CLTCL1-205	ENST00000538828	MXI1	P50539	228 aa		13.1	□□□□□ -0.31
CLTCL1-205	ENST00000538828	MARS	P56192	900 aa	Known RBP	13.1	□□□□□ -0.31
CLTCL1-205	ENST00000538828	PSMC1	P62191	440 aa	Known RBP	13.1	□□□□□ -0.31
CLTCL1-205	ENST00000538828	DDR2	Q16832	855 aa		13.1	□□□□□ -0.31
CLTCL1-205	ENST00000538828	ARHGAP29	Q52LW3	1261 aa		13.1	□□□□□ -0.31
CLTCL1-205	ENST00000538828	TTI2	Q6NXR4	508 aa		13.1	□□□□□ -0.31
CLTCL1-205	ENST00000538828	CELF5	Q8N6W0	485 aa	Known RBP	13.1	□□□□□ -0.31
CLTCL1-205	ENST00000538828	TAS1R2	Q8TE23	839 aa		13.1	□□□□□ -0.31
CLTCL1-205	ENST00000538828	IER2	Q9BTL4	223 aa		13.1	□□□□□ -0.31
CLTCL1-205	ENST00000538828	PLA2G2F	Q9BZM2	168 aa		13.1	□□□□□ -0.31
CLTCL1-205	ENST00000538828	SMYD3	Q9H7B4	428 aa		13.1	□□□□□ -0.31
CLTCL1-205	ENST00000538828	BRD9	Q9H8M2	597 aa		13.1	□□□□□ -0.31
CLTCL1-205	ENST00000538828	TBC1D17	Q9HA65	648 aa		13.1	□□□□□ -0.31
CLTCL1-205	ENST00000538828	PNPLA8	Q9NP80	782 aa		13.1	□□□□□ -0.31
CLTCL1-205	ENST00000538828	RAB20	Q9NX57	234 aa		13.1	□□□□□ -0.31
CLTCL1-205	ENST00000538828	IL37	Q9NZH6	218 aa		13.1	□□□□□ -0.31
CLTCL1-205	ENST00000538828	ZNF638	Q14966	1978 aa	Known RBP	13.1	□□□□□ -0.31
CLTCL1-205	ENST00000538828	NCAN	O14594	1321 aa		13.1	□□□□□ -0.31
CLTCL1-205	ENST00000538828	ANAPC1	Q9H1A4	1944 aa		13.09	□□□□□ -0.31
CLTCL1-205	ENST00000538828	FAM92A	A1XBS5	289 aa		13.09	□□□□□ -0.31
CLTCL1-205	ENST00000538828	ARNTL	O00327	626 aa		13.09	□□□□□ -0.31
CLTCL1-205	ENST00000538828	DPYSL4	O14531	572 aa		13.09	□□□□□ -0.31
CLTCL1-205	ENST00000538828	ZNF263	O14978	683 aa		13.09	□□□□□ -0.31
CLTCL1-205	ENST00000538828	NCAM2	O15394	837 aa		13.09	□□□□□ -0.31
CLTCL1-205	ENST00000538828	RTN3	O95197	1032 aa	Predicted RBP	13.09	□□□□□ -0.31
CLTCL1-205	ENST00000538828	FGFR1OP	O95684	399 aa	Known RBP	13.09	□□□□□ -0.31
CLTCL1-205	ENST00000538828	TRIM49	P0CI25	452 aa		13.09	□□□□□ -0.31
CLTCL1-205	ENST00000538828	TRIM49C	P0CI26	452 aa		13.09	□□□□□ -0.31
CLTCL1-205	ENST00000538828	GJA1	P17302	382 aa		13.09	□□□□□ -0.31
CLTCL1-205	ENST00000538828	BMP6	P22004	513 aa		13.09	□□□□□ -0.31
CLTCL1-205	ENST00000538828	GRIK1	P39086	918 aa		13.09	□□□□□ -0.31
CLTCL1-205	ENST00000538828	PMS1	P54277	932 aa	Known RBP	13.09	□□□□□ -0.31
CLTCL1-205	ENST00000538828	VCP	P55072	806 aa	Known RBP	13.09	□□□□□ -0.31
CLTCL1-205	ENST00000538828	CYP27A1	Q02318	531 aa		13.09	□□□□□ -0.31
CLTCL1-205	ENST00000538828	MDH1B	Q5I0G3	518 aa		13.09	□□□□□ -0.31
CLTCL1-205	ENST00000538828	MAMSTR	Q6ZN01	415 aa		13.09	□□□□□ -0.31
CLTCL1-205	ENST00000538828	SCN4B	Q8IWT1	228 aa		13.09	□□□□□ -0.31
CLTCL1-205	ENST00000538828	CCDC105	Q8IYK2	499 aa		13.09	□□□□□ -0.31
CLTCL1-205	ENST00000538828	TMEM105	Q8N8V8	129 aa		13.09	□□□□□ -0.31
CLTCL1-205	ENST00000538828	BPIFB1	Q8TDL5	484 aa		13.09	□□□□□ -0.31
CLTCL1-205	ENST00000538828	SLC35C1	Q96A29	364 aa		13.09	□□□□□ -0.31
CLTCL1-205	ENST00000538828	SMARCD1	Q96GM5	515 aa		13.09	□□□□□ -0.31
CLTCL1-205	ENST00000538828	NT5C1A	Q9BXI3	368 aa		13.09	□□□□□ -0.31
CLTCL1-205	ENST00000538828	SLC46A2	Q9BY10	475 aa		13.09	□□□□□ -0.31
CLTCL1-205	ENST00000538828	C8orf33	Q9H7E9	229 aa	Predicted RBP	13.09	□□□□□ -0.31
CLTCL1-205	ENST00000538828	CSNK1G1	Q9HCP0	422 aa		13.09	□□□□□ -0.31
CLTCL1-205	ENST00000538828	THG1L	Q9NWX6	298 aa	Known RBP	13.09	□□□□□ -0.31
CLTCL1-205	ENST00000538828	SIT1	Q9Y3P8	196 aa		13.09	□□□□□ -0.31
CLTCL1-205	ENST00000538828	WDFY4	Q6ZS81	3184 aa		13.08	□□□□□ -0.32
CLTCL1-205	ENST00000538828	KIF26A	Q9ULI4	1882 aa	Predicted RBP	13.08	□□□□□ -0.32
CLTCL1-205	ENST00000538828		F8VP50	259 aa		13.08	□□□□□ -0.32
CLTCL1-205	ENST00000538828	HCRT	O43612	131 aa		13.08	□□□□□ -0.32
CLTCL1-205	ENST00000538828	CILP	O75339	1184 aa		13.08	□□□□□ -0.32
CLTCL1-205	ENST00000538828	TADA3	O75528	432 aa		13.08	□□□□□ -0.32
CLTCL1-205	ENST00000538828	AVPR1A	P37288	418 aa		13.08	□□□□□ -0.32
CLTCL1-205	ENST00000538828	RPS9	P46781	194 aa	Known RBP	13.08	□□□□□ -0.32
CLTCL1-205	ENST00000538828	GPR15	P49685	360 aa		13.08	□□□□□ -0.32
CLTCL1-205	ENST00000538828	NDST1	P52848	882 aa		13.08	□□□□□ -0.32
CLTCL1-205	ENST00000538828	CDH8	P55286	799 aa		13.08	□□□□□ -0.32
CLTCL1-205	ENST00000538828	WDR44	Q5JSH3	913 aa		13.08	□□□□□ -0.32
CLTCL1-205	ENST00000538828	SNX30	Q5VWJ9	437 aa		13.08	□□□□□ -0.32
CLTCL1-205	ENST00000538828	ZNF852	Q6ZMS4	543 aa		13.08	□□□□□ -0.32
CLTCL1-205	ENST00000538828	YAF2	Q8IY57	180 aa		13.08	□□□□□ -0.32
CLTCL1-205	ENST00000538828	NUP93	Q8N1F7	819 aa		13.08	□□□□□ -0.32
CLTCL1-205	ENST00000538828	PDZD8	Q8NEN9	1154 aa		13.08	□□□□□ -0.32
CLTCL1-205	ENST00000538828	FLCN	Q8NFG4	579 aa		13.08	□□□□□ -0.32
CLTCL1-205	ENST00000538828	PJA1	Q8NG27	643 aa		13.08	□□□□□ -0.32
CLTCL1-205	ENST00000538828	FAM122A	Q96E09	287 aa		13.08	□□□□□ -0.32
CLTCL1-205	ENST00000538828	HNRNPAB	Q99729	332 aa	Known RBP	13.08	□□□□□ -0.32
CLTCL1-205	ENST00000538828	DUSP9	Q99956	384 aa	Known RBP	13.08	□□□□□ -0.32
CLTCL1-205	ENST00000538828	B3GNT5	Q9BYG0	378 aa		13.08	□□□□□ -0.32
CLTCL1-205	ENST00000538828	SDCBP2	Q9H190	292 aa		13.08	□□□□□ -0.32
CLTCL1-205	ENST00000538828	APOBEC3G	Q9HC16	384 aa	Known RBP	13.08	□□□□□ -0.32
CLTCL1-205	ENST00000538828	DMAP1	Q9NPF5	467 aa	Predicted RBP	13.08	□□□□□ -0.32
CLTCL1-205	ENST00000538828	TDP1	Q9NUW8	608 aa		13.08	□□□□□ -0.32
CLTCL1-205	ENST00000538828	DLGAP2	Q9P1A6	1054 aa		13.08	□□□□□ -0.32
CLTCL1-205	ENST00000538828	CA14	Q9ULX7	337 aa		13.08	□□□□□ -0.32

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