RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 ARP10275 920 aa19.44■□□□□ 0.7
SFSWAP-207ENST00000538548 RGS2P41220 211 aa19.44■□□□□ 0.7
SFSWAP-207ENST00000538548 ECE1P42892 770 aa19.44■□□□□ 0.7
SFSWAP-207ENST00000538548 PTK7Q13308 1070 aa19.44■□□□□ 0.7
SFSWAP-207ENST00000538548 ITGA9Q13797 1035 aa19.44■□□□□ 0.7
SFSWAP-207ENST00000538548 HSF5Q4G112 596 aaPredicted RBP19.44■□□□□ 0.7
SFSWAP-207ENST00000538548 ANKRD22Q5VYY1 191 aa19.44■□□□□ 0.7
SFSWAP-207ENST00000538548 POTEAQ6S8J7 498 aa19.44■□□□□ 0.7
SFSWAP-207ENST00000538548 PIP4K2CQ8TBX8 421 aa19.44■□□□□ 0.7
SFSWAP-207ENST00000538548 MIPOL1Q8TD10 442 aa19.44■□□□□ 0.7
SFSWAP-207ENST00000538548 CPT1BQ92523 772 aa19.44■□□□□ 0.7
SFSWAP-207ENST00000538548 SENP7Q9BQF6 1050 aa19.44■□□□□ 0.7
SFSWAP-207ENST00000538548 PI4K2AQ9BTU6 479 aa19.44■□□□□ 0.7
SFSWAP-207ENST00000538548 RPS6KL1Q9Y6S9 549 aa19.44■□□□□ 0.7
SFSWAP-207ENST00000538548 SLC16A4O15374 487 aa19.44■□□□□ 0.7
SFSWAP-207ENST00000538548 TMCC1O94876 653 aa19.44■□□□□ 0.7
SFSWAP-207ENST00000538548 ATP5BP06576 529 aaKnown RBP19.44■□□□□ 0.7
SFSWAP-207ENST00000538548 FAM200BP0CF97 657 aa19.44■□□□□ 0.7
SFSWAP-207ENST00000538548 PTPN7P35236 360 aa19.44■□□□□ 0.7
SFSWAP-207ENST00000538548 INHBCP55103 352 aa19.44■□□□□ 0.7
SFSWAP-207ENST00000538548 USP46P62068 366 aa19.44■□□□□ 0.7
SFSWAP-207ENST00000538548 AOC3Q16853 763 aa19.44■□□□□ 0.7
SFSWAP-207ENST00000538548 CDC42EP5Q6NZY7 148 aa19.44■□□□□ 0.7
SFSWAP-207ENST00000538548 TRIM72Q6ZMU5 477 aa19.44■□□□□ 0.7
SFSWAP-207ENST00000538548 PRPF39Q86UA1 669 aaKnown RBP19.44■□□□□ 0.7
SFSWAP-207ENST00000538548 NAT8LQ8N9F0 302 aa19.44■□□□□ 0.7
SFSWAP-207ENST00000538548 LZICQ8WZA0 190 aa19.44■□□□□ 0.7
SFSWAP-207ENST00000538548 KCNQ5Q9NR82 932 aa19.44■□□□□ 0.7
SFSWAP-207ENST00000538548 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.44■□□□□ 0.7
SFSWAP-207ENST00000538548 RGS17Q9UGC6 210 aaPredicted RBP19.44■□□□□ 0.7
SFSWAP-207ENST00000538548 CIDEBQ9UHD4 219 aa19.44■□□□□ 0.7
SFSWAP-207ENST00000538548 EXOC7Q9UPT5 735 aa19.44■□□□□ 0.7
SFSWAP-207ENST00000538548 PPME1Q9Y570 386 aa19.44■□□□□ 0.7
SFSWAP-207ENST00000538548 IKBKGQ9Y6K9 419 aa19.44■□□□□ 0.7
SFSWAP-207ENST00000538548 SMCHD1A6NHR9 2005 aa19.43■□□□□ 0.7
SFSWAP-207ENST00000538548 DCAF8L1A6NGE4 600 aa19.43■□□□□ 0.7
SFSWAP-207ENST00000538548 ITGA2BP08514 1039 aa19.43■□□□□ 0.7
SFSWAP-207ENST00000538548 UBXN2AP68543 259 aa19.43■□□□□ 0.7
SFSWAP-207ENST00000538548 MDH1BQ5I0G3 518 aa19.43■□□□□ 0.7
SFSWAP-207ENST00000538548 LRRC38Q5VT99 294 aa19.43■□□□□ 0.7
SFSWAP-207ENST00000538548 ZNF772Q68DY9 489 aaPredicted RBP19.43■□□□□ 0.7
SFSWAP-207ENST00000538548 SATL1Q86VE3 508 aa19.43■□□□□ 0.7
SFSWAP-207ENST00000538548 TRIM42Q8IWZ5 723 aa19.43■□□□□ 0.7
SFSWAP-207ENST00000538548 SLC25A41Q8N5S1 370 aa19.43■□□□□ 0.7
SFSWAP-207ENST00000538548 FEZF2Q8TBJ5 459 aa19.43■□□□□ 0.7
SFSWAP-207ENST00000538548 HAUS1Q96CS2 278 aa19.43■□□□□ 0.7
SFSWAP-207ENST00000538548 MFSD14AQ96MC6 490 aa19.43■□□□□ 0.7
SFSWAP-207ENST00000538548 PTTG2Q9NZH5 202 aa19.43■□□□□ 0.7
SFSWAP-207ENST00000538548 hCG_1818297A0A087WSY0 165 aa19.43■□□□□ 0.7
SFSWAP-207ENST00000538548 TCF4P15884 667 aa19.43■□□□□ 0.7
SFSWAP-207ENST00000538548 RARRES1P49788 294 aa19.43■□□□□ 0.7
SFSWAP-207ENST00000538548 RPL26P61254 145 aaKnown RBP19.43■□□□□ 0.7
SFSWAP-207ENST00000538548 NOMO3P69849 1222 aa19.43■□□□□ 0.7
SFSWAP-207ENST00000538548 CDK18Q07002 472 aa19.43■□□□□ 0.7
SFSWAP-207ENST00000538548 SFT2D3Q587I9 215 aa19.43■□□□□ 0.7
SFSWAP-207ENST00000538548 SLC27A3Q5K4L6 730 aa19.43■□□□□ 0.7
SFSWAP-207ENST00000538548 MAP3K21Q5TCX8 1036 aa19.43■□□□□ 0.7
SFSWAP-207ENST00000538548 PHF13Q86YI8 300 aaPredicted RBP19.43■□□□□ 0.7
SFSWAP-207ENST00000538548 SLC35B2Q8TB61 432 aa19.43■□□□□ 0.7
SFSWAP-207ENST00000538548 CCDC106Q9BWC9 280 aa19.43■□□□□ 0.7
SFSWAP-207ENST00000538548 POLLQ9UGP5 575 aa19.43■□□□□ 0.7
SFSWAP-207ENST00000538548 ZNF862O60290 1169 aa19.42■□□□□ 0.7
SFSWAP-207ENST00000538548 VCLP18206 1134 aa19.42■□□□□ 0.7
SFSWAP-207ENST00000538548 NCKAP1LP55160 1127 aa19.42■□□□□ 0.7
SFSWAP-207ENST00000538548 NFIAQ12857 509 aa19.42■□□□□ 0.7
SFSWAP-207ENST00000538548 TFDP3Q5H9I0 405 aa19.42■□□□□ 0.7
SFSWAP-207ENST00000538548 PDIK1LQ8N165 341 aa19.42■□□□□ 0.7
SFSWAP-207ENST00000538548 DGCR14Q96DF8 476 aaKnown RBP19.42■□□□□ 0.7
SFSWAP-207ENST00000538548 MPP4Q96JB8 637 aa19.42■□□□□ 0.7
SFSWAP-207ENST00000538548 RIT2Q99578 217 aa19.42■□□□□ 0.7
SFSWAP-207ENST00000538548 KLHL4Q9C0H6 718 aa19.42■□□□□ 0.7
SFSWAP-207ENST00000538548 IQCGQ9H095 443 aaKnown RBP19.42■□□□□ 0.7
SFSWAP-207ENST00000538548 GINM1Q9NU53 330 aa19.42■□□□□ 0.7
SFSWAP-207ENST00000538548 PARVAQ9NVD7 372 aa19.42■□□□□ 0.7
SFSWAP-207ENST00000538548 SOX13Q9UN79 622 aa19.42■□□□□ 0.7
SFSWAP-207ENST00000538548 POLR2MP0CAP2 368 aa19.42■□□□□ 0.7
SFSWAP-207ENST00000538548 SCNN1BP51168 640 aa19.42■□□□□ 0.7
SFSWAP-207ENST00000538548 PEX3P56589 373 aa19.42■□□□□ 0.7
SFSWAP-207ENST00000538548 HIC1Q14526 733 aa19.42■□□□□ 0.7
SFSWAP-207ENST00000538548 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.42■□□□□ 0.7
SFSWAP-207ENST00000538548 EFHC1Q5JVL4 640 aa19.42■□□□□ 0.7
SFSWAP-207ENST00000538548 ARID3BQ8IVW6 561 aaPredicted RBP19.42■□□□□ 0.7
SFSWAP-207ENST00000538548 GSTCDQ8NEC7 633 aa19.42■□□□□ 0.7
SFSWAP-207ENST00000538548 SLC44A1Q8WWI5 657 aa19.42■□□□□ 0.7
SFSWAP-207ENST00000538548 EHMT1Q9H9B1 1298 aa19.42■□□□□ 0.7
SFSWAP-207ENST00000538548 IVNS1ABPQ9Y6Y0 642 aa19.42■□□□□ 0.7
SFSWAP-207ENST00000538548 A0A088AWK7 358 aa19.41■□□□□ 0.7
SFSWAP-207ENST00000538548 AP1G1O43747 822 aa19.41■□□□□ 0.7
SFSWAP-207ENST00000538548 P4HBP07237 508 aaKnown RBP19.41■□□□□ 0.7
SFSWAP-207ENST00000538548 C1QBPQ07021 282 aaKnown RBP19.41■□□□□ 0.7
SFSWAP-207ENST00000538548 MSLNQ13421 630 aaPredicted RBP19.41■□□□□ 0.7
SFSWAP-207ENST00000538548 TTLL12Q14166 644 aaPredicted RBP19.41■□□□□ 0.7
SFSWAP-207ENST00000538548 BBS9Q3SYG4 887 aa19.41■□□□□ 0.7
SFSWAP-207ENST00000538548 ATG16L1Q676U5 607 aa19.41■□□□□ 0.7
SFSWAP-207ENST00000538548 PASD1Q8IV76 773 aa19.41■□□□□ 0.7
SFSWAP-207ENST00000538548 NMD3Q96D46 503 aaKnown RBP19.41■□□□□ 0.7
SFSWAP-207ENST00000538548 FBXL18Q96ME1 805 aa19.41■□□□□ 0.7
SFSWAP-207ENST00000538548 PLEKHG4BQ96PX9 1271 aa19.41■□□□□ 0.7
SFSWAP-207ENST00000538548 SRPK1Q96SB4 655 aaKnown RBP19.41■□□□□ 0.7
SFSWAP-207ENST00000538548 PDGFDQ9GZP0 370 aaPredicted RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms