RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 TOMM70O94826 608 aa14.88□□□□□ -0.03
ACTN1-205ENST00000538545 HMGCRP04035 888 aa14.88□□□□□ -0.03
ACTN1-205ENST00000538545 ZSCAN5DPP0CG00 497 aa14.88□□□□□ -0.03
ACTN1-205ENST00000538545 LCP1P13796 627 aa14.88□□□□□ -0.03
ACTN1-205ENST00000538545 HSD17B3P37058 310 aa14.88□□□□□ -0.03
ACTN1-205ENST00000538545 NRLP54845 237 aa14.88□□□□□ -0.03
ACTN1-205ENST00000538545 DHX9Q08211 1270 aaKnown RBP14.88□□□□□ -0.03
ACTN1-205ENST00000538545 KLF1Q13351 362 aaPredicted RBP14.88□□□□□ -0.03
ACTN1-205ENST00000538545 ITGA7Q13683 1181 aa14.88□□□□□ -0.03
ACTN1-205ENST00000538545 PPP1R7Q15435 360 aa14.88□□□□□ -0.03
ACTN1-205ENST00000538545 TERF2Q15554 542 aa14.88□□□□□ -0.03
ACTN1-205ENST00000538545 KIAA0319Q5VV43 1072 aa14.88□□□□□ -0.03
ACTN1-205ENST00000538545 KLHDC9Q8NEP7 349 aa14.88□□□□□ -0.03
ACTN1-205ENST00000538545 PEBP4Q96S96 227 aa14.88□□□□□ -0.03
ACTN1-205ENST00000538545 ADAM33Q9BZ11 813 aa14.88□□□□□ -0.03
ACTN1-205ENST00000538545 CENPHQ9H3R5 247 aa14.88□□□□□ -0.03
ACTN1-205ENST00000538545 SRRDQ9UH36 339 aa14.88□□□□□ -0.03
ACTN1-205ENST00000538545 PSTPIP1O43586 416 aa14.87□□□□□ -0.03
ACTN1-205ENST00000538545 MAP3K6O95382 1288 aa14.87□□□□□ -0.03
ACTN1-205ENST00000538545 ALDH1A1P00352 501 aa14.87□□□□□ -0.03
ACTN1-205ENST00000538545 MMRN1Q13201 1228 aa14.87□□□□□ -0.03
ACTN1-205ENST00000538545 RAET1EQ8TD07 263 aa14.87□□□□□ -0.03
ACTN1-205ENST00000538545 DCLK3Q9C098 648 aa14.87□□□□□ -0.03
ACTN1-205ENST00000538545 PCYOX1Q9UHG3 505 aa14.87□□□□□ -0.03
ACTN1-205ENST00000538545 ADAM21Q9UKJ8 722 aa14.87□□□□□ -0.03
ACTN1-205ENST00000538545 PLAAQ9Y263 795 aa14.87□□□□□ -0.03
ACTN1-205ENST00000538545 TTC3P53804 2025 aa14.87□□□□□ -0.03
ACTN1-205ENST00000538545 ARL5CA6NH57 179 aa14.87□□□□□ -0.03
ACTN1-205ENST00000538545 TAF6P49848 677 aa14.87□□□□□ -0.03
ACTN1-205ENST00000538545 MGAT3Q09327 533 aa14.87□□□□□ -0.03
ACTN1-205ENST00000538545 APBB1IPQ7Z5R6 666 aaPredicted RBP14.87□□□□□ -0.03
ACTN1-205ENST00000538545 CCDC25Q86WR0 208 aa14.87□□□□□ -0.03
ACTN1-205ENST00000538545 KATNAL2Q8IYT4 538 aa14.87□□□□□ -0.03
ACTN1-205ENST00000538545 LRRC52Q8N7C0 313 aa14.87□□□□□ -0.03
ACTN1-205ENST00000538545 RXFP2Q8WXD0 754 aa14.87□□□□□ -0.03
ACTN1-205ENST00000538545 PPP1R10Q96QC0 940 aaKnown RBP14.87□□□□□ -0.03
ACTN1-205ENST00000538545 FAM204AQ9H8W3 233 aa14.87□□□□□ -0.03
ACTN1-205ENST00000538545 ZDHHC18Q9NUE0 388 aa14.87□□□□□ -0.03
ACTN1-205ENST00000538545 DNPEPQ9ULA0 475 aa14.87□□□□□ -0.03
ACTN1-205ENST00000538545 PAPSS1O43252 624 aaPredicted RBP14.86□□□□□ -0.03
ACTN1-205ENST00000538545 KCNE1P15382 129 aa14.86□□□□□ -0.03
ACTN1-205ENST00000538545 MIPP30301 263 aa14.86□□□□□ -0.03
ACTN1-205ENST00000538545 SLC25A11Q02978 314 aaKnown RBP14.86□□□□□ -0.03
ACTN1-205ENST00000538545 CUL1Q13616 776 aa14.86□□□□□ -0.03
ACTN1-205ENST00000538545 CYP1B1Q16678 543 aa14.86□□□□□ -0.03
ACTN1-205ENST00000538545 TTMPQ5BVD1 217 aa14.86□□□□□ -0.03
ACTN1-205ENST00000538545 CFAP58Q5T655 872 aa14.86□□□□□ -0.03
ACTN1-205ENST00000538545 ADGRF2Q8IZF7 708 aa14.86□□□□□ -0.03
ACTN1-205ENST00000538545 APPL2Q8NEU8 664 aa14.86□□□□□ -0.03
ACTN1-205ENST00000538545 TSPYL2Q9H2G4 693 aaPredicted RBP14.86□□□□□ -0.03
ACTN1-205ENST00000538545 VIPAS39Q9H9C1 493 aa14.86□□□□□ -0.03
ACTN1-205ENST00000538545 ASIC3Q9UHC3 531 aa14.86□□□□□ -0.03
ACTN1-205ENST00000538545 STRIP2Q9ULQ0 834 aa14.86□□□□□ -0.03
ACTN1-205ENST00000538545 DERAQ9Y315 318 aa14.86□□□□□ -0.03
ACTN1-205ENST00000538545 CYB561D2O14569 222 aa14.86□□□□□ -0.03
ACTN1-205ENST00000538545 STAU1O95793 577 aaKnown RBP14.86□□□□□ -0.03
ACTN1-205ENST00000538545 PDGFRAP16234 1089 aa14.86□□□□□ -0.03
ACTN1-205ENST00000538545 ACLYP53396 1101 aa14.86□□□□□ -0.03
ACTN1-205ENST00000538545 LPIN1Q14693 890 aa14.86□□□□□ -0.03
ACTN1-205ENST00000538545 PKDCCQ504Y2 493 aa14.86□□□□□ -0.03
ACTN1-205ENST00000538545 ODF2Q5BJF6 829 aa14.86□□□□□ -0.03
ACTN1-205ENST00000538545 XKR4Q5GH76 650 aa14.86□□□□□ -0.03
ACTN1-205ENST00000538545 TTC19Q6DKK2 380 aaPredicted RBP14.86□□□□□ -0.03
ACTN1-205ENST00000538545 SCYL2Q6P3W7 929 aa14.86□□□□□ -0.03
ACTN1-205ENST00000538545 IQCKQ8N0W5 287 aa14.86□□□□□ -0.03
ACTN1-205ENST00000538545 SEC14L1Q92503 715 aa14.86□□□□□ -0.03
ACTN1-205ENST00000538545 MCRS1Q96EZ8 462 aa14.86□□□□□ -0.03
ACTN1-205ENST00000538545 FMO2Q99518 471 aa14.86□□□□□ -0.03
ACTN1-205ENST00000538545 RHOBTB2Q9BYZ6 727 aa14.86□□□□□ -0.03
ACTN1-205ENST00000538545 RAB17Q9H0T7 212 aa14.86□□□□□ -0.03
ACTN1-205ENST00000538545 TET1Q8NFU7 2136 aa14.86□□□□□ -0.03
ACTN1-205ENST00000538545 TP73O15350 636 aa14.85□□□□□ -0.03
ACTN1-205ENST00000538545 HSF2BPO75031 334 aa14.85□□□□□ -0.03
ACTN1-205ENST00000538545 ECEL1O95672 775 aa14.85□□□□□ -0.03
ACTN1-205ENST00000538545 AARSP49588 968 aaKnown RBP eCLIP14.85□□□□□ -0.03
ACTN1-205ENST00000538545 GPS2Q13227 327 aa14.85□□□□□ -0.03
ACTN1-205ENST00000538545 MTM1Q13496 603 aa14.85□□□□□ -0.03
ACTN1-205ENST00000538545 DHX34Q14147 1143 aaKnown RBP14.85□□□□□ -0.03
ACTN1-205ENST00000538545 PIGHQ14442 188 aaPredicted RBP14.85□□□□□ -0.03
ACTN1-205ENST00000538545 SPOCD1Q6ZMY3 1216 aa14.85□□□□□ -0.03
ACTN1-205ENST00000538545 TMC3Q7Z5M5 1100 aa14.85□□□□□ -0.03
ACTN1-205ENST00000538545 RSPH3Q86UC2 560 aa14.85□□□□□ -0.03
ACTN1-205ENST00000538545 CCDC33Q8N5R6 958 aa14.85□□□□□ -0.03
ACTN1-205ENST00000538545 EXD1Q8NHP7 514 aa14.85□□□□□ -0.03
ACTN1-205ENST00000538545 SLC35F5Q8WV83 523 aa14.85□□□□□ -0.03
ACTN1-205ENST00000538545 RUBCNQ92622 972 aa14.85□□□□□ -0.03
ACTN1-205ENST00000538545 KHSRPQ92945 711 aaKnown RBP eCLIP14.85□□□□□ -0.03
ACTN1-205ENST00000538545 HHIPL1Q96JK4 782 aa14.85□□□□□ -0.03
ACTN1-205ENST00000538545 ADAM2Q99965 735 aa14.85□□□□□ -0.03
ACTN1-205ENST00000538545 SNX25Q9H3E2 840 aa14.85□□□□□ -0.03
ACTN1-205ENST00000538545 LRRC19Q9H756 370 aa14.85□□□□□ -0.03
ACTN1-205ENST00000538545 NGRNQ9NPE2 291 aaKnown RBP14.85□□□□□ -0.03
ACTN1-205ENST00000538545 CD4P01730 458 aa14.85□□□□□ -0.03
ACTN1-205ENST00000538545 IPO4Q8TEX9 1081 aaKnown RBP14.85□□□□□ -0.03
ACTN1-205ENST00000538545 SH3TC2Q8TF17 1288 aa14.85□□□□□ -0.03
ACTN1-205ENST00000538545 PLVAPQ9BX97 442 aa14.85□□□□□ -0.03
ACTN1-205ENST00000538545 DDX20Q9UHI6 824 aaKnown RBP14.85□□□□□ -0.03
ACTN1-205ENST00000538545 THSD7BQ9C0I4 1608 aa14.84□□□□□ -0.03
ACTN1-205ENST00000538545 HUS1O60921 280 aa14.84□□□□□ -0.03
ACTN1-205ENST00000538545 ITGB1P05556 798 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms