RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 SEC16BQ96JE7 1060 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 NLRP4Q96MN2 994 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 INO80BQ9C086 356 aaPredicted RBP9.74□□□□□ -0.85
DDB1-211ENST00000538280 RNPEPQ9H4A4 650 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 PDZD7Q9H5P4 517 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 C11orf49Q9H6J7 331 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 VTA1Q9NP79 307 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 PDGFCQ9NRA1 345 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 MTMR10Q9NXD2 777 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 CEP83Q9Y592 693 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 ACTL7BQ9Y614 415 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 IVNS1ABPQ9Y6Y0 642 aa9.74□□□□□ -0.85
DDB1-211ENST00000538280 TLDC2A0PJX2 215 aa9.73□□□□□ -0.85
DDB1-211ENST00000538280 LACTBL1A8MY62 500 aa9.73□□□□□ -0.85
DDB1-211ENST00000538280 PI4K2BG5E9Z4 385 aa9.73□□□□□ -0.85
DDB1-211ENST00000538280 CILPO75339 1184 aa9.73□□□□□ -0.85
DDB1-211ENST00000538280 KIAA0754O94854 1291 aa9.73□□□□□ -0.85
DDB1-211ENST00000538280 GH1P01241 217 aa9.73□□□□□ -0.85
DDB1-211ENST00000538280 ITGAVP06756 1048 aa9.73□□□□□ -0.85
DDB1-211ENST00000538280 STAG3L1P0CL83 205 aa9.73□□□□□ -0.85
DDB1-211ENST00000538280 KRT10P13645 584 aa9.73□□□□□ -0.85
DDB1-211ENST00000538280 PRKAR2AP13861 404 aaKnown RBP9.73□□□□□ -0.85
DDB1-211ENST00000538280 INSRRP14616 1297 aa9.73□□□□□ -0.85
DDB1-211ENST00000538280 CYP2B6P20813 491 aa9.73□□□□□ -0.85
DDB1-211ENST00000538280 CCND3P30281 292 aaPredicted RBP9.73□□□□□ -0.85
DDB1-211ENST00000538280 GJC1P36383 396 aa9.73□□□□□ -0.85
DDB1-211ENST00000538280 PTPN11Q06124 597 aaPredicted RBP9.73□□□□□ -0.85
DDB1-211ENST00000538280 INCA1Q0VD86 236 aa9.73□□□□□ -0.85
DDB1-211ENST00000538280 CBLBQ13191 982 aa9.73□□□□□ -0.85
DDB1-211ENST00000538280 ITIH4Q14624 930 aa9.73□□□□□ -0.85
DDB1-211ENST00000538280 STAT4Q14765 748 aa9.73□□□□□ -0.85
DDB1-211ENST00000538280 ACAP1Q15027 740 aa9.73□□□□□ -0.85
DDB1-211ENST00000538280 TRIP13Q15645 432 aaPredicted RBP9.73□□□□□ -0.85
DDB1-211ENST00000538280 LONRF1Q17RB8 773 aa9.73□□□□□ -0.85
DDB1-211ENST00000538280 LRRC26Q2I0M4 334 aa9.73□□□□□ -0.85
DDB1-211ENST00000538280 MAP3K21Q5TCX8 1036 aa9.73□□□□□ -0.85
DDB1-211ENST00000538280 DCUN1D2Q6PH85 259 aa9.73□□□□□ -0.85
DDB1-211ENST00000538280 SCARA5Q6ZMJ2 495 aa9.73□□□□□ -0.85
DDB1-211ENST00000538280 PIGWQ7Z7B1 504 aa9.73□□□□□ -0.85
DDB1-211ENST00000538280 CCDC25Q86WR0 208 aa9.73□□□□□ -0.85
DDB1-211ENST00000538280 XYLT1Q86Y38 959 aa9.73□□□□□ -0.85
DDB1-211ENST00000538280 NT5DC4Q86YG4 428 aa9.73□□□□□ -0.85
DDB1-211ENST00000538280 TDRPQ86YL5 185 aa9.73□□□□□ -0.85
DDB1-211ENST00000538280 TDHQ8IZJ6 230 aa9.73□□□□□ -0.85
DDB1-211ENST00000538280 JOSD2Q8TAC2 188 aa9.73□□□□□ -0.85
DDB1-211ENST00000538280 UHMK1Q8TAS1 419 aaKnown RBP9.73□□□□□ -0.85
DDB1-211ENST00000538280 TWNKQ96RR1 684 aa9.73□□□□□ -0.85
DDB1-211ENST00000538280 SELENOSQ9BQE4 189 aa9.73□□□□□ -0.85
DDB1-211ENST00000538280 COL25A1Q9BXS0 654 aaPredicted RBP9.73□□□□□ -0.85
DDB1-211ENST00000538280 ELOVL4Q9GZR5 314 aa9.73□□□□□ -0.85
DDB1-211ENST00000538280 PCDH9Q9HC56 1237 aa9.73□□□□□ -0.85
DDB1-211ENST00000538280 DNPEPQ9ULA0 475 aa9.73□□□□□ -0.85
DDB1-211ENST00000538280 OGDHLQ9ULD0 1010 aa9.73□□□□□ -0.85
DDB1-211ENST00000538280 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.73□□□□□ -0.85
DDB1-211ENST00000538280 PDCD11Q14690 1871 aaKnown RBP9.72□□□□□ -0.85
DDB1-211ENST00000538280 A0A087WZ62 844 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 LRCH4O75427 683 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 MICAL2O94851 1124 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 ENDOD1O94919 500 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 ACSL3O95573 720 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 OAS1P00973 400 aaKnown RBP9.72□□□□□ -0.85
DDB1-211ENST00000538280 KRT7P08729 469 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 GHRP10912 638 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 VDRP11473 427 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 COL6A1P12109 1028 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 RFC1P35251 1148 aaPredicted RBP9.72□□□□□ -0.85
DDB1-211ENST00000538280 SSR1P43307 286 aaKnown RBP9.72□□□□□ -0.85
DDB1-211ENST00000538280 SLCO1A2P46721 670 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 RAP1GAPP47736 663 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 ACTN3Q08043 901 aaPredicted RBP9.72□□□□□ -0.85
DDB1-211ENST00000538280 MORF4L2Q15014 288 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 RASA2Q15283 850 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 KYNUQ16719 465 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 P3H1Q32P28 736 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 SLC10A6Q3KNW5 377 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 WDR72Q3MJ13 1102 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 LRIT3Q3SXY7 679 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 ZNF394Q53GI3 561 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 RNASEH2BQ5TBB1 312 aaKnown RBP9.72□□□□□ -0.85
DDB1-211ENST00000538280 CYP4A22Q5TCH4 519 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 JADE1Q6IE81 842 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 BBS12Q6ZW61 710 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 CACNA2D3Q8IZS8 1091 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 CNPY4Q8N129 248 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 TTC39CQ8N584 583 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 OTUD6BQ8N6M0 293 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 ANKLE1Q8NAG6 615 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 GLIS1Q8NBF1 620 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 CMASQ8NFW8 434 aaPredicted RBP9.72□□□□□ -0.85
DDB1-211ENST00000538280 PPTC7Q8NI37 304 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 ARHGEF2Q92974 986 aaKnown RBP9.72□□□□□ -0.85
DDB1-211ENST00000538280 ZBTB10Q96DT7 871 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 TMEM176AQ96HP8 235 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 PWWP2AQ96N64 755 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 TTC25Q96NG3 672 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 GUCD1Q96NT3 240 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 FAM118BQ9BPY3 351 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 FDXACB1Q9BRP7 624 aaPredicted RBP9.72□□□□□ -0.85
DDB1-211ENST00000538280 C16orf70Q9BSU1 422 aa9.72□□□□□ -0.85
DDB1-211ENST00000538280 SMYD3Q9H7B4 428 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms