RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 HP1BP3Q5SSJ5 553 aaPredicted RBP12.74□□□□□ -0.37
CPSF7-218ENST00000537641 PPP1R15BQ5SWA1 713 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 NBPF12Q5TAG4 269 aaPredicted RBP12.74□□□□□ -0.37
CPSF7-218ENST00000537641 ARHGEF16Q5VV41 709 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 SNX30Q5VWJ9 437 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 CWF19L1Q69YN2 538 aaKnown RBP12.74□□□□□ -0.37
CPSF7-218ENST00000537641 SPOPLQ6IQ16 392 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 DSTYKQ6XUX3 929 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 SAMD7Q7Z3H4 446 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 TEKT4Q8WW24 435 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 CPT1BQ92523 772 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 STMN2Q93045 179 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 MCUR1Q96AQ8 359 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 ATG4CQ96DT6 458 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 SYT15Q9BQS2 421 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 TMEM120AQ9BXJ8 343 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 ZNF518BQ9C0D4 1074 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 RNF146Q9NTX7 359 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.74□□□□□ -0.37
CPSF7-218ENST00000537641 SCOCQ9UIL1 159 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 DCTN4Q9UJW0 460 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 PCDHA10Q9Y5I2 948 aa12.74□□□□□ -0.37
CPSF7-218ENST00000537641 MYH9P35579 1960 aaKnown RBP12.73□□□□□ -0.37
CPSF7-218ENST00000537641 CFAP69A5D8W1 941 aa12.73□□□□□ -0.37
CPSF7-218ENST00000537641 SPDYE5A6NIY4 337 aa12.73□□□□□ -0.37
CPSF7-218ENST00000537641 KLF11O14901 512 aa12.73□□□□□ -0.37
CPSF7-218ENST00000537641 ATP9AO75110 1047 aa12.73□□□□□ -0.37
CPSF7-218ENST00000537641 SPAG6O75602 509 aa12.73□□□□□ -0.37
CPSF7-218ENST00000537641 FAM155BO75949 473 aa12.73□□□□□ -0.37
CPSF7-218ENST00000537641 STBD1O95210 358 aa12.73□□□□□ -0.37
CPSF7-218ENST00000537641 ZBTB7AO95365 584 aa12.73□□□□□ -0.37
CPSF7-218ENST00000537641 MT-ND3P03897 115 aa12.73□□□□□ -0.37
CPSF7-218ENST00000537641 TCF4P15884 667 aa12.73□□□□□ -0.37
CPSF7-218ENST00000537641 SSTR1P30872 391 aa12.73□□□□□ -0.37
CPSF7-218ENST00000537641 ETV4P43268 484 aa12.73□□□□□ -0.37
CPSF7-218ENST00000537641 RAP1GDS1P52306 607 aa12.73□□□□□ -0.37
CPSF7-218ENST00000537641 RPL7AP62424 266 aaKnown RBP12.73□□□□□ -0.37
CPSF7-218ENST00000537641 CDK18Q07002 472 aa12.73□□□□□ -0.37
CPSF7-218ENST00000537641 CBLBQ13191 982 aa12.73□□□□□ -0.37
CPSF7-218ENST00000537641 GSTA3Q16772 222 aa12.73□□□□□ -0.37
CPSF7-218ENST00000537641 LMBRD2Q68DH5 695 aaPredicted RBP12.73□□□□□ -0.37
CPSF7-218ENST00000537641 RHPN2Q8IUC4 686 aa12.73□□□□□ -0.37
CPSF7-218ENST00000537641 TRIM42Q8IWZ5 723 aa12.73□□□□□ -0.37
CPSF7-218ENST00000537641 VPS52Q8N1B4 723 aa12.73□□□□□ -0.37
CPSF7-218ENST00000537641 ZNF280CQ8ND82 737 aa12.73□□□□□ -0.37
CPSF7-218ENST00000537641 FBXO36Q8NEA4 188 aa12.73□□□□□ -0.37
CPSF7-218ENST00000537641 GPRASP2Q96D09 838 aa12.73□□□□□ -0.37
CPSF7-218ENST00000537641 MRRFQ96E11 262 aaKnown RBP12.73□□□□□ -0.37
CPSF7-218ENST00000537641 IFT43Q96FT9 208 aa12.73□□□□□ -0.37
CPSF7-218ENST00000537641 MCEEQ96PE7 176 aa12.73□□□□□ -0.37
CPSF7-218ENST00000537641 CYTH2Q99418 400 aa12.73□□□□□ -0.37
CPSF7-218ENST00000537641 TMEM121Q9BTD3 319 aa12.73□□□□□ -0.37
CPSF7-218ENST00000537641 XPNPEP1Q9NQW7 623 aa12.73□□□□□ -0.37
CPSF7-218ENST00000537641 PICK1Q9NRD5 415 aa12.73□□□□□ -0.37
CPSF7-218ENST00000537641 ANGPTL2Q9UKU9 493 aa12.73□□□□□ -0.37
CPSF7-218ENST00000537641 AGO2Q9UKV8 859 aaKnown RBP12.73□□□□□ -0.37
CPSF7-218ENST00000537641 NUMBLQ9Y6R0 609 aa12.73□□□□□ -0.37
CPSF7-218ENST00000537641 DOCK5Q9H7D0 1870 aa12.72□□□□□ -0.37
CPSF7-218ENST00000537641 A0A0G2JND7 137 aa12.72□□□□□ -0.37
CPSF7-218ENST00000537641 TESPA1A2RU30 521 aaPredicted RBP12.72□□□□□ -0.37
CPSF7-218ENST00000537641 WDR91A4D1P6 747 aa12.72□□□□□ -0.37
CPSF7-218ENST00000537641 MAGEA13PA6NCF6 341 aa12.72□□□□□ -0.37
CPSF7-218ENST00000537641 F8W8V4 182 aa12.72□□□□□ -0.37
CPSF7-218ENST00000537641 FZD9O00144 591 aa12.72□□□□□ -0.37
CPSF7-218ENST00000537641 MAFGO15525 162 aa12.72□□□□□ -0.37
CPSF7-218ENST00000537641 LPXNO60711 386 aa12.72□□□□□ -0.37
CPSF7-218ENST00000537641 MAGEC1O60732 1142 aa12.72□□□□□ -0.37
CPSF7-218ENST00000537641 SMIM24O75264 130 aa12.72□□□□□ -0.37
CPSF7-218ENST00000537641 KRT36O76013 467 aa12.72□□□□□ -0.37
CPSF7-218ENST00000537641 IFNB1P01574 187 aa12.72□□□□□ -0.37
CPSF7-218ENST00000537641 ATP5BP06576 529 aaKnown RBP12.72□□□□□ -0.37
CPSF7-218ENST00000537641 ESRRAP11474 423 aaPredicted RBP12.72□□□□□ -0.37
CPSF7-218ENST00000537641 CDH5P33151 784 aaPredicted RBP12.72□□□□□ -0.37
CPSF7-218ENST00000537641 TUBP50607 506 aa12.72□□□□□ -0.37
CPSF7-218ENST00000537641 PAPOLAP51003 745 aaKnown RBP12.72□□□□□ -0.37
CPSF7-218ENST00000537641 NLRP11P59045 1033 aaKnown RBP12.72□□□□□ -0.37
CPSF7-218ENST00000537641 ZBTB16Q05516 673 aa12.72□□□□□ -0.37
CPSF7-218ENST00000537641 OVGP1Q12889 678 aa12.72□□□□□ -0.37
CPSF7-218ENST00000537641 KPNB1Q14974 876 aaKnown RBP12.72□□□□□ -0.37
CPSF7-218ENST00000537641 FNBP1LQ5T0N5 605 aa12.72□□□□□ -0.37
CPSF7-218ENST00000537641 SLFN12LQ6IEE8 588 aa12.72□□□□□ -0.37
CPSF7-218ENST00000537641 DCUN1D2Q6PH85 259 aa12.72□□□□□ -0.37
CPSF7-218ENST00000537641 C3orf62Q6ZUJ4 267 aa12.72□□□□□ -0.37
CPSF7-218ENST00000537641 BBS12Q6ZW61 710 aa12.72□□□□□ -0.37
CPSF7-218ENST00000537641 VSIG10LQ86VR7 867 aa12.72□□□□□ -0.37
CPSF7-218ENST00000537641 APOBEC3FQ8IUX4 373 aaKnown RBP12.72□□□□□ -0.37
CPSF7-218ENST00000537641 PALM2Q8IXS6 379 aa12.72□□□□□ -0.37
CPSF7-218ENST00000537641 PDIK1LQ8N165 341 aa12.72□□□□□ -0.37
CPSF7-218ENST00000537641 TMEM35BQ8NCS4 154 aa12.72□□□□□ -0.37
CPSF7-218ENST00000537641 ZNF606Q8WXB4 792 aa12.72□□□□□ -0.37
CPSF7-218ENST00000537641 SCG3Q8WXD2 468 aaKnown RBP12.72□□□□□ -0.37
CPSF7-218ENST00000537641 C12orf42Q96LP6 360 aa12.72□□□□□ -0.37
CPSF7-218ENST00000537641 POLR3FQ9H1D9 316 aaPredicted RBP12.72□□□□□ -0.37
CPSF7-218ENST00000537641 KCNK13Q9HB14 408 aa12.72□□□□□ -0.37
CPSF7-218ENST00000537641 RBAKQ9NYW8 714 aaPredicted RBP12.72□□□□□ -0.37
CPSF7-218ENST00000537641 SLC17A7Q9P2U7 560 aa12.72□□□□□ -0.37
CPSF7-218ENST00000537641 GABBR1Q9UBS5 961 aa12.72□□□□□ -0.37
CPSF7-218ENST00000537641 STRIP2Q9ULQ0 834 aa12.72□□□□□ -0.37
CPSF7-218ENST00000537641 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.72□□□□□ -0.37
CPSF7-218ENST00000537641 PTPRJQ12913 1337 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms