RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 TTC9BQ8N6N2 239 aa25.68■■□□□ 1.7
HMGA2-208ENST00000537429 UBA3Q8TBC4 463 aa25.68■■□□□ 1.7
HMGA2-208ENST00000537429 DUSP16Q9BY84 665 aa25.68■■□□□ 1.7
HMGA2-208ENST00000537429 LHX5Q9H2C1 402 aa25.68■■□□□ 1.7
HMGA2-208ENST00000537429 TLE6Q9H808 572 aa25.68■■□□□ 1.7
HMGA2-208ENST00000537429 CSNK1G1Q9HCP0 422 aa25.68■■□□□ 1.7
HMGA2-208ENST00000537429 TMEM30AQ9NV96 361 aa25.68■■□□□ 1.7
HMGA2-208ENST00000537429 PLXNA3P51805 1871 aa25.67■■□□□ 1.7
HMGA2-208ENST00000537429 SZT2Q5T011 3432 aa25.67■■□□□ 1.7
HMGA2-208ENST00000537429 M0QYV0 167 aa25.67■■□□□ 1.7
HMGA2-208ENST00000537429 SEC24AO95486 1093 aa25.67■■□□□ 1.7
HMGA2-208ENST00000537429 GLUD1P00367 558 aa25.67■■□□□ 1.7
HMGA2-208ENST00000537429 FAM200BP0CF97 657 aa25.67■■□□□ 1.7
HMGA2-208ENST00000537429 POU3F3P20264 500 aaPredicted RBP25.67■■□□□ 1.7
HMGA2-208ENST00000537429 CACNA2D1P54289 1103 aa25.67■■□□□ 1.7
HMGA2-208ENST00000537429 BCAT1P54687 386 aa25.67■■□□□ 1.7
HMGA2-208ENST00000537429 DENND1BQ6P3S1 775 aa25.67■■□□□ 1.7
HMGA2-208ENST00000537429 VSTM1Q6UX27 236 aa25.67■■□□□ 1.7
HMGA2-208ENST00000537429 Q7L0L9 218 aa25.67■■□□□ 1.7
HMGA2-208ENST00000537429 GAS2L1Q99501 681 aaPredicted RBP25.67■■□□□ 1.7
HMGA2-208ENST00000537429 PDCL3Q9H2J4 239 aa25.67■■□□□ 1.7
HMGA2-208ENST00000537429 KRT82Q9NSB4 513 aa25.67■■□□□ 1.7
HMGA2-208ENST00000537429 SLC27A5Q9Y2P5 690 aa25.67■■□□□ 1.7
HMGA2-208ENST00000537429 AP1G2O75843 785 aa25.66■■□□□ 1.7
HMGA2-208ENST00000537429 BEST1O76090 585 aa25.66■■□□□ 1.7
HMGA2-208ENST00000537429 HAPLN1P10915 354 aaPredicted RBP25.66■■□□□ 1.7
HMGA2-208ENST00000537429 NPR3P17342 541 aa25.66■■□□□ 1.7
HMGA2-208ENST00000537429 TNFAIP3P21580 790 aa25.66■■□□□ 1.7
HMGA2-208ENST00000537429 EIF4A3P38919 411 aaKnown RBP25.66■■□□□ 1.7
HMGA2-208ENST00000537429 GPD2P43304 727 aa25.66■■□□□ 1.7
HMGA2-208ENST00000537429 DUSP6Q16828 381 aa25.66■■□□□ 1.7
HMGA2-208ENST00000537429 CLEC20AQ6ZU45 233 aa25.66■■□□□ 1.7
HMGA2-208ENST00000537429 TMEM139Q8IV31 216 aa25.66■■□□□ 1.7
HMGA2-208ENST00000537429 LRRC8AQ8IWT6 810 aa25.66■■□□□ 1.7
HMGA2-208ENST00000537429 TCEAL8Q8IYN2 117 aa25.66■■□□□ 1.7
HMGA2-208ENST00000537429 WDTC1Q8N5D0 677 aa25.66■■□□□ 1.7
HMGA2-208ENST00000537429 SLC22A17Q8WUG5 538 aa25.66■■□□□ 1.7
HMGA2-208ENST00000537429 PCDHB18PQ96TA0 734 aa25.66■■□□□ 1.7
HMGA2-208ENST00000537429 SMOQ99835 787 aa25.66■■□□□ 1.7
HMGA2-208ENST00000537429 NSUN3Q9H649 340 aaKnown RBP25.66■■□□□ 1.7
HMGA2-208ENST00000537429 FBXW11Q9UKB1 542 aa25.66■■□□□ 1.7
HMGA2-208ENST00000537429 ELF1P32519 619 aa25.65■■□□□ 1.7
HMGA2-208ENST00000537429 CDH5P33151 784 aaPredicted RBP25.65■■□□□ 1.7
HMGA2-208ENST00000537429 NRIP1P48552 1158 aa25.65■■□□□ 1.7
HMGA2-208ENST00000537429 PDE4CQ08493 712 aa25.65■■□□□ 1.7
HMGA2-208ENST00000537429 BST2Q10589 180 aaKnown RBP25.65■■□□□ 1.7
HMGA2-208ENST00000537429 ADGRE1Q14246 886 aa25.65■■□□□ 1.7
HMGA2-208ENST00000537429 ASTE1Q2TB18 679 aaPredicted RBP25.65■■□□□ 1.7
HMGA2-208ENST00000537429 MGAT5BQ3V5L5 792 aa25.65■■□□□ 1.7
HMGA2-208ENST00000537429 CYP26C1Q6V0L0 522 aa25.65■■□□□ 1.7
HMGA2-208ENST00000537429 TRIM72Q6ZMU5 477 aa25.65■■□□□ 1.7
HMGA2-208ENST00000537429 PASD1Q8IV76 773 aa25.65■■□□□ 1.7
HMGA2-208ENST00000537429 ZMIZ2Q8NF64 920 aa25.65■■□□□ 1.7
HMGA2-208ENST00000537429 SLC30A5Q8TAD4 765 aa25.65■■□□□ 1.7
HMGA2-208ENST00000537429 SLC35F5Q8WV83 523 aa25.65■■□□□ 1.7
HMGA2-208ENST00000537429 KCNK16Q96T55 309 aa25.65■■□□□ 1.7
HMGA2-208ENST00000537429 BAG1Q99933 345 aaPredicted RBP25.65■■□□□ 1.7
HMGA2-208ENST00000537429 NHEJ1Q9H9Q4 299 aaPredicted RBP25.65■■□□□ 1.7
HMGA2-208ENST00000537429 CYP4F11Q9HBI6 524 aa25.65■■□□□ 1.7
HMGA2-208ENST00000537429 ADAMTS1Q9UHI8 967 aa25.65■■□□□ 1.7
HMGA2-208ENST00000537429 DDX3XO00571 662 aaKnown RBP eCLIP25.64■■□□□ 1.7
HMGA2-208ENST00000537429 CYP1A1P04798 512 aaPredicted RBP25.64■■□□□ 1.7
HMGA2-208ENST00000537429 SPATA31D3P0C874 917 aa25.64■■□□□ 1.7
HMGA2-208ENST00000537429 SETSIPP0DME0 302 aa25.64■■□□□ 1.7
HMGA2-208ENST00000537429 TUFMP49411 452 aaKnown RBP25.64■■□□□ 1.7
HMGA2-208ENST00000537429 MAP3K7CLP57077 242 aa25.64■■□□□ 1.7
HMGA2-208ENST00000537429 SPATA31D4Q6ZUB0 917 aa25.64■■□□□ 1.7
HMGA2-208ENST00000537429 TMTC1Q8IUR5 882 aa25.64■■□□□ 1.7
HMGA2-208ENST00000537429 KREMEN2Q8NCW0 462 aa25.64■■□□□ 1.7
HMGA2-208ENST00000537429 SECISBP2LQ93073 1101 aaKnown RBP25.64■■□□□ 1.7
HMGA2-208ENST00000537429 CDCA3Q99618 268 aaPredicted RBP25.64■■□□□ 1.7
HMGA2-208ENST00000537429 DMAP1Q9NPF5 467 aaPredicted RBP25.64■■□□□ 1.7
HMGA2-208ENST00000537429 CEP83Q9Y592 693 aa25.64■■□□□ 1.7
HMGA2-208ENST00000537429 HCFC2Q9Y5Z7 792 aa25.64■■□□□ 1.7
HMGA2-208ENST00000537429 MTCH2Q9Y6C9 303 aa25.64■■□□□ 1.7
HMGA2-208ENST00000537429 LSM8O95777 96 aaKnown RBP25.63■■□□□ 1.69
HMGA2-208ENST00000537429 ANXA13P27216 316 aa25.63■■□□□ 1.69
HMGA2-208ENST00000537429 GRIK1P39086 918 aa25.63■■□□□ 1.69
HMGA2-208ENST00000537429 SLC8A3P57103 927 aa25.63■■□□□ 1.69
HMGA2-208ENST00000537429 NOMO3P69849 1222 aa25.63■■□□□ 1.69
HMGA2-208ENST00000537429 VPS36Q86VN1 386 aa25.63■■□□□ 1.69
HMGA2-208ENST00000537429 DEFB123Q8N688 67 aa25.63■■□□□ 1.69
HMGA2-208ENST00000537429 TMEM35BQ8NCS4 154 aa25.63■■□□□ 1.69
HMGA2-208ENST00000537429 IGFLR1Q9H665 355 aa25.63■■□□□ 1.69
HMGA2-208ENST00000537429 SEPT11Q9NVA2 429 aaKnown RBP25.63■■□□□ 1.69
HMGA2-208ENST00000537429 MTCL1Q9Y4B5 1905 aaKnown RBP25.63■■□□□ 1.69
HMGA2-208ENST00000537429 MYH10P35580 1976 aa25.63■■□□□ 1.69
HMGA2-208ENST00000537429 F8VP50 259 aa25.63■■□□□ 1.69
HMGA2-208ENST00000537429 TULP2O00295 520 aa25.63■■□□□ 1.69
HMGA2-208ENST00000537429 XPO1O14980 1071 aaKnown RBP25.63■■□□□ 1.69
HMGA2-208ENST00000537429 PTMAP06454 111 aaKnown RBP25.63■■□□□ 1.69
HMGA2-208ENST00000537429 UNGP13051 313 aaPredicted RBP25.63■■□□□ 1.69
HMGA2-208ENST00000537429 EPCAMP16422 314 aa25.63■■□□□ 1.69
HMGA2-208ENST00000537429 KCNC3Q14003 757 aa25.63■■□□□ 1.69
HMGA2-208ENST00000537429 SCN4BQ8IWT1 228 aa25.63■■□□□ 1.69
HMGA2-208ENST00000537429 C8orf48Q96LL4 319 aa25.63■■□□□ 1.69
HMGA2-208ENST00000537429 CCDC42Q96M95 316 aa25.63■■□□□ 1.69
HMGA2-208ENST00000537429 SEPT5Q99719 369 aaPredicted RBP25.63■■□□□ 1.69
HMGA2-208ENST00000537429 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.63■■□□□ 1.69
HMGA2-208ENST00000537429 UBXN6Q9BZV1 441 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms