RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 CDH9Q9ULB4 789 aa21.07■□□□□ 0.96
TNFRSF1B-204ENST00000536782 GREB1Q4ZG55 1949 aa21.06■□□□□ 0.96
TNFRSF1B-204ENST00000536782 ANAPC1Q9H1A4 1944 aa21.06■□□□□ 0.96
TNFRSF1B-204ENST00000536782 TRAV19A0A0A6YYK7 116 aa21.06■□□□□ 0.96
TNFRSF1B-204ENST00000536782 ATP2C2O75185 946 aa21.06■□□□□ 0.96
TNFRSF1B-204ENST00000536782 CKMP06732 381 aa21.06■□□□□ 0.96
TNFRSF1B-204ENST00000536782 LMO2P25791 158 aa21.06■□□□□ 0.96
TNFRSF1B-204ENST00000536782 HOXD13P35453 343 aa21.06■□□□□ 0.96
TNFRSF1B-204ENST00000536782 MTF1Q14872 753 aa21.06■□□□□ 0.96
TNFRSF1B-204ENST00000536782 MAPRE1Q15691 268 aaKnown RBP21.06■□□□□ 0.96
TNFRSF1B-204ENST00000536782 PKN3Q6P5Z2 889 aa21.06■□□□□ 0.96
TNFRSF1B-204ENST00000536782 CPA6Q8N4T0 437 aa21.06■□□□□ 0.96
TNFRSF1B-204ENST00000536782 IQUBQ8NA54 791 aa21.06■□□□□ 0.96
TNFRSF1B-204ENST00000536782 ZNF507Q8TCN5 953 aa21.06■□□□□ 0.96
TNFRSF1B-204ENST00000536782 EXOC4Q96A65 974 aa21.06■□□□□ 0.96
TNFRSF1B-204ENST00000536782 CYP2S1Q96SQ9 504 aa21.06■□□□□ 0.96
TNFRSF1B-204ENST00000536782 SEMA4GQ9NTN9 838 aa21.06■□□□□ 0.96
TNFRSF1B-204ENST00000536782 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.06■□□□□ 0.96
TNFRSF1B-204ENST00000536782 MYO16Q9Y6X6 1858 aa21.05■□□□□ 0.96
TNFRSF1B-204ENST00000536782 CUTAO60888 179 aa21.05■□□□□ 0.96
TNFRSF1B-204ENST00000536782 PSMC1P62191 440 aaKnown RBP21.05■□□□□ 0.96
TNFRSF1B-204ENST00000536782 ZNF77Q15935 545 aa21.05■□□□□ 0.96
TNFRSF1B-204ENST00000536782 CSRP2Q16527 193 aa21.05■□□□□ 0.96
TNFRSF1B-204ENST00000536782 FAM26FQ5R3K3 315 aa21.05■□□□□ 0.96
TNFRSF1B-204ENST00000536782 VSTM1Q6UX27 236 aa21.05■□□□□ 0.96
TNFRSF1B-204ENST00000536782 EPM2AIP1Q7L775 607 aaPredicted RBP21.05■□□□□ 0.96
TNFRSF1B-204ENST00000536782 TTC16Q8NEE8 873 aa21.05■□□□□ 0.96
TNFRSF1B-204ENST00000536782 OSCP1Q8WVF1 389 aa21.05■□□□□ 0.96
TNFRSF1B-204ENST00000536782 MYLPFQ96A32 169 aa21.05■□□□□ 0.96
TNFRSF1B-204ENST00000536782 SLC22A12Q96S37 553 aa21.05■□□□□ 0.96
TNFRSF1B-204ENST00000536782 MMS19Q96T76 1030 aa21.05■□□□□ 0.96
TNFRSF1B-204ENST00000536782 P2RY13Q9BPV8 354 aa21.05■□□□□ 0.96
TNFRSF1B-204ENST00000536782 ECT2Q9H8V3 914 aa21.05■□□□□ 0.96
TNFRSF1B-204ENST00000536782 CRTAC1Q9NQ79 661 aa21.05■□□□□ 0.96
TNFRSF1B-204ENST00000536782 DUS2Q9NX74 493 aaKnown RBP21.05■□□□□ 0.96
TNFRSF1B-204ENST00000536782 SLC8A2Q9UPR5 921 aa21.05■□□□□ 0.96
TNFRSF1B-204ENST00000536782 CCDC163A0A0D9SF12 145 aa21.04■□□□□ 0.96
TNFRSF1B-204ENST00000536782 YEATS4O95619 227 aa21.04■□□□□ 0.96
TNFRSF1B-204ENST00000536782 EGFP01133 1207 aa21.04■□□□□ 0.96
TNFRSF1B-204ENST00000536782 TNNI1P19237 187 aa21.04■□□□□ 0.96
TNFRSF1B-204ENST00000536782 DRD1P21728 446 aa21.04■□□□□ 0.96
TNFRSF1B-204ENST00000536782 WARSP23381 471 aaKnown RBP21.04■□□□□ 0.96
TNFRSF1B-204ENST00000536782 GJA4P35212 333 aa21.04■□□□□ 0.96
TNFRSF1B-204ENST00000536782 IFNAR2P48551 515 aa21.04■□□□□ 0.96
TNFRSF1B-204ENST00000536782 GALK1P51570 392 aa21.04■□□□□ 0.96
TNFRSF1B-204ENST00000536782 KCNB1Q14721 858 aa21.04■□□□□ 0.96
TNFRSF1B-204ENST00000536782 SNRNP35Q16560 246 aaKnown RBP21.04■□□□□ 0.96
TNFRSF1B-204ENST00000536782 CNNM4Q6P4Q7 775 aa21.04■□□□□ 0.96
TNFRSF1B-204ENST00000536782 TRAPPC11Q7Z392 1133 aa21.04■□□□□ 0.96
TNFRSF1B-204ENST00000536782 FAM160A2Q8N612 972 aaPredicted RBP21.04■□□□□ 0.96
TNFRSF1B-204ENST00000536782 ARL14EPQ8N8R7 260 aaPredicted RBP21.04■□□□□ 0.96
TNFRSF1B-204ENST00000536782 RDH13Q8NBN7 331 aa21.04■□□□□ 0.96
TNFRSF1B-204ENST00000536782 NETO1Q8TDF5 533 aa21.04■□□□□ 0.96
TNFRSF1B-204ENST00000536782 SPATA17Q96L03 361 aa21.04■□□□□ 0.96
TNFRSF1B-204ENST00000536782 CEP295NLQ96MC4 621 aa21.04■□□□□ 0.96
TNFRSF1B-204ENST00000536782 FNBP1Q96RU3 617 aa21.04■□□□□ 0.96
TNFRSF1B-204ENST00000536782 AGPAT3Q9NRZ7 376 aa21.04■□□□□ 0.96
TNFRSF1B-204ENST00000536782 GCNT4Q9P109 453 aa21.04■□□□□ 0.96
TNFRSF1B-204ENST00000536782 LAMA1P25391 3075 aa21.03■□□□□ 0.96
TNFRSF1B-204ENST00000536782 DCDC2BA2VCK2 349 aa21.03■□□□□ 0.96
TNFRSF1B-204ENST00000536782 C2orf78A6NCI8 922 aa21.03■□□□□ 0.96
TNFRSF1B-204ENST00000536782 TGFB1I1O43294 461 aa21.03■□□□□ 0.96
TNFRSF1B-204ENST00000536782 FOXD2O60548 495 aaPredicted RBP21.03■□□□□ 0.96
TNFRSF1B-204ENST00000536782 RNF40O75150 1001 aa21.03■□□□□ 0.96
TNFRSF1B-204ENST00000536782 PDGFRBP09619 1106 aa21.03■□□□□ 0.96
TNFRSF1B-204ENST00000536782 DLATP10515 647 aaKnown RBP21.03■□□□□ 0.96
TNFRSF1B-204ENST00000536782 BDNFP23560 247 aa21.03■□□□□ 0.96
TNFRSF1B-204ENST00000536782 GRIK1P39086 918 aa21.03■□□□□ 0.96
TNFRSF1B-204ENST00000536782 PXNP49023 591 aaPredicted RBP21.03■□□□□ 0.96
TNFRSF1B-204ENST00000536782 PDE6CP51160 858 aa21.03■□□□□ 0.96
TNFRSF1B-204ENST00000536782 CYP27A1Q02318 531 aa21.03■□□□□ 0.96
TNFRSF1B-204ENST00000536782 USP4Q13107 963 aa21.03■□□□□ 0.96
TNFRSF1B-204ENST00000536782 FBXO43Q4G163 708 aa21.03■□□□□ 0.96
TNFRSF1B-204ENST00000536782 SHC4Q6S5L8 630 aa21.03■□□□□ 0.96
TNFRSF1B-204ENST00000536782 PRR23CQ6ZRP0 262 aa21.03■□□□□ 0.96
TNFRSF1B-204ENST00000536782 ATP2A3Q93084 1043 aa21.03■□□□□ 0.96
TNFRSF1B-204ENST00000536782 C7orf25Q9BPX7 421 aa21.03■□□□□ 0.96
TNFRSF1B-204ENST00000536782 FBRSL1Q9HCM7 1045 aaKnown RBP21.03■□□□□ 0.96
TNFRSF1B-204ENST00000536782 UBE4BO95155 1302 aa21.03■□□□□ 0.96
TNFRSF1B-204ENST00000536782 KIAA1549LQ6ZVL6 1849 aa21.02■□□□□ 0.96
TNFRSF1B-204ENST00000536782 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.02■□□□□ 0.96
TNFRSF1B-204ENST00000536782 HDCP19113 662 aa21.02■□□□□ 0.96
TNFRSF1B-204ENST00000536782 ANXA13P27216 316 aa21.02■□□□□ 0.96
TNFRSF1B-204ENST00000536782 SNRPFP62306 86 aaKnown RBP21.02■□□□□ 0.96
TNFRSF1B-204ENST00000536782 DENND5BQ6ZUT9 1274 aa21.02■□□□□ 0.96
TNFRSF1B-204ENST00000536782 NELFCDQ8IXH7 590 aa21.02■□□□□ 0.96
TNFRSF1B-204ENST00000536782 MYCBPAPQ8TBZ2 947 aa21.02■□□□□ 0.96
TNFRSF1B-204ENST00000536782 SH3RF2Q8TEC5 729 aa21.02■□□□□ 0.96
TNFRSF1B-204ENST00000536782 GAB3Q8WWW8 586 aa21.02■□□□□ 0.96
TNFRSF1B-204ENST00000536782 PCED1BQ96HM7 432 aa21.02■□□□□ 0.96
TNFRSF1B-204ENST00000536782 SNX25Q9H3E2 840 aa21.02■□□□□ 0.96
TNFRSF1B-204ENST00000536782 MAGEF1Q9HAY2 307 aa21.02■□□□□ 0.96
TNFRSF1B-204ENST00000536782 EHD2Q9NZN4 543 aa21.02■□□□□ 0.96
TNFRSF1B-204ENST00000536782 WNT6Q9Y6F9 365 aa21.02■□□□□ 0.96
TNFRSF1B-204ENST00000536782 TRIM66O15016 1216 aa21.01■□□□□ 0.95
TNFRSF1B-204ENST00000536782 CLIC2O15247 247 aa21.01■□□□□ 0.95
TNFRSF1B-204ENST00000536782 RPP40O75818 363 aaKnown RBP21.01■□□□□ 0.95
TNFRSF1B-204ENST00000536782 CST3P01034 146 aaPredicted RBP21.01■□□□□ 0.95
TNFRSF1B-204ENST00000536782 TCF3P15923 654 aa21.01■□□□□ 0.95
TNFRSF1B-204ENST00000536782 GNL1P36915 607 aaPredicted RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms