RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 DEFB115Q30KQ5 88 aa6.81□□□□□ -1.32
CLIP1-207ENST00000536634 PCSK4Q6UW60 755 aa6.81□□□□□ -1.32
CLIP1-207ENST00000536634 PRR18Q8N4B5 295 aa6.81□□□□□ -1.32
CLIP1-207ENST00000536634 IL17RDQ8NFM7 739 aa6.81□□□□□ -1.32
CLIP1-207ENST00000536634 CHFRQ96EP1 664 aa6.81□□□□□ -1.32
CLIP1-207ENST00000536634 TTPALQ9BTX7 342 aa6.81□□□□□ -1.32
CLIP1-207ENST00000536634 TLR10Q9BXR5 811 aa6.81□□□□□ -1.32
CLIP1-207ENST00000536634 GTPBP4Q9BZE4 634 aaKnown RBP6.81□□□□□ -1.32
CLIP1-207ENST00000536634 WDR11Q9BZH6 1224 aa6.81□□□□□ -1.32
CLIP1-207ENST00000536634 SERHL2Q9H4I8 314 aa6.81□□□□□ -1.32
CLIP1-207ENST00000536634 TCF7L1Q9HCS4 588 aa6.81□□□□□ -1.32
CLIP1-207ENST00000536634 RANBP2P49792 3224 aaKnown RBP6.81□□□□□ -1.32
CLIP1-207ENST00000536634 MRC1P22897 1456 aa6.8□□□□□ -1.32
CLIP1-207ENST00000536634 ABLIM3O94929 683 aa6.8□□□□□ -1.32
CLIP1-207ENST00000536634 AGFG2O95081 481 aa6.8□□□□□ -1.32
CLIP1-207ENST00000536634 HLA-DOAP06340 250 aa6.8□□□□□ -1.32
CLIP1-207ENST00000536634 POU2F2P09086 479 aa6.8□□□□□ -1.32
CLIP1-207ENST00000536634 PF4V1P10720 104 aa6.8□□□□□ -1.32
CLIP1-207ENST00000536634 MALP21145 153 aa6.8□□□□□ -1.32
CLIP1-207ENST00000536634 INHBCP55103 352 aa6.8□□□□□ -1.32
CLIP1-207ENST00000536634 CXADRP78310 365 aa6.8□□□□□ -1.32
CLIP1-207ENST00000536634 GUCY1B3Q02153 619 aa6.8□□□□□ -1.32
CLIP1-207ENST00000536634 SLC39A6Q13433 755 aa6.8□□□□□ -1.32
CLIP1-207ENST00000536634 PLEKHO1Q53GL0 409 aaPredicted RBP6.8□□□□□ -1.32
CLIP1-207ENST00000536634 UTP14CQ5TAP6 766 aaKnown RBP6.8□□□□□ -1.32
CLIP1-207ENST00000536634 TBC1D9BQ66K14 1250 aa6.8□□□□□ -1.32
CLIP1-207ENST00000536634 LAIR1Q6GTX8 287 aa6.8□□□□□ -1.32
CLIP1-207ENST00000536634 PRR5LQ6MZQ0 368 aa6.8□□□□□ -1.32
CLIP1-207ENST00000536634 USP45Q70EL2 814 aa6.8□□□□□ -1.32
CLIP1-207ENST00000536634 CNTROBQ8N137 903 aa6.8□□□□□ -1.32
CLIP1-207ENST00000536634 NLGN4YQ8NFZ3 816 aaPredicted RBP6.8□□□□□ -1.32
CLIP1-207ENST00000536634 NUP133Q8WUM0 1156 aa6.8□□□□□ -1.32
CLIP1-207ENST00000536634 ASB10Q8WXI3 467 aa6.8□□□□□ -1.32
CLIP1-207ENST00000536634 NACC2Q96BF6 587 aa6.8□□□□□ -1.32
CLIP1-207ENST00000536634 RNF31Q96EP0 1072 aa6.8□□□□□ -1.32
CLIP1-207ENST00000536634 CEP89Q96ST8 783 aa6.8□□□□□ -1.32
CLIP1-207ENST00000536634 PRRX2Q99811 253 aa6.8□□□□□ -1.32
CLIP1-207ENST00000536634 PACSIN1Q9BY11 444 aa6.8□□□□□ -1.32
CLIP1-207ENST00000536634 ALOXE3Q9BYJ1 711 aa6.8□□□□□ -1.32
CLIP1-207ENST00000536634 ABT1Q9ULW3 272 aaKnown RBP6.8□□□□□ -1.32
CLIP1-207ENST00000536634 UBR2Q8IWV8 1755 aa6.8□□□□□ -1.32
CLIP1-207ENST00000536634 RNF123Q5XPI4 1314 aa6.79□□□□□ -1.32
CLIP1-207ENST00000536634 NT5C1B-RDH14C9J2C7 533 aa6.79□□□□□ -1.32
CLIP1-207ENST00000536634 SLC43A1O75387 559 aa6.79□□□□□ -1.32
CLIP1-207ENST00000536634 CDKL5O76039 1030 aa6.79□□□□□ -1.32
CLIP1-207ENST00000536634 ZFPL1O95159 310 aa6.79□□□□□ -1.32
CLIP1-207ENST00000536634 GPANK1O95872 356 aa6.79□□□□□ -1.32
CLIP1-207ENST00000536634 EPHX2P34913 555 aa6.79□□□□□ -1.32
CLIP1-207ENST00000536634 TNNT2P45379 298 aaPredicted RBP6.79□□□□□ -1.32
CLIP1-207ENST00000536634 SCAPQ12770 1279 aa6.79□□□□□ -1.32
CLIP1-207ENST00000536634 GRM1Q13255 1194 aa6.79□□□□□ -1.32
CLIP1-207ENST00000536634 SLC4A10Q6U841 1118 aa6.79□□□□□ -1.32
CLIP1-207ENST00000536634 OLFM4Q6UX06 510 aa6.79□□□□□ -1.32
CLIP1-207ENST00000536634 MRGPRGQ86SM5 289 aa6.79□□□□□ -1.32
CLIP1-207ENST00000536634 CAPNS2Q96L46 248 aa6.79□□□□□ -1.32
CLIP1-207ENST00000536634 BRIP1Q9BX63 1249 aa6.79□□□□□ -1.32
CLIP1-207ENST00000536634 RTFDC1Q9BY42 306 aaPredicted RBP6.79□□□□□ -1.32
CLIP1-207ENST00000536634 RHOBTB2Q9BYZ6 727 aa6.79□□□□□ -1.32
CLIP1-207ENST00000536634 VSX1Q9NZR4 365 aaPredicted RBP6.79□□□□□ -1.32
CLIP1-207ENST00000536634 JKAMPQ9P055 326 aa6.79□□□□□ -1.32
CLIP1-207ENST00000536634 HACL1Q9UJ83 578 aa6.79□□□□□ -1.32
CLIP1-207ENST00000536634 TRPM7Q96QT4 1865 aa6.79□□□□□ -1.32
CLIP1-207ENST00000536634 COL4A5P29400 1685 aa6.78□□□□□ -1.32
CLIP1-207ENST00000536634 F2RL2O00254 374 aa6.78□□□□□ -1.32
CLIP1-207ENST00000536634 RPLP2P05387 115 aaKnown RBP6.78□□□□□ -1.32
CLIP1-207ENST00000536634 PIN1Q13526 163 aaPredicted RBP6.78□□□□□ -1.32
CLIP1-207ENST00000536634 AMOTQ4VCS5 1084 aa6.78□□□□□ -1.32
CLIP1-207ENST00000536634 C1orf141Q5JVX7 400 aa6.78□□□□□ -1.32
CLIP1-207ENST00000536634 Q6YL49 198 aa6.78□□□□□ -1.32
CLIP1-207ENST00000536634 ZNF365Q70YC5 407 aa6.78□□□□□ -1.32
CLIP1-207ENST00000536634 RAVER1Q8IY67 606 aaKnown RBP6.78□□□□□ -1.32
CLIP1-207ENST00000536634 BEND2Q8NDZ0 799 aa6.78□□□□□ -1.32
CLIP1-207ENST00000536634 TMIEQ8NEW7 156 aa6.78□□□□□ -1.32
CLIP1-207ENST00000536634 KLHL32Q96NJ5 620 aa6.78□□□□□ -1.32
CLIP1-207ENST00000536634 DDX21Q9NR30 783 aaKnown RBP eCLIP6.78□□□□□ -1.32
CLIP1-207ENST00000536634 KCNE5Q9UJ90 142 aa6.78□□□□□ -1.32
CLIP1-207ENST00000536634 PCDHA3Q9Y5H8 950 aa6.78□□□□□ -1.32
CLIP1-207ENST00000536634 COL6A3P12111 3177 aa6.78□□□□□ -1.32
CLIP1-207ENST00000536634 BCORQ6W2J9 1755 aa6.77□□□□□ -1.33
CLIP1-207ENST00000536634 LAMA3Q16787 3333 aa6.77□□□□□ -1.33
CLIP1-207ENST00000536634 TMEM191CA6NGB0 347 aa6.77□□□□□ -1.33
CLIP1-207ENST00000536634 AKAP10O43572 662 aa6.77□□□□□ -1.33
CLIP1-207ENST00000536634 B3GALT2O43825 422 aa6.77□□□□□ -1.33
CLIP1-207ENST00000536634 DTNBO60941 627 aa6.77□□□□□ -1.33
CLIP1-207ENST00000536634 SRGNP10124 158 aa6.77□□□□□ -1.33
CLIP1-207ENST00000536634 RAB27AP51159 221 aa6.77□□□□□ -1.33
CLIP1-207ENST00000536634 EIF5P55010 431 aaKnown RBP6.77□□□□□ -1.33
CLIP1-207ENST00000536634 NOGQ13253 232 aa6.77□□□□□ -1.33
CLIP1-207ENST00000536634 CYP2A13Q16696 494 aa6.77□□□□□ -1.33
CLIP1-207ENST00000536634 CST9Q5W186 159 aa6.77□□□□□ -1.33
CLIP1-207ENST00000536634 GPR149Q86SP6 731 aa6.77□□□□□ -1.33
CLIP1-207ENST00000536634 C3orf20Q8ND61 904 aa6.77□□□□□ -1.33
CLIP1-207ENST00000536634 RGMAQ96B86 450 aa6.77□□□□□ -1.33
CLIP1-207ENST00000536634 PNKPQ96T60 521 aa6.77□□□□□ -1.33
CLIP1-207ENST00000536634 CDYLQ9Y232 598 aa6.77□□□□□ -1.33
CLIP1-207ENST00000536634 ANKRD6Q9Y2G4 727 aa6.77□□□□□ -1.33
CLIP1-207ENST00000536634 MTO1Q9Y2Z2 717 aaKnown RBP6.77□□□□□ -1.33
CLIP1-207ENST00000536634 NOX1Q9Y5S8 564 aa6.77□□□□□ -1.33
CLIP1-207ENST00000536634 COL4A3Q01955 1670 aa6.77□□□□□ -1.33
CLIP1-207ENST00000536634 SNED1Q8TER0 1413 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms