RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 AMOTL1Q8IY63 956 aa3.18□□□□□ -1.9
SKA3-207ENST00000536239 FTSJ3Q8IY81 847 aaKnown RBP3.18□□□□□ -1.9
SKA3-207ENST00000536239 DCP1BQ8IZD4 617 aaKnown RBP3.18□□□□□ -1.9
SKA3-207ENST00000536239 CAMK1GQ96NX5 476 aa3.18□□□□□ -1.9
SKA3-207ENST00000536239 SIGLEC11Q96RL6 698 aa3.18□□□□□ -1.9
SKA3-207ENST00000536239 VRK1Q99986 396 aaPredicted RBP3.18□□□□□ -1.9
SKA3-207ENST00000536239 EFHD1Q9BUP0 239 aa3.18□□□□□ -1.9
SKA3-207ENST00000536239 SLCO5A1Q9H2Y9 848 aa3.18□□□□□ -1.9
SKA3-207ENST00000536239 GLOD4Q9HC38 313 aa3.18□□□□□ -1.9
SKA3-207ENST00000536239 PI4KBQ9UBF8 816 aa3.18□□□□□ -1.9
SKA3-207ENST00000536239 SERTAD3Q9UJW9 196 aa3.18□□□□□ -1.9
SKA3-207ENST00000536239 CCNL1Q9UK58 526 aaPredicted RBP3.18□□□□□ -1.9
SKA3-207ENST00000536239 LIMCH1Q9UPQ0 1083 aa3.18□□□□□ -1.9
SKA3-207ENST00000536239 SSX2IPQ9Y2D8 614 aa3.18□□□□□ -1.9
SKA3-207ENST00000536239 MRPL42Q9Y6G3 142 aaKnown RBP3.18□□□□□ -1.9
SKA3-207ENST00000536239 ARID4BQ4LE39 1312 aaPredicted RBP3.18□□□□□ -1.9
SKA3-207ENST00000536239 C4orf47A7E2U8 309 aa3.17□□□□□ -1.9
SKA3-207ENST00000536239 PPM1GO15355 546 aaPredicted RBP3.17□□□□□ -1.9
SKA3-207ENST00000536239 HTRA2O43464 458 aaPredicted RBP3.17□□□□□ -1.9
SKA3-207ENST00000536239 NDUFS2O75306 463 aa3.17□□□□□ -1.9
SKA3-207ENST00000536239 HSP90AA1P07900 732 aaKnown RBP3.17□□□□□ -1.9
SKA3-207ENST00000536239 EDNRBP24530 442 aa3.17□□□□□ -1.9
SKA3-207ENST00000536239 PHKA1P46020 1223 aa3.17□□□□□ -1.9
SKA3-207ENST00000536239 SLC16A1P53985 500 aa3.17□□□□□ -1.9
SKA3-207ENST00000536239 KIF22Q14807 665 aa3.17□□□□□ -1.9
SKA3-207ENST00000536239 C3orf36Q3SXR2 165 aa3.17□□□□□ -1.9
SKA3-207ENST00000536239 DGKKQ5KSL6 1271 aa3.17□□□□□ -1.9
SKA3-207ENST00000536239 ATG9BQ674R7 924 aa3.17□□□□□ -1.9
SKA3-207ENST00000536239 SLC4A10Q6U841 1118 aa3.17□□□□□ -1.9
SKA3-207ENST00000536239 MTHFD1LQ6UB35 978 aa3.17□□□□□ -1.9
SKA3-207ENST00000536239 USP37Q86T82 979 aa3.17□□□□□ -1.9
SKA3-207ENST00000536239 ZNF548Q8NEK5 533 aaPredicted RBP3.17□□□□□ -1.9
SKA3-207ENST00000536239 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.17□□□□□ -1.9
SKA3-207ENST00000536239 ZNF398Q8TD17 642 aa3.17□□□□□ -1.9
SKA3-207ENST00000536239 XAGE5Q8WWM1 108 aa3.17□□□□□ -1.9
SKA3-207ENST00000536239 ATG4AQ8WYN0 398 aa3.17□□□□□ -1.9
SKA3-207ENST00000536239 GLG1Q92896 1179 aa3.17□□□□□ -1.9
SKA3-207ENST00000536239 KAT5Q92993 513 aa3.17□□□□□ -1.9
SKA3-207ENST00000536239 R3HDM4Q96D70 268 aa3.17□□□□□ -1.9
SKA3-207ENST00000536239 LENG8Q96PV6 779 aaPredicted RBP3.17□□□□□ -1.9
SKA3-207ENST00000536239 CAAP1Q9H8G2 361 aa3.17□□□□□ -1.9
SKA3-207ENST00000536239 HEY2Q9UBP5 337 aa3.17□□□□□ -1.9
SKA3-207ENST00000536239 PRDM4Q9UKN5 801 aa3.17□□□□□ -1.9
SKA3-207ENST00000536239 LOC105371045A0A1W2PR82 267 aa3.16□□□□□ -1.9
SKA3-207ENST00000536239 TRIM75PA6NK02 468 aa3.16□□□□□ -1.9
SKA3-207ENST00000536239 B4DGG1 531 aa3.16□□□□□ -1.9
SKA3-207ENST00000536239 TMEM232C9JQI7 657 aa3.16□□□□□ -1.9
SKA3-207ENST00000536239 TLR2O60603 784 aa3.16□□□□□ -1.9
SKA3-207ENST00000536239 EYA4O95677 639 aa3.16□□□□□ -1.9
SKA3-207ENST00000536239 TGFB3P10600 412 aa3.16□□□□□ -1.9
SKA3-207ENST00000536239 ME1P48163 572 aa3.16□□□□□ -1.9
SKA3-207ENST00000536239 ALDH5A1P51649 535 aaPredicted RBP3.16□□□□□ -1.9
SKA3-207ENST00000536239 TPTEP56180 551 aa3.16□□□□□ -1.9
SKA3-207ENST00000536239 ZNF91Q05481 1191 aa3.16□□□□□ -1.9
SKA3-207ENST00000536239 FAM187BQ17R55 369 aa3.16□□□□□ -1.9
SKA3-207ENST00000536239 L1TD1Q5T7N2 865 aaKnown RBP3.16□□□□□ -1.9
SKA3-207ENST00000536239 ZNF549Q6P9A3 640 aa3.16□□□□□ -1.9
SKA3-207ENST00000536239 DEF8Q6ZN54 512 aa3.16□□□□□ -1.9
SKA3-207ENST00000536239 LHFPL2Q6ZUX7 228 aa3.16□□□□□ -1.9
SKA3-207ENST00000536239 AFAP1L2Q8N4X5 818 aa3.16□□□□□ -1.9
SKA3-207ENST00000536239 ADAMTS18Q8TE60 1221 aa3.16□□□□□ -1.9
SKA3-207ENST00000536239 NSUN6Q8TEA1 469 aaKnown RBP3.16□□□□□ -1.9
SKA3-207ENST00000536239 CIPCQ9C0C6 399 aa3.16□□□□□ -1.9
SKA3-207ENST00000536239 FAM234AQ9H0X4 552 aa3.16□□□□□ -1.9
SKA3-207ENST00000536239 SLAMF7Q9NQ25 335 aa3.16□□□□□ -1.9
SKA3-207ENST00000536239 TMEM184CQ9NVA4 438 aa3.16□□□□□ -1.9
SKA3-207ENST00000536239 CCDC154A6NI56 674 aa3.15□□□□□ -1.91
SKA3-207ENST00000536239 K7ESF4 209 aa3.15□□□□□ -1.91
SKA3-207ENST00000536239 RPLP2P05387 115 aaKnown RBP3.15□□□□□ -1.91
SKA3-207ENST00000536239 DLDP09622 509 aaKnown RBP3.15□□□□□ -1.91
SKA3-207ENST00000536239 CYP19A1P11511 503 aaPredicted RBP3.15□□□□□ -1.91
SKA3-207ENST00000536239 C5AR1P21730 350 aa3.15□□□□□ -1.91
SKA3-207ENST00000536239 SMARCA1P28370 1054 aa3.15□□□□□ -1.91
SKA3-207ENST00000536239 PPIFP30405 207 aaKnown RBP3.15□□□□□ -1.91
SKA3-207ENST00000536239 SOX5P35711 763 aa3.15□□□□□ -1.91
SKA3-207ENST00000536239 PIK3CGP48736 1102 aa3.15□□□□□ -1.91
SKA3-207ENST00000536239 GYS2P54840 703 aa3.15□□□□□ -1.91
SKA3-207ENST00000536239 CLUL1Q15846 466 aa3.15□□□□□ -1.91
SKA3-207ENST00000536239 ZNF585BQ52M93 769 aa3.15□□□□□ -1.91
SKA3-207ENST00000536239 ARHGAP40Q5TG30 622 aa3.15□□□□□ -1.91
SKA3-207ENST00000536239 DAB2IPQ5VWQ8 1189 aa3.15□□□□□ -1.91
SKA3-207ENST00000536239 FAM160B1Q5W0V3 765 aa3.15□□□□□ -1.91
SKA3-207ENST00000536239 COLCA1Q6ZS62 124 aa3.15□□□□□ -1.91
SKA3-207ENST00000536239 JAZF1Q86VZ6 243 aa3.15□□□□□ -1.91
SKA3-207ENST00000536239 SLC15A3Q8IY34 581 aa3.15□□□□□ -1.91
SKA3-207ENST00000536239 PELI3Q8N2H9 469 aa3.15□□□□□ -1.91
SKA3-207ENST00000536239 ARFGAP1Q8N6T3 406 aa3.15□□□□□ -1.91
SKA3-207ENST00000536239 OSR1Q8TAX0 266 aaPredicted RBP3.15□□□□□ -1.91
SKA3-207ENST00000536239 JADE3Q92613 823 aa3.15□□□□□ -1.91
SKA3-207ENST00000536239 DDX17Q92841 729 aaKnown RBP3.15□□□□□ -1.91
SKA3-207ENST00000536239 SLC46A1Q96NT5 459 aa3.15□□□□□ -1.91
SKA3-207ENST00000536239 PUS7Q96PZ0 661 aaKnown RBP3.15□□□□□ -1.91
SKA3-207ENST00000536239 FYTTD1Q96QD9 318 aaKnown RBP3.15□□□□□ -1.91
SKA3-207ENST00000536239 PTDSS2Q9BVG9 487 aa3.15□□□□□ -1.91
SKA3-207ENST00000536239 C1orf43Q9BWL3 253 aa3.15□□□□□ -1.91
SKA3-207ENST00000536239 PDCL3Q9H2J4 239 aa3.15□□□□□ -1.91
SKA3-207ENST00000536239 TFCP2L1Q9NZI6 479 aa3.15□□□□□ -1.91
SKA3-207ENST00000536239 GABRQQ9UN88 632 aa3.15□□□□□ -1.91
SKA3-207ENST00000536239 HS3ST3B1Q9Y662 390 aa3.15□□□□□ -1.91
SKA3-207ENST00000536239 BTBD19C9JJ37 291 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms