RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 SH3RF2Q8TEC5 729 aa13.9□□□□□ -0.18
TNFRSF1A-207ENST00000535958 TCEAL3Q969E4 200 aa13.9□□□□□ -0.18
TNFRSF1A-207ENST00000535958 MYRFLQ96LU7 910 aa13.9□□□□□ -0.18
TNFRSF1A-207ENST00000535958 MTMR12Q9C0I1 747 aa13.9□□□□□ -0.18
TNFRSF1A-207ENST00000535958 DUSP15Q9H1R2 295 aaPredicted RBP13.9□□□□□ -0.18
TNFRSF1A-207ENST00000535958 MAGEC2Q9UBF1 373 aaPredicted RBP13.9□□□□□ -0.18
TNFRSF1A-207ENST00000535958 CIZ1Q9ULV3 898 aaPredicted RBP13.9□□□□□ -0.18
TNFRSF1A-207ENST00000535958 ATG2BQ96BY7 2078 aa13.9□□□□□ -0.18
TNFRSF1A-207ENST00000535958 CNOT1A5YKK6 2376 aaKnown RBP13.89□□□□□ -0.19
TNFRSF1A-207ENST00000535958 GOLGA8IPA6NC78 632 aa13.89□□□□□ -0.19
TNFRSF1A-207ENST00000535958 GOLGA8JA6NMD2 632 aa13.89□□□□□ -0.19
TNFRSF1A-207ENST00000535958 ALDH1A2O94788 518 aa13.89□□□□□ -0.19
TNFRSF1A-207ENST00000535958 HDCP19113 662 aa13.89□□□□□ -0.19
TNFRSF1A-207ENST00000535958 GRIK1P39086 918 aa13.89□□□□□ -0.19
TNFRSF1A-207ENST00000535958 NOVA1P51513 510 aaKnown RBP13.89□□□□□ -0.19
TNFRSF1A-207ENST00000535958 SEC13P55735 322 aa13.89□□□□□ -0.19
TNFRSF1A-207ENST00000535958 MAPRE1Q15691 268 aaKnown RBP13.89□□□□□ -0.19
TNFRSF1A-207ENST00000535958 EML3Q32P44 896 aa13.89□□□□□ -0.19
TNFRSF1A-207ENST00000535958 STXBP4Q6ZWJ1 553 aa13.89□□□□□ -0.19
TNFRSF1A-207ENST00000535958 CYP2U1Q7Z449 544 aa13.89□□□□□ -0.19
TNFRSF1A-207ENST00000535958 RIN3Q8TB24 985 aa13.89□□□□□ -0.19
TNFRSF1A-207ENST00000535958 EPSTI1Q96J88 318 aa13.89□□□□□ -0.19
TNFRSF1A-207ENST00000535958 SPACA7Q96KW9 195 aa13.89□□□□□ -0.19
TNFRSF1A-207ENST00000535958 CYP2S1Q96SQ9 504 aa13.89□□□□□ -0.19
TNFRSF1A-207ENST00000535958 SYT15Q9BQS2 421 aa13.89□□□□□ -0.19
TNFRSF1A-207ENST00000535958 LSM14BQ9BX40 385 aaKnown RBP13.89□□□□□ -0.19
TNFRSF1A-207ENST00000535958 TPSD1Q9BZJ3 242 aa13.89□□□□□ -0.19
TNFRSF1A-207ENST00000535958 IKZF4Q9H2S9 585 aa13.89□□□□□ -0.19
TNFRSF1A-207ENST00000535958 FBRSL1Q9HCM7 1045 aaKnown RBP13.89□□□□□ -0.19
TNFRSF1A-207ENST00000535958 POLR3BQ9NW08 1133 aaPredicted RBP13.89□□□□□ -0.19
TNFRSF1A-207ENST00000535958 GDAP2Q9NXN4 497 aa13.89□□□□□ -0.19
TNFRSF1A-207ENST00000535958 TRPM5Q9NZQ8 1165 aa13.89□□□□□ -0.19
TNFRSF1A-207ENST00000535958 EBF1Q9UH73 591 aa13.89□□□□□ -0.19
TNFRSF1A-207ENST00000535958 BCLAF3A2AJT9 711 aaKnown RBP13.88□□□□□ -0.19
TNFRSF1A-207ENST00000535958 KHNYNO15037 678 aaKnown RBP13.88□□□□□ -0.19
TNFRSF1A-207ENST00000535958 DCLK1O15075 740 aa13.88□□□□□ -0.19
TNFRSF1A-207ENST00000535958 PPP1R37O75864 691 aa13.88□□□□□ -0.19
TNFRSF1A-207ENST00000535958 CLSTN1O94985 981 aa13.88□□□□□ -0.19
TNFRSF1A-207ENST00000535958 STAT6P42226 847 aa13.88□□□□□ -0.19
TNFRSF1A-207ENST00000535958 PSMC1P62191 440 aaKnown RBP13.88□□□□□ -0.19
TNFRSF1A-207ENST00000535958 SHC2P98077 582 aa13.88□□□□□ -0.19
TNFRSF1A-207ENST00000535958 CYP27A1Q02318 531 aa13.88□□□□□ -0.19
TNFRSF1A-207ENST00000535958 SURF1Q15526 300 aa13.88□□□□□ -0.19
TNFRSF1A-207ENST00000535958 C8orf34Q49A92 452 aa13.88□□□□□ -0.19
TNFRSF1A-207ENST00000535958 C2orf27AQ580R0 203 aa13.88□□□□□ -0.19
TNFRSF1A-207ENST00000535958 LMBRD2Q68DH5 695 aaPredicted RBP13.88□□□□□ -0.19
TNFRSF1A-207ENST00000535958 NAIF1Q69YI7 327 aaPredicted RBP13.88□□□□□ -0.19
TNFRSF1A-207ENST00000535958 ANO7Q6IWH7 933 aa13.88□□□□□ -0.19
TNFRSF1A-207ENST00000535958 VSTM1Q6UX27 236 aa13.88□□□□□ -0.19
TNFRSF1A-207ENST00000535958 CCDC73Q6ZRK6 1079 aa13.88□□□□□ -0.19
TNFRSF1A-207ENST00000535958 OSTM1Q86WC4 334 aa13.88□□□□□ -0.19
TNFRSF1A-207ENST00000535958 GPD1LQ8N335 351 aa13.88□□□□□ -0.19
TNFRSF1A-207ENST00000535958 MYLPFQ96A32 169 aa13.88□□□□□ -0.19
TNFRSF1A-207ENST00000535958 PCIF1Q9H4Z3 704 aa13.88□□□□□ -0.19
TNFRSF1A-207ENST00000535958 OLFML3Q9NRN5 406 aa13.88□□□□□ -0.19
TNFRSF1A-207ENST00000535958 CDH9Q9ULB4 789 aa13.88□□□□□ -0.19
TNFRSF1A-207ENST00000535958 ARHGAP26Q9UNA1 814 aa13.88□□□□□ -0.19
TNFRSF1A-207ENST00000535958 EML5Q05BV3 1969 aa13.88□□□□□ -0.19
TNFRSF1A-207ENST00000535958 C2orf78A6NCI8 922 aa13.87□□□□□ -0.19
TNFRSF1A-207ENST00000535958 MYMKA6NI61 221 aa13.87□□□□□ -0.19
TNFRSF1A-207ENST00000535958 C4orf47A7E2U8 309 aa13.87□□□□□ -0.19
TNFRSF1A-207ENST00000535958 SLC9A3R1O14745 358 aaPredicted RBP13.87□□□□□ -0.19
TNFRSF1A-207ENST00000535958 TM4SF5O14894 197 aa13.87□□□□□ -0.19
TNFRSF1A-207ENST00000535958 TRIM66O15016 1216 aa13.87□□□□□ -0.19
TNFRSF1A-207ENST00000535958 KIAA0391O15091 583 aaKnown RBP13.87□□□□□ -0.19
TNFRSF1A-207ENST00000535958 ABL1P00519 1130 aa13.87□□□□□ -0.19
TNFRSF1A-207ENST00000535958 PFKLP17858 780 aa13.87□□□□□ -0.19
TNFRSF1A-207ENST00000535958 PDCP20941 246 aa13.87□□□□□ -0.19
TNFRSF1A-207ENST00000535958 MAGEA11P43364 429 aa13.87□□□□□ -0.19
TNFRSF1A-207ENST00000535958 DHPSP49366 369 aaPredicted RBP13.87□□□□□ -0.19
TNFRSF1A-207ENST00000535958 KCNA1Q09470 495 aa13.87□□□□□ -0.19
TNFRSF1A-207ENST00000535958 ZNF252P-AS1Q0IIN9 211 aa13.87□□□□□ -0.19
TNFRSF1A-207ENST00000535958 DENND5BQ6ZUT9 1274 aa13.87□□□□□ -0.19
TNFRSF1A-207ENST00000535958 DPH6Q7L8W6 267 aa13.87□□□□□ -0.19
TNFRSF1A-207ENST00000535958 HPDLQ96IR7 371 aa13.87□□□□□ -0.19
TNFRSF1A-207ENST00000535958 SLC22A12Q96S37 553 aa13.87□□□□□ -0.19
TNFRSF1A-207ENST00000535958 MMS19Q96T76 1030 aa13.87□□□□□ -0.19
TNFRSF1A-207ENST00000535958 CBWD1Q9BRT8 395 aa13.87□□□□□ -0.19
TNFRSF1A-207ENST00000535958 PDE11AQ9HCR9 933 aa13.87□□□□□ -0.19
TNFRSF1A-207ENST00000535958 TMEM9BQ9NQ34 198 aa13.87□□□□□ -0.19
TNFRSF1A-207ENST00000535958 PANK4Q9NVE7 773 aa13.87□□□□□ -0.19
TNFRSF1A-207ENST00000535958 BCCIPQ9P287 314 aaKnown RBP eCLIP13.87□□□□□ -0.19
TNFRSF1A-207ENST00000535958 INVSQ9Y283 1065 aa13.87□□□□□ -0.19
TNFRSF1A-207ENST00000535958 HELZP42694 1942 aaKnown RBP13.86□□□□□ -0.19
TNFRSF1A-207ENST00000535958 PRPF6O94906 941 aaKnown RBP13.86□□□□□ -0.19
TNFRSF1A-207ENST00000535958 TCF3P15923 654 aa13.86□□□□□ -0.19
TNFRSF1A-207ENST00000535958 BDNFP23560 247 aa13.86□□□□□ -0.19
TNFRSF1A-207ENST00000535958 WNT7BP56706 349 aa13.86□□□□□ -0.19
TNFRSF1A-207ENST00000535958 CEBPZQ03701 1054 aaKnown RBP13.86□□□□□ -0.19
TNFRSF1A-207ENST00000535958 FOXC1Q12948 553 aa13.86□□□□□ -0.19
TNFRSF1A-207ENST00000535958 CCDC142Q17RM4 750 aa13.86□□□□□ -0.19
TNFRSF1A-207ENST00000535958 SOWAHAQ2M3V2 549 aa13.86□□□□□ -0.19
TNFRSF1A-207ENST00000535958 PMS2CLQ68D20 193 aa13.86□□□□□ -0.19
TNFRSF1A-207ENST00000535958 HS2ST1Q7LGA3 356 aa13.86□□□□□ -0.19
TNFRSF1A-207ENST00000535958 CCDC65Q8IXS2 484 aa13.86□□□□□ -0.19
TNFRSF1A-207ENST00000535958 SPATA17Q96L03 361 aa13.86□□□□□ -0.19
TNFRSF1A-207ENST00000535958 CNOT6LQ96LI5 555 aaKnown RBP13.86□□□□□ -0.19
TNFRSF1A-207ENST00000535958 CEP295NLQ96MC4 621 aa13.86□□□□□ -0.19
TNFRSF1A-207ENST00000535958 PKMYT1Q99640 499 aa13.86□□□□□ -0.19
TNFRSF1A-207ENST00000535958 SNX25Q9H3E2 840 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms