RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 NDRG2Q9UN36 371 aaKnown RBP12.67□□□□□ -0.38
KNTC1-208ENST00000535410 MTF2Q9Y483 593 aaPredicted RBP12.67□□□□□ -0.38
KNTC1-208ENST00000535410 PTPRZ1P23471 2315 aaPredicted RBP12.66□□□□□ -0.38
KNTC1-208ENST00000535410 LRRIQ3A6PVS8 624 aaPredicted RBP12.66□□□□□ -0.38
KNTC1-208ENST00000535410 STX10O60499 249 aa12.66□□□□□ -0.38
KNTC1-208ENST00000535410 C4BPAP04003 597 aaKnown RBP12.66□□□□□ -0.38
KNTC1-208ENST00000535410 BDNFP23560 247 aa12.66□□□□□ -0.38
KNTC1-208ENST00000535410 NR2F2P24468 414 aa12.66□□□□□ -0.38
KNTC1-208ENST00000535410 TARSP26639 723 aaKnown RBP12.66□□□□□ -0.38
KNTC1-208ENST00000535410 PSMC2P35998 433 aaKnown RBP12.66□□□□□ -0.38
KNTC1-208ENST00000535410 VAMP7P51809 220 aa12.66□□□□□ -0.38
KNTC1-208ENST00000535410 CDR1P51861 262 aa12.66□□□□□ -0.38
KNTC1-208ENST00000535410 PSMC1P62191 440 aaKnown RBP12.66□□□□□ -0.38
KNTC1-208ENST00000535410 PDGFRLQ15198 375 aa12.66□□□□□ -0.38
KNTC1-208ENST00000535410 EDRF1Q3B7T1 1238 aa12.66□□□□□ -0.38
KNTC1-208ENST00000535410 ITPRIPL2Q3MIP1 535 aa12.66□□□□□ -0.38
KNTC1-208ENST00000535410 DGKKQ5KSL6 1271 aa12.66□□□□□ -0.38
KNTC1-208ENST00000535410 TDRD10Q5VZ19 366 aaKnown RBP12.66□□□□□ -0.38
KNTC1-208ENST00000535410 TXNDC8Q6A555 127 aa12.66□□□□□ -0.38
KNTC1-208ENST00000535410 DENND5BQ6ZUT9 1274 aa12.66□□□□□ -0.38
KNTC1-208ENST00000535410 FRMD5Q7Z6J6 570 aa12.66□□□□□ -0.38
KNTC1-208ENST00000535410 SYNPOQ8N3V7 929 aa12.66□□□□□ -0.38
KNTC1-208ENST00000535410 B3GALNT2Q8NCR0 500 aa12.66□□□□□ -0.38
KNTC1-208ENST00000535410 ATRIPQ8WXE1 791 aa12.66□□□□□ -0.38
KNTC1-208ENST00000535410 MYLPFQ96A32 169 aa12.66□□□□□ -0.38
KNTC1-208ENST00000535410 PCED1BQ96HM7 432 aa12.66□□□□□ -0.38
KNTC1-208ENST00000535410 FAM84AQ96KN4 292 aa12.66□□□□□ -0.38
KNTC1-208ENST00000535410 MRPL45Q9BRJ2 306 aaKnown RBP12.66□□□□□ -0.38
KNTC1-208ENST00000535410 MKNK1Q9BUB5 465 aa12.66□□□□□ -0.38
KNTC1-208ENST00000535410 XYLT2Q9H1B5 865 aa12.66□□□□□ -0.38
KNTC1-208ENST00000535410 LMAN1LQ9HAT1 526 aa12.66□□□□□ -0.38
KNTC1-208ENST00000535410 CRTAC1Q9NQ79 661 aa12.66□□□□□ -0.38
KNTC1-208ENST00000535410 TRPM5Q9NZQ8 1165 aa12.66□□□□□ -0.38
KNTC1-208ENST00000535410 F5P12259 2224 aa12.66□□□□□ -0.38
KNTC1-208ENST00000535410 WDFY4Q6ZS81 3184 aa12.66□□□□□ -0.38
KNTC1-208ENST00000535410 ARNTLO00327 626 aa12.65□□□□□ -0.38
KNTC1-208ENST00000535410 NRG2O14511 850 aaPredicted RBP12.65□□□□□ -0.38
KNTC1-208ENST00000535410 CETN3O15182 167 aa12.65□□□□□ -0.38
KNTC1-208ENST00000535410 ATP2C2O75185 946 aa12.65□□□□□ -0.38
KNTC1-208ENST00000535410 LMNAP02545 664 aaKnown RBP12.65□□□□□ -0.38
KNTC1-208ENST00000535410 CKMP06732 381 aa12.65□□□□□ -0.38
KNTC1-208ENST00000535410 HDCP19113 662 aa12.65□□□□□ -0.38
KNTC1-208ENST00000535410 CCNE1P24864 410 aa12.65□□□□□ -0.38
KNTC1-208ENST00000535410 GTF2H1P32780 548 aa12.65□□□□□ -0.38
KNTC1-208ENST00000535410 CASP4P49662 377 aa12.65□□□□□ -0.38
KNTC1-208ENST00000535410 GPR15P49685 360 aa12.65□□□□□ -0.38
KNTC1-208ENST00000535410 CCR3P51677 355 aa12.65□□□□□ -0.38
KNTC1-208ENST00000535410 NOP14P78316 857 aaKnown RBP12.65□□□□□ -0.38
KNTC1-208ENST00000535410 FAM160A1Q05DH4 1040 aa12.65□□□□□ -0.38
KNTC1-208ENST00000535410 NR1H3Q13133 447 aa12.65□□□□□ -0.38
KNTC1-208ENST00000535410 ZACNQ401N2 412 aa12.65□□□□□ -0.38
KNTC1-208ENST00000535410 MDH1BQ5I0G3 518 aa12.65□□□□□ -0.38
KNTC1-208ENST00000535410 SDHAF4Q5VUM1 108 aa12.65□□□□□ -0.38
KNTC1-208ENST00000535410 SV2AQ7L0J3 742 aa12.65□□□□□ -0.38
KNTC1-208ENST00000535410 TMEM150AQ86TG1 271 aa12.65□□□□□ -0.38
KNTC1-208ENST00000535410 UNC93AQ86WB7 457 aa12.65□□□□□ -0.38
KNTC1-208ENST00000535410 FAM186BQ8IYM0 893 aa12.65□□□□□ -0.38
KNTC1-208ENST00000535410 KIAA1958Q8N8K9 716 aa12.65□□□□□ -0.38
KNTC1-208ENST00000535410 SLITRK1Q96PX8 696 aa12.65□□□□□ -0.38
KNTC1-208ENST00000535410 TSG101Q99816 390 aa12.65□□□□□ -0.38
KNTC1-208ENST00000535410 CHRDQ9H2X0 955 aa12.65□□□□□ -0.38
KNTC1-208ENST00000535410 GDPD2Q9HCC8 539 aa12.65□□□□□ -0.38
KNTC1-208ENST00000535410 GKN1Q9NS71 199 aa12.65□□□□□ -0.38
KNTC1-208ENST00000535410 PCDHGA2Q9Y5H1 932 aa12.65□□□□□ -0.38
KNTC1-208ENST00000535410 RIF1Q5UIP0 2472 aaKnown RBP12.65□□□□□ -0.38
KNTC1-208ENST00000535410 TCHHQ07283 1943 aa12.64□□□□□ -0.39
KNTC1-208ENST00000535410 PRR23AA6NEV1 266 aa12.64□□□□□ -0.39
KNTC1-208ENST00000535410 SPECC1L-ADORA2AF8WAN1 911 aa12.64□□□□□ -0.39
KNTC1-208ENST00000535410 KINO60870 393 aaKnown RBP12.64□□□□□ -0.39
KNTC1-208ENST00000535410 LRRN2O75325 713 aa12.64□□□□□ -0.39
KNTC1-208ENST00000535410 RTN3O95197 1032 aaPredicted RBP12.64□□□□□ -0.39
KNTC1-208ENST00000535410 PRAMEF12O95522 483 aa12.64□□□□□ -0.39
KNTC1-208ENST00000535410 PPP1R2P41236 205 aa12.64□□□□□ -0.39
KNTC1-208ENST00000535410 PIK3CAP42336 1068 aa12.64□□□□□ -0.39
KNTC1-208ENST00000535410 CSTF1Q05048 431 aaKnown RBP12.64□□□□□ -0.39
KNTC1-208ENST00000535410 STIM1Q13586 685 aa12.64□□□□□ -0.39
KNTC1-208ENST00000535410 SCARA3Q6AZY7 606 aa12.64□□□□□ -0.39
KNTC1-208ENST00000535410 GPIHBP1Q8IV16 184 aa12.64□□□□□ -0.39
KNTC1-208ENST00000535410 FMR1NBQ8N0W7 255 aaPredicted RBP12.64□□□□□ -0.39
KNTC1-208ENST00000535410 TTC39CQ8N584 583 aa12.64□□□□□ -0.39
KNTC1-208ENST00000535410 STKLD1Q8NE28 680 aa12.64□□□□□ -0.39
KNTC1-208ENST00000535410 PDZD8Q8NEN9 1154 aa12.64□□□□□ -0.39
KNTC1-208ENST00000535410 CCDC26Q8TAB7 109 aa12.64□□□□□ -0.39
KNTC1-208ENST00000535410 USP13Q92995 863 aaPredicted RBP12.64□□□□□ -0.39
KNTC1-208ENST00000535410 RSPRY1Q96DX4 576 aa12.64□□□□□ -0.39
KNTC1-208ENST00000535410 FAXDC2Q96IV6 333 aa12.64□□□□□ -0.39
KNTC1-208ENST00000535410 TIGD1Q96MW7 591 aa12.64□□□□□ -0.39
KNTC1-208ENST00000535410 MED10Q9BTT4 135 aa12.64□□□□□ -0.39
KNTC1-208ENST00000535410 TTLL2Q9BWV7 592 aa12.64□□□□□ -0.39
KNTC1-208ENST00000535410 GZF1Q9H116 711 aaPredicted RBP12.64□□□□□ -0.39
KNTC1-208ENST00000535410 GOLPH3LQ9H4A5 285 aa12.64□□□□□ -0.39
KNTC1-208ENST00000535410 CYP3A43Q9HB55 503 aa12.64□□□□□ -0.39
KNTC1-208ENST00000535410 TRPC7Q9HCX4 862 aa12.64□□□□□ -0.39
KNTC1-208ENST00000535410 COMMD8Q9NX08 183 aa12.64□□□□□ -0.39
KNTC1-208ENST00000535410 ZSCAN32Q9NX65 697 aa12.64□□□□□ -0.39
KNTC1-208ENST00000535410 F8VP50 259 aa12.63□□□□□ -0.39
KNTC1-208ENST00000535410 PRR29P0C7W0 189 aa12.63□□□□□ -0.39
KNTC1-208ENST00000535410 EPB41P11171 864 aaKnown RBP12.63□□□□□ -0.39
KNTC1-208ENST00000535410 CTHP32929 405 aa12.63□□□□□ -0.39
KNTC1-208ENST00000535410 CXCL12P48061 93 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms