RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 ZNF252P-AS1Q0IIN9 211 aa21.44■■□□□ 1.02
TNFRSF1A-205ENST00000534885 ZNF268Q14587 947 aaPredicted RBP21.44■■□□□ 1.02
TNFRSF1A-205ENST00000534885 DCAF12L1Q5VU92 463 aa21.44■■□□□ 1.02
TNFRSF1A-205ENST00000534885 TMCO2Q7Z6W1 182 aaPredicted RBP21.44■■□□□ 1.02
TNFRSF1A-205ENST00000534885 OR10T2Q8NGX3 314 aa21.44■■□□□ 1.02
TNFRSF1A-205ENST00000534885 SPATA18Q8TC71 538 aa21.44■■□□□ 1.02
TNFRSF1A-205ENST00000534885 ALG3Q92685 438 aa21.44■■□□□ 1.02
TNFRSF1A-205ENST00000534885 MCRS1Q96EZ8 462 aa21.44■■□□□ 1.02
TNFRSF1A-205ENST00000534885 SLC4A5Q9BY07 1137 aa21.44■■□□□ 1.02
TNFRSF1A-205ENST00000534885 MRPL9Q9BYD2 267 aaKnown RBP21.44■■□□□ 1.02
TNFRSF1A-205ENST00000534885 B3GNT5Q9BYG0 378 aa21.44■■□□□ 1.02
TNFRSF1A-205ENST00000534885 METTL5Q9NRN9 209 aaKnown RBP21.44■■□□□ 1.02
TNFRSF1A-205ENST00000534885 WDR35Q9P2L0 1181 aa21.44■■□□□ 1.02
TNFRSF1A-205ENST00000534885 PCDHB8Q9UN66 801 aa21.44■■□□□ 1.02
TNFRSF1A-205ENST00000534885 COL4A6Q14031 1691 aa21.44■■□□□ 1.02
TNFRSF1A-205ENST00000534885 DYNC1I1O14576 645 aa21.44■■□□□ 1.02
TNFRSF1A-205ENST00000534885 TADA2AO75478 443 aa21.44■■□□□ 1.02
TNFRSF1A-205ENST00000534885 PROSCO94903 275 aa21.44■■□□□ 1.02
TNFRSF1A-205ENST00000534885 ACRP10323 421 aa21.44■■□□□ 1.02
TNFRSF1A-205ENST00000534885 KRT3P12035 628 aa21.44■■□□□ 1.02
TNFRSF1A-205ENST00000534885 TYMPP19971 482 aa21.44■■□□□ 1.02
TNFRSF1A-205ENST00000534885 RFC1P35251 1148 aaPredicted RBP21.44■■□□□ 1.02
TNFRSF1A-205ENST00000534885 FAM183BPQ6ZVS7 135 aa21.44■■□□□ 1.02
TNFRSF1A-205ENST00000534885 JOSD2Q8TAC2 188 aa21.44■■□□□ 1.02
TNFRSF1A-205ENST00000534885 TMEM209Q96SK2 561 aa21.44■■□□□ 1.02
TNFRSF1A-205ENST00000534885 ACBD6Q9BR61 282 aa21.44■■□□□ 1.02
TNFRSF1A-205ENST00000534885 ADAM28Q9UKQ2 775 aa21.44■■□□□ 1.02
TNFRSF1A-205ENST00000534885 ABHD14A-ACY1A0A1B0GW23 586 aa21.43■■□□□ 1.02
TNFRSF1A-205ENST00000534885 SIGLEC16A6NMB1 481 aa21.43■■□□□ 1.02
TNFRSF1A-205ENST00000534885 NT5C1B-RDH14C9J2C7 533 aa21.43■■□□□ 1.02
TNFRSF1A-205ENST00000534885 BEST1O76090 585 aa21.43■■□□□ 1.02
TNFRSF1A-205ENST00000534885 ALDH2P05091 517 aa21.43■■□□□ 1.02
TNFRSF1A-205ENST00000534885 YWHAHQ04917 246 aaPredicted RBP21.43■■□□□ 1.02
TNFRSF1A-205ENST00000534885 TMEM110Q86TL2 294 aa21.43■■□□□ 1.02
TNFRSF1A-205ENST00000534885 LRRC43Q8N309 656 aa21.43■■□□□ 1.02
TNFRSF1A-205ENST00000534885 MYCBPAPQ8TBZ2 947 aa21.43■■□□□ 1.02
TNFRSF1A-205ENST00000534885 STK32AQ8WU08 396 aa21.43■■□□□ 1.02
TNFRSF1A-205ENST00000534885 MED10Q9BTT4 135 aa21.43■■□□□ 1.02
TNFRSF1A-205ENST00000534885 DUSP16Q9BY84 665 aa21.43■■□□□ 1.02
TNFRSF1A-205ENST00000534885 RNF216Q9NWF9 866 aaPredicted RBP21.43■■□□□ 1.02
TNFRSF1A-205ENST00000534885 MARCH5Q9NX47 278 aa21.43■■□□□ 1.02
TNFRSF1A-205ENST00000534885 CTAGE15A4D2H0 777 aa21.43■■□□□ 1.02
TNFRSF1A-205ENST00000534885 DGKIO75912 1065 aa21.43■■□□□ 1.02
TNFRSF1A-205ENST00000534885 CTAGE8P0CG41 777 aa21.43■■□□□ 1.02
TNFRSF1A-205ENST00000534885 DEFB103AP81534 67 aa21.43■■□□□ 1.02
TNFRSF1A-205ENST00000534885 PLCB3Q01970 1234 aa21.43■■□□□ 1.02
TNFRSF1A-205ENST00000534885 TAP1Q03518 808 aa21.43■■□□□ 1.02
TNFRSF1A-205ENST00000534885 FAM102AQ5T9C2 384 aaPredicted RBP21.43■■□□□ 1.02
TNFRSF1A-205ENST00000534885 OR6B2Q6IFH4 312 aa21.43■■□□□ 1.02
TNFRSF1A-205ENST00000534885 CTAGE6Q86UF2 777 aa21.43■■□□□ 1.02
TNFRSF1A-205ENST00000534885 TMEM173Q86WV6 379 aaPredicted RBP21.43■■□□□ 1.02
TNFRSF1A-205ENST00000534885 CTAGE4Q8IX94 777 aa21.43■■□□□ 1.02
TNFRSF1A-205ENST00000534885 TMEM199Q8N511 208 aa21.43■■□□□ 1.02
TNFRSF1A-205ENST00000534885 EMC1Q8N766 993 aa21.43■■□□□ 1.02
TNFRSF1A-205ENST00000534885 KRT82Q9NSB4 513 aa21.43■■□□□ 1.02
TNFRSF1A-205ENST00000534885 ARHGEF37A1IGU5 675 aa21.42■■□□□ 1.02
TNFRSF1A-205ENST00000534885 MIF4GDA9UHW6 222 aaKnown RBP21.42■■□□□ 1.02
TNFRSF1A-205ENST00000534885 NPR3P17342 541 aa21.42■■□□□ 1.02
TNFRSF1A-205ENST00000534885 RNASE9P60153 205 aaKnown RBP21.42■■□□□ 1.02
TNFRSF1A-205ENST00000534885 CKAP4Q07065 602 aaKnown RBP21.42■■□□□ 1.02
TNFRSF1A-205ENST00000534885 INTS6LQ5JSJ4 861 aaKnown RBP21.42■■□□□ 1.02
TNFRSF1A-205ENST00000534885 CCDC181Q5TID7 509 aa21.42■■□□□ 1.02
TNFRSF1A-205ENST00000534885 CLEC20AQ6ZU45 233 aa21.42■■□□□ 1.02
TNFRSF1A-205ENST00000534885 FAM35AQ86V20 835 aa21.42■■□□□ 1.02
TNFRSF1A-205ENST00000534885 SCUBE3Q8IX30 993 aa21.42■■□□□ 1.02
TNFRSF1A-205ENST00000534885 GPR62Q9BZJ7 368 aa21.42■■□□□ 1.02
TNFRSF1A-205ENST00000534885 TMEM30AQ9NV96 361 aa21.42■■□□□ 1.02
TNFRSF1A-205ENST00000534885 IP6K2Q9UHH9 426 aa21.42■■□□□ 1.02
TNFRSF1A-205ENST00000534885 FAN1Q9Y2M0 1017 aa21.42■■□□□ 1.02
TNFRSF1A-205ENST00000534885 PAPSS1O43252 624 aaPredicted RBP21.41■■□□□ 1.02
TNFRSF1A-205ENST00000534885 TRAPPC3O43617 180 aa21.41■■□□□ 1.02
TNFRSF1A-205ENST00000534885 GALTP07902 379 aa21.41■■□□□ 1.02
TNFRSF1A-205ENST00000534885 CTNNA1P35221 906 aaKnown RBP21.41■■□□□ 1.02
TNFRSF1A-205ENST00000534885 PLA2G4AP47712 749 aa21.41■■□□□ 1.02
TNFRSF1A-205ENST00000534885 PEX5P50542 639 aa21.41■■□□□ 1.02
TNFRSF1A-205ENST00000534885 FAM117BQ6P1L5 589 aa21.41■■□□□ 1.02
TNFRSF1A-205ENST00000534885 FAM171BQ6P995 826 aa21.41■■□□□ 1.02
TNFRSF1A-205ENST00000534885 LRRTM3Q86VH5 581 aa21.41■■□□□ 1.02
TNFRSF1A-205ENST00000534885 THEM5Q8N1Q8 247 aa21.41■■□□□ 1.02
TNFRSF1A-205ENST00000534885 TOP1MTQ969P6 601 aa21.41■■□□□ 1.02
TNFRSF1A-205ENST00000534885 PBKQ96KB5 322 aa21.41■■□□□ 1.02
TNFRSF1A-205ENST00000534885 PKMYT1Q99640 499 aa21.41■■□□□ 1.02
TNFRSF1A-205ENST00000534885 RHOBTB2Q9BYZ6 727 aa21.41■■□□□ 1.02
TNFRSF1A-205ENST00000534885 MIS12Q9H081 205 aa21.41■■□□□ 1.02
TNFRSF1A-205ENST00000534885 TMLHEQ9NVH6 421 aa21.41■■□□□ 1.02
TNFRSF1A-205ENST00000534885 EFCAB8A8MWE9 144 aa21.41■■□□□ 1.02
TNFRSF1A-205ENST00000534885 CES2O00748 559 aa21.41■■□□□ 1.02
TNFRSF1A-205ENST00000534885 XPO1O14980 1071 aaKnown RBP21.41■■□□□ 1.02
TNFRSF1A-205ENST00000534885 CEP104O60308 925 aa21.41■■□□□ 1.02
TNFRSF1A-205ENST00000534885 SLC1A1P43005 524 aa21.41■■□□□ 1.02
TNFRSF1A-205ENST00000534885 CACNA2D1P54289 1103 aa21.41■■□□□ 1.02
TNFRSF1A-205ENST00000534885 ERCC6LQ2NKX8 1250 aa21.41■■□□□ 1.02
TNFRSF1A-205ENST00000534885 OLFML1Q6UWY5 402 aa21.41■■□□□ 1.02
TNFRSF1A-205ENST00000534885 PIGZQ86VD9 579 aa21.41■■□□□ 1.02
TNFRSF1A-205ENST00000534885 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.41■■□□□ 1.02
TNFRSF1A-205ENST00000534885 MYLPFQ96A32 169 aa21.41■■□□□ 1.02
TNFRSF1A-205ENST00000534885 USTQ9Y2C2 406 aa21.41■■□□□ 1.02
TNFRSF1A-205ENST00000534885 F8VP50 259 aa21.4■■□□□ 1.02
TNFRSF1A-205ENST00000534885 FAM200BP0CF97 657 aa21.4■■□□□ 1.02
TNFRSF1A-205ENST00000534885 CTNNA2P26232 953 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms