RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 HMGN5P82970 282 aaKnown RBP4.93□□□□□ -1.62
ITGB1-219ENST00000534049 TCF15Q12870 199 aa4.93□□□□□ -1.62
ITGB1-219ENST00000534049 TUBB3Q13509 450 aa4.93□□□□□ -1.62
ITGB1-219ENST00000534049 KIF22Q14807 665 aa4.93□□□□□ -1.62
ITGB1-219ENST00000534049 ZRSR2Q15696 482 aaKnown RBP4.93□□□□□ -1.62
ITGB1-219ENST00000534049 CD300EQ496F6 205 aaPredicted RBP4.93□□□□□ -1.62
ITGB1-219ENST00000534049 TEDDM1Q5T9Z0 273 aa4.93□□□□□ -1.62
ITGB1-219ENST00000534049 SPATA31D1Q6ZQQ2 1576 aa4.93□□□□□ -1.62
ITGB1-219ENST00000534049 PRR18Q8N4B5 295 aa4.93□□□□□ -1.62
ITGB1-219ENST00000534049 CPA6Q8N4T0 437 aa4.93□□□□□ -1.62
ITGB1-219ENST00000534049 TOR1AIP2Q8NFQ8 470 aa4.93□□□□□ -1.62
ITGB1-219ENST00000534049 SLC30A5Q8TAD4 765 aa4.93□□□□□ -1.62
ITGB1-219ENST00000534049 HSPBAP1Q96EW2 488 aa4.93□□□□□ -1.62
ITGB1-219ENST00000534049 PRDM13Q9H4Q3 707 aa4.93□□□□□ -1.62
ITGB1-219ENST00000534049 SUDS3Q9H7L9 328 aaPredicted RBP4.93□□□□□ -1.62
ITGB1-219ENST00000534049 CFDP1Q9UEE9 299 aaPredicted RBP4.93□□□□□ -1.62
ITGB1-219ENST00000534049 DEPDC5O75140 1603 aa4.93□□□□□ -1.62
ITGB1-219ENST00000534049 SALL3Q9BXA9 1300 aa4.93□□□□□ -1.62
ITGB1-219ENST00000534049 POLR1AO95602 1720 aaPredicted RBP4.92□□□□□ -1.62
ITGB1-219ENST00000534049 VWDEQ8N2E2 1590 aa4.92□□□□□ -1.62
ITGB1-219ENST00000534049 MYOM3Q5VTT5 1437 aa4.92□□□□□ -1.62
ITGB1-219ENST00000534049 ZNF785A8K8V0 405 aa4.92□□□□□ -1.62
ITGB1-219ENST00000534049 IPO7O95373 1038 aaKnown RBP4.92□□□□□ -1.62
ITGB1-219ENST00000534049 FTLP02792 175 aaPredicted RBP4.92□□□□□ -1.62
ITGB1-219ENST00000534049 POU2F2P09086 479 aa4.92□□□□□ -1.62
ITGB1-219ENST00000534049 HSPA5P11021 654 aaKnown RBP4.92□□□□□ -1.62
ITGB1-219ENST00000534049 XRCC6P12956 609 aaKnown RBP eCLIP4.92□□□□□ -1.62
ITGB1-219ENST00000534049 ITGALP20701 1170 aa4.92□□□□□ -1.62
ITGB1-219ENST00000534049 GATA3P23771 443 aa4.92□□□□□ -1.62
ITGB1-219ENST00000534049 NDUFV1P49821 464 aa4.92□□□□□ -1.62
ITGB1-219ENST00000534049 HNRNPMP52272 730 aaKnown RBP eCLIP4.92□□□□□ -1.622e-7■■■□□ 17
ITGB1-219ENST00000534049 HABP2Q14520 560 aaPredicted RBP4.92□□□□□ -1.62
ITGB1-219ENST00000534049 CDC37Q16543 378 aaPredicted RBP4.92□□□□□ -1.62
ITGB1-219ENST00000534049 PGS1Q32NB8 556 aa4.92□□□□□ -1.62
ITGB1-219ENST00000534049 BRDTQ58F21 947 aaPredicted RBP4.92□□□□□ -1.62
ITGB1-219ENST00000534049 PLAC9Q5JTB6 97 aa4.92□□□□□ -1.62
ITGB1-219ENST00000534049 AKNAD1Q5T1N1 836 aa4.92□□□□□ -1.62
ITGB1-219ENST00000534049 SASS6Q6UVJ0 657 aa4.92□□□□□ -1.62
ITGB1-219ENST00000534049 ZNF771Q7L3S4 317 aaPredicted RBP4.92□□□□□ -1.62
ITGB1-219ENST00000534049 PTF1AQ7RTS3 328 aa4.92□□□□□ -1.62
ITGB1-219ENST00000534049 FAM90A1Q86YD7 464 aa4.92□□□□□ -1.62
ITGB1-219ENST00000534049 FAM9BQ8IZU0 186 aa4.92□□□□□ -1.62
ITGB1-219ENST00000534049 MTFMTQ96DP5 389 aaKnown RBP4.92□□□□□ -1.62
ITGB1-219ENST00000534049 NELL2Q99435 816 aa4.92□□□□□ -1.62
ITGB1-219ENST00000534049 KLC4Q9NSK0 619 aa4.92□□□□□ -1.62
ITGB1-219ENST00000534049 LMBRD1Q9NUN5 540 aa4.92□□□□□ -1.62
ITGB1-219ENST00000534049 SLC45A2Q9UMX9 530 aa4.92□□□□□ -1.62
ITGB1-219ENST00000534049 LUC7L2Q9Y383 392 aaKnown RBP4.92□□□□□ -1.62
ITGB1-219ENST00000534049 ALKQ9UM73 1620 aa4.92□□□□□ -1.62
ITGB1-219ENST00000534049 ERVK-7P63135 1459 aa4.92□□□□□ -1.62
ITGB1-219ENST00000534049 DHX29Q7Z478 1369 aaKnown RBP4.91□□□□□ -1.62
ITGB1-219ENST00000534049 LOC102724159A0A0B4J2E5 919 aa4.91□□□□□ -1.62
ITGB1-219ENST00000534049 CCDC196A0A1B0GTZ2 297 aa4.91□□□□□ -1.62
ITGB1-219ENST00000534049 E9PLN8 166 aa4.91□□□□□ -1.62
ITGB1-219ENST00000534049 F5H697 171 aa4.91□□□□□ -1.62
ITGB1-219ENST00000534049 MPHOSPH10O00566 681 aaKnown RBP4.91□□□□□ -1.62
ITGB1-219ENST00000534049 URI1O94763 535 aaPredicted RBP4.91□□□□□ -1.62
ITGB1-219ENST00000534049 GPD1P21695 349 aa4.91□□□□□ -1.62
ITGB1-219ENST00000534049 NEK2P51955 445 aa4.91□□□□□ -1.62
ITGB1-219ENST00000534049 ZNF135P52742 658 aaPredicted RBP4.91□□□□□ -1.62
ITGB1-219ENST00000534049 MAPK10P53779 464 aa4.91□□□□□ -1.62
ITGB1-219ENST00000534049 PSMC1P62191 440 aaKnown RBP4.91□□□□□ -1.62
ITGB1-219ENST00000534049 CCDC173Q0VFZ6 552 aa4.91□□□□□ -1.62
ITGB1-219ENST00000534049 PWP2Q15269 919 aaKnown RBP4.91□□□□□ -1.62
ITGB1-219ENST00000534049 FAM153CQ494X1 144 aa4.91□□□□□ -1.62
ITGB1-219ENST00000534049 ZNF362Q5T0B9 420 aaPredicted RBP4.91□□□□□ -1.62
ITGB1-219ENST00000534049 HEATR3Q7Z4Q2 680 aa4.91□□□□□ -1.62
ITGB1-219ENST00000534049 CCDC91Q7Z6B0 441 aa4.91□□□□□ -1.62
ITGB1-219ENST00000534049 PEG10Q86TG7 708 aaKnown RBP4.91□□□□□ -1.62
ITGB1-219ENST00000534049 ARHGEF25Q86VW2 580 aa4.91□□□□□ -1.62
ITGB1-219ENST00000534049 MYCBPAPQ8TBZ2 947 aa4.91□□□□□ -1.62
ITGB1-219ENST00000534049 BRIX1Q8TDN6 353 aaKnown RBP4.91□□□□□ -1.62
ITGB1-219ENST00000534049 NTN5Q8WTR8 489 aaPredicted RBP4.91□□□□□ -1.62
ITGB1-219ENST00000534049 LPIN2Q92539 896 aa4.91□□□□□ -1.62
ITGB1-219ENST00000534049 SARAFQ96BY9 339 aa4.91□□□□□ -1.62
ITGB1-219ENST00000534049 PBKQ96KB5 322 aa4.91□□□□□ -1.62
ITGB1-219ENST00000534049 VKORC1Q9BQB6 163 aa4.91□□□□□ -1.62
ITGB1-219ENST00000534049 ETAA1Q9NY74 926 aa4.91□□□□□ -1.62
ITGB1-219ENST00000534049 ABCF2Q9UG63 623 aa4.91□□□□□ -1.62
ITGB1-219ENST00000534049 PAXBP1Q9Y5B6 917 aa4.91□□□□□ -1.62
ITGB1-219ENST00000534049 PCDHA3Q9Y5H8 950 aa4.91□□□□□ -1.62
ITGB1-219ENST00000534049 MIA2Q96PC5 1412 aa4.9□□□□□ -1.62
ITGB1-219ENST00000534049 CFAP65Q6ZU64 1925 aaKnown RBP4.9□□□□□ -1.62
ITGB1-219ENST00000534049 NLRP1Q9C000 1473 aa4.9□□□□□ -1.62
ITGB1-219ENST00000534049 UQCRHLA0A096LP55 91 aa4.9□□□□□ -1.63
ITGB1-219ENST00000534049 E2F8A0AVK6 867 aa4.9□□□□□ -1.63
ITGB1-219ENST00000534049 MGST3O14880 152 aa4.9□□□□□ -1.63
ITGB1-219ENST00000534049 COQ9O75208 318 aa4.9□□□□□ -1.63
ITGB1-219ENST00000534049 EIF3JO75822 258 aaKnown RBP4.9□□□□□ -1.63
ITGB1-219ENST00000534049 NXPH3O95157 252 aa4.9□□□□□ -1.63
ITGB1-219ENST00000534049 UQCRHP07919 91 aa4.9□□□□□ -1.63
ITGB1-219ENST00000534049 SETSIPP0DME0 302 aa4.9□□□□□ -1.63
ITGB1-219ENST00000534049 CDK4P11802 303 aa4.9□□□□□ -1.63
ITGB1-219ENST00000534049 PPP3CBP16298 524 aa4.9□□□□□ -1.63
ITGB1-219ENST00000534049 LPOP22079 712 aaPredicted RBP4.9□□□□□ -1.63
ITGB1-219ENST00000534049 MC2RQ01718 297 aa4.9□□□□□ -1.63
ITGB1-219ENST00000534049 TXNRD1Q16881 649 aa4.9□□□□□ -1.63
ITGB1-219ENST00000534049 HSP90B2PQ58FF3 399 aa4.9□□□□□ -1.63
ITGB1-219ENST00000534049 EMC10Q5UCC4 262 aa4.9□□□□□ -1.63
ITGB1-219ENST00000534049 ICE2Q659A1 982 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms