RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 IFNAR2P48551 515 aa13.28□□□□□ -0.28
SVIP-205ENST00000533774 LYSMD4Q5XG99 296 aa13.28□□□□□ -0.28
SVIP-205ENST00000533774 JADE1Q6IE81 842 aa13.28□□□□□ -0.28
SVIP-205ENST00000533774 SLCO6A1Q86UG4 719 aa13.28□□□□□ -0.28
SVIP-205ENST00000533774 HDDC3Q8N4P3 179 aa13.28□□□□□ -0.28
SVIP-205ENST00000533774 C4orf32Q8N8J7 132 aa13.28□□□□□ -0.28
SVIP-205ENST00000533774 IL17RCQ8NAC3 791 aa13.28□□□□□ -0.28
SVIP-205ENST00000533774 TXNDC5Q8NBS9 432 aaKnown RBP13.28□□□□□ -0.28
SVIP-205ENST00000533774 SPPL2BQ8TCT7 592 aa13.28□□□□□ -0.28
SVIP-205ENST00000533774 MRPS31Q92665 395 aaKnown RBP13.28□□□□□ -0.28
SVIP-205ENST00000533774 TRPC7Q9HCX4 862 aa13.28□□□□□ -0.28
SVIP-205ENST00000533774 GCNT4Q9P109 453 aa13.28□□□□□ -0.28
SVIP-205ENST00000533774 TMEM131Q92545 1883 aa13.27□□□□□ -0.28
SVIP-205ENST00000533774 KNTC1P50748 2209 aa13.27□□□□□ -0.28
SVIP-205ENST00000533774 ANO9A1A5B4 782 aa13.27□□□□□ -0.29
SVIP-205ENST00000533774 C2orf78A6NCI8 922 aa13.27□□□□□ -0.29
SVIP-205ENST00000533774 JAK2O60674 1132 aa13.27□□□□□ -0.29
SVIP-205ENST00000533774 ADAM23O75077 832 aa13.27□□□□□ -0.29
SVIP-205ENST00000533774 C1QL1O75973 258 aa13.27□□□□□ -0.29
SVIP-205ENST00000533774 KLF8O95600 359 aaPredicted RBP13.27□□□□□ -0.29
SVIP-205ENST00000533774 NFICP08651 508 aa13.27□□□□□ -0.29
SVIP-205ENST00000533774 SERPINF2P08697 491 aa13.27□□□□□ -0.29
SVIP-205ENST00000533774 PPP2R3AQ06190 1150 aa13.27□□□□□ -0.29
SVIP-205ENST00000533774 RAD51AP2Q09MP3 1159 aa13.27□□□□□ -0.29
SVIP-205ENST00000533774 SAFBQ15424 915 aaKnown RBP eCLIP13.27□□□□□ -0.29
SVIP-205ENST00000533774 TRIP6Q15654 476 aaKnown RBP13.27□□□□□ -0.29
SVIP-205ENST00000533774 CCDC142Q17RM4 750 aa13.27□□□□□ -0.29
SVIP-205ENST00000533774 DUOXA1Q1HG43 343 aa13.27□□□□□ -0.29
SVIP-205ENST00000533774 WSCD1Q658N2 575 aa13.27□□□□□ -0.29
SVIP-205ENST00000533774 ZPBP2Q6X784 338 aa13.27□□□□□ -0.29
SVIP-205ENST00000533774 MARCH9Q86YJ5 346 aa13.27□□□□□ -0.29
SVIP-205ENST00000533774 PDCD7Q8N8D1 485 aaKnown RBP13.27□□□□□ -0.29
SVIP-205ENST00000533774 ARL14EPQ8N8R7 260 aaPredicted RBP13.27□□□□□ -0.29
SVIP-205ENST00000533774 GLIS3Q8NEA6 775 aa13.27□□□□□ -0.29
SVIP-205ENST00000533774 SH3RF2Q8TEC5 729 aa13.27□□□□□ -0.29
SVIP-205ENST00000533774 HMGB4Q8WW32 186 aa13.27□□□□□ -0.29
SVIP-205ENST00000533774 WASF1Q92558 559 aa13.27□□□□□ -0.29
SVIP-205ENST00000533774 EXOC4Q96A65 974 aa13.27□□□□□ -0.29
SVIP-205ENST00000533774 PI4K2AQ9BTU6 479 aa13.27□□□□□ -0.29
SVIP-205ENST00000533774 CFAP46Q8IYW2 2715 aa13.27□□□□□ -0.29
SVIP-205ENST00000533774 PP2D1A8MPX8 630 aa13.26□□□□□ -0.29
SVIP-205ENST00000533774 CYB561D2O14569 222 aa13.26□□□□□ -0.29
SVIP-205ENST00000533774 RDXP35241 583 aaKnown RBP13.26□□□□□ -0.29
SVIP-205ENST00000533774 MYH10P35580 1976 aa13.26□□□□□ -0.29
SVIP-205ENST00000533774 MATR3P43243 847 aaKnown RBP eCLIP13.26□□□□□ -0.29
SVIP-205ENST00000533774 MRPS21P82921 87 aaKnown RBP13.26□□□□□ -0.29
SVIP-205ENST00000533774 GFPT1Q06210 699 aaPredicted RBP13.26□□□□□ -0.29
SVIP-205ENST00000533774 NBR1Q14596 966 aa13.26□□□□□ -0.29
SVIP-205ENST00000533774 DDR2Q16832 855 aa13.26□□□□□ -0.29
SVIP-205ENST00000533774 SPDYCQ5MJ68 293 aa13.26□□□□□ -0.29
SVIP-205ENST00000533774 HAUS3Q68CZ6 603 aa13.26□□□□□ -0.29
SVIP-205ENST00000533774 C12orf40Q86WS4 652 aa13.26□□□□□ -0.29
SVIP-205ENST00000533774 NSUN7Q8NE18 718 aaKnown RBP13.26□□□□□ -0.29
SVIP-205ENST00000533774 WHAMMQ8TF30 809 aa13.26□□□□□ -0.29
SVIP-205ENST00000533774 C2orf15Q8WU43 125 aaKnown RBP13.26□□□□□ -0.29
SVIP-205ENST00000533774 SPIRE2Q8WWL2 714 aa13.26□□□□□ -0.29
SVIP-205ENST00000533774 SLC39A7Q92504 469 aa13.26□□□□□ -0.29
SVIP-205ENST00000533774 DRC1Q96MC2 740 aa13.26□□□□□ -0.29
SVIP-205ENST00000533774 SCUBE2Q9NQ36 999 aa13.26□□□□□ -0.29
SVIP-205ENST00000533774 DNAAF2Q9NVR5 837 aaKnown RBP13.26□□□□□ -0.29
SVIP-205ENST00000533774 ARHGAP33O14559 1287 aa13.25□□□□□ -0.29
SVIP-205ENST00000533774 PRPF40AO75400 957 aaKnown RBP13.25□□□□□ -0.29
SVIP-205ENST00000533774 NOL4O94818 638 aa13.25□□□□□ -0.29
SVIP-205ENST00000533774 REC8O95072 547 aa13.25□□□□□ -0.29
SVIP-205ENST00000533774 CYP17A1P05093 508 aa13.25□□□□□ -0.29
SVIP-205ENST00000533774 USP17L7P0C7H9 530 aa13.25□□□□□ -0.29
SVIP-205ENST00000533774 CSH1P0DML2 217 aa13.25□□□□□ -0.29
SVIP-205ENST00000533774 CSH2P0DML3 217 aa13.25□□□□□ -0.29
SVIP-205ENST00000533774 CYP2F1P24903 491 aa13.25□□□□□ -0.29
SVIP-205ENST00000533774 CDC25AP30304 524 aa13.25□□□□□ -0.29
SVIP-205ENST00000533774 KIR2DL1P43626 348 aaPredicted RBP13.25□□□□□ -0.29
SVIP-205ENST00000533774 ATXN3P54252 364 aaPredicted RBP13.25□□□□□ -0.29
SVIP-205ENST00000533774 GUCY1B3Q02153 619 aa13.25□□□□□ -0.29
SVIP-205ENST00000533774 STRN3Q13033 797 aa13.25□□□□□ -0.29
SVIP-205ENST00000533774 NR1H3Q13133 447 aa13.25□□□□□ -0.29
SVIP-205ENST00000533774 SCARA3Q6AZY7 606 aa13.25□□□□□ -0.29
SVIP-205ENST00000533774 SLC41A1Q8IVJ1 513 aa13.25□□□□□ -0.29
SVIP-205ENST00000533774 SPACA7Q96KW9 195 aa13.25□□□□□ -0.29
SVIP-205ENST00000533774 PYM1Q9BRP8 204 aaKnown RBP13.25□□□□□ -0.29
SVIP-205ENST00000533774 MMTAG2Q9BU76 263 aaKnown RBP13.25□□□□□ -0.29
SVIP-205ENST00000533774 TMEM206Q9H813 350 aa13.25□□□□□ -0.29
SVIP-205ENST00000533774 C17orf75Q9HAS0 396 aa13.25□□□□□ -0.29
SVIP-205ENST00000533774 LRWD1Q9UFC0 647 aa13.25□□□□□ -0.29
SVIP-205ENST00000533774 PCDHB5Q9Y5E4 795 aa13.25□□□□□ -0.29
SVIP-205ENST00000533774 PTPRQQ9UMZ3 2332 aa13.25□□□□□ -0.29
SVIP-205ENST00000533774 TRAV19A0A0A6YYK7 116 aa13.24□□□□□ -0.29
SVIP-205ENST00000533774 TCRBV21S2A2A0A5A6 115 aa13.24□□□□□ -0.29
SVIP-205ENST00000533774 EIF4E1BA6NMX2 242 aaKnown RBP13.24□□□□□ -0.29
SVIP-205ENST00000533774 SCAMP3O14828 347 aaKnown RBP13.24□□□□□ -0.29
SVIP-205ENST00000533774 XPOTO43592 962 aaKnown RBP13.24□□□□□ -0.29
SVIP-205ENST00000533774 ALDH1A2O94788 518 aa13.24□□□□□ -0.29
SVIP-205ENST00000533774 CKMP06732 381 aa13.24□□□□□ -0.29
SVIP-205ENST00000533774 PLS3P13797 630 aa13.24□□□□□ -0.29
SVIP-205ENST00000533774 TCF3P15923 654 aa13.24□□□□□ -0.29
SVIP-205ENST00000533774 HOXD12P35452 270 aa13.24□□□□□ -0.29
SVIP-205ENST00000533774 ME3Q16798 604 aa13.24□□□□□ -0.29
SVIP-205ENST00000533774 SLC39A4Q6P5W5 647 aa13.24□□□□□ -0.29
SVIP-205ENST00000533774 IGSF22Q8N9C0 903 aa13.24□□□□□ -0.29
SVIP-205ENST00000533774 CCDC26Q8TAB7 109 aa13.24□□□□□ -0.29
SVIP-205ENST00000533774 CEP76Q8TAP6 659 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms