RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 TP53INP1Q96A56 240 aa8.37□□□□□ -1.07
CASP4-212ENST00000533730 CCDC51Q96ER9 411 aa8.37□□□□□ -1.07
CASP4-212ENST00000533730 ZNF668Q96K58 619 aaPredicted RBP8.37□□□□□ -1.07
CASP4-212ENST00000533730 RAD9AQ99638 391 aa8.37□□□□□ -1.07
CASP4-212ENST00000533730 ADAM2Q99965 735 aa8.37□□□□□ -1.07
CASP4-212ENST00000533730 ELAC1Q9H777 363 aaKnown RBP8.37□□□□□ -1.07
CASP4-212ENST00000533730 IFT22Q9H7X7 185 aa8.37□□□□□ -1.07
CASP4-212ENST00000533730 MAGEF1Q9HAY2 307 aa8.37□□□□□ -1.07
CASP4-212ENST00000533730 CYP4F12Q9HCS2 524 aa8.37□□□□□ -1.07
CASP4-212ENST00000533730 GPRC5CQ9NQ84 441 aa8.37□□□□□ -1.07
CASP4-212ENST00000533730 RGS18Q9NS28 235 aa8.37□□□□□ -1.07
CASP4-212ENST00000533730 BLOC1S4Q9NUP1 217 aa8.37□□□□□ -1.07
CASP4-212ENST00000533730 CRIM1Q9NZV1 1036 aa8.37□□□□□ -1.07
CASP4-212ENST00000533730 CHMP5Q9NZZ3 219 aa8.37□□□□□ -1.07
CASP4-212ENST00000533730 LARSQ9P2J5 1176 aaKnown RBP8.37□□□□□ -1.07
CASP4-212ENST00000533730 PCDHA7Q9UN72 937 aa8.37□□□□□ -1.07
CASP4-212ENST00000533730 INSL6Q9Y581 213 aa8.37□□□□□ -1.07
CASP4-212ENST00000533730 MICAL3Q7RTP6 2002 aa8.36□□□□□ -1.07
CASP4-212ENST00000533730 INO80B-WBP1J3KQ70 363 aa8.36□□□□□ -1.07
CASP4-212ENST00000533730 TBCAO75347 108 aaKnown RBP8.36□□□□□ -1.07
CASP4-212ENST00000533730 KCNH1O95259 989 aa8.36□□□□□ -1.07
CASP4-212ENST00000533730 PLS3P13797 630 aa8.36□□□□□ -1.07
CASP4-212ENST00000533730 CMA1P23946 247 aa8.36□□□□□ -1.07
CASP4-212ENST00000533730 FLT3P36888 993 aa8.36□□□□□ -1.07
CASP4-212ENST00000533730 FXR1P51114 621 aaKnown RBP eCLIP8.36□□□□□ -1.07
CASP4-212ENST00000533730 DEFB103AP81534 67 aa8.36□□□□□ -1.07
CASP4-212ENST00000533730 HLTFQ14527 1009 aaKnown RBP eCLIP8.36□□□□□ -1.07
CASP4-212ENST00000533730 MAPK6Q16659 721 aa8.36□□□□□ -1.07
CASP4-212ENST00000533730 FAM187BQ17R55 369 aa8.36□□□□□ -1.07
CASP4-212ENST00000533730 ANKRD39Q53RE8 183 aa8.36□□□□□ -1.07
CASP4-212ENST00000533730 RESP18Q5W5W9 173 aa8.36□□□□□ -1.07
CASP4-212ENST00000533730 NXNQ6DKJ4 435 aa8.36□□□□□ -1.07
CASP4-212ENST00000533730 TWF2Q6IBS0 349 aaKnown RBP8.36□□□□□ -1.07
CASP4-212ENST00000533730 SHC4Q6S5L8 630 aa8.36□□□□□ -1.07
CASP4-212ENST00000533730 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.36□□□□□ -1.07
CASP4-212ENST00000533730 USP49Q70CQ1 688 aa8.36□□□□□ -1.07
CASP4-212ENST00000533730 APBB1IPQ7Z5R6 666 aaPredicted RBP8.36□□□□□ -1.07
CASP4-212ENST00000533730 SLC17A8Q8NDX2 589 aa8.36□□□□□ -1.07
CASP4-212ENST00000533730 TIFAQ96CG3 184 aa8.36□□□□□ -1.07
CASP4-212ENST00000533730 RCC1LQ96I51 464 aaKnown RBP8.36□□□□□ -1.07
CASP4-212ENST00000533730 MAGEB10Q96LZ2 347 aaPredicted RBP8.36□□□□□ -1.07
CASP4-212ENST00000533730 FANCD2OSQ96PS1 177 aa8.36□□□□□ -1.07
CASP4-212ENST00000533730 NTPCRQ9BSD7 190 aaKnown RBP8.36□□□□□ -1.07
CASP4-212ENST00000533730 GP6Q9HCN6 339 aa8.36□□□□□ -1.07
CASP4-212ENST00000533730 CRTAC1Q9NQ79 661 aa8.36□□□□□ -1.07
CASP4-212ENST00000533730 KMT5AQ9NQR1 393 aa8.36□□□□□ -1.07
CASP4-212ENST00000533730 AGPAT5Q9NUQ2 364 aa8.36□□□□□ -1.07
CASP4-212ENST00000533730 PRMT7Q9NVM4 692 aaPredicted RBP8.36□□□□□ -1.07
CASP4-212ENST00000533730 TMEM161AQ9NX61 479 aa8.36□□□□□ -1.07
CASP4-212ENST00000533730 CGGBP1Q9UFW8 167 aaPredicted RBP8.36□□□□□ -1.07
CASP4-212ENST00000533730 USP25Q9UHP3 1055 aa8.36□□□□□ -1.07
CASP4-212ENST00000533730 PIN4Q9Y237 131 aaKnown RBP8.36□□□□□ -1.07
CASP4-212ENST00000533730 PCDHB7Q9Y5E2 793 aa8.36□□□□□ -1.07
CASP4-212ENST00000533730 COL4A6Q14031 1691 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 A0A0U1RQF3 1178 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 A0A1W2PQ27 194 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 A0A1W2PQ64 194 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 A0A1W2PQD8 194 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 GOLGA6L4A6NEF3 574 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 CCDC169A6NNP5 214 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 TSPAN1O60635 241 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 ZNF623O75123 536 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 EOMESO95936 686 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 LDHAP00338 332 aaKnown RBP8.35□□□□□ -1.07
CASP4-212ENST00000533730 CST3P01034 146 aaPredicted RBP8.35□□□□□ -1.07
CASP4-212ENST00000533730 ITGA4P13612 1032 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 DRD2P14416 443 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 GAP43P17677 238 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 NPTX2P47972 431 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 ZNF131P52739 623 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 GFRA1P56159 465 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 PEX3P56589 373 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 FAM189BP81408 668 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 HTRA4P83105 476 aaPredicted RBP8.35□□□□□ -1.07
CASP4-212ENST00000533730 MBTD1Q05BQ5 628 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 SOX4Q06945 474 aaPredicted RBP8.35□□□□□ -1.07
CASP4-212ENST00000533730 MAPK7Q13164 816 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 DHX8Q14562 1220 aaKnown RBP8.35□□□□□ -1.07
CASP4-212ENST00000533730 UVSSAQ2YD98 709 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 PIK3R6Q5UE93 754 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 GTF2IRD2BQ6EKJ0 949 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 FDX2Q6P4F2 183 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 NOTUMQ6P988 496 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 POMZP3Q6PJE2 187 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 UBE2R2Q712K3 238 aaPredicted RBP8.35□□□□□ -1.07
CASP4-212ENST00000533730 RTN4RL1Q86UN2 441 aaPredicted RBP8.35□□□□□ -1.07
CASP4-212ENST00000533730 GTF2IRD2Q86UP8 949 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 HACE1Q8IYU2 909 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 DAW1Q8N136 415 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 ARHGEF39Q8N4T4 335 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 PDILTQ8N807 584 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 CNNM3Q8NE01 707 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 OR2W6PQ8NHA6 318 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 LINC01599Q8WXQ3 324 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 KCTD13Q8WZ19 329 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 PGBD4Q96DM1 585 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 CCDC34Q96HJ3 373 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 YME1L1Q96TA2 773 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 REEP2Q9BRK0 252 aa8.35□□□□□ -1.07
CASP4-212ENST00000533730 RHOBTB2Q9BYZ6 727 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms