RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 PAEPP09466 180 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 MAP4P27816 1152 aaKnown RBP11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 EEF1DP29692 281 aaKnown RBP11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 GPS1Q13098 491 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 CCDC92Q53HC0 331 aaPredicted RBP11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 DSG4Q86SJ6 1040 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 RAPGEF5Q92565 580 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 ALKBH8Q96BT7 664 aaKnown RBP11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 INPP4AQ96PE3 977 aaPredicted RBP11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 KCNMB3Q9NPA1 279 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 ZC4H2Q9NQZ6 224 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 FBXL21Q9UKT6 434 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 PCDHAC2Q9Y5I4 1007 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 ADGRG1Q9Y653 693 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 NVLO15381 856 aaKnown RBP11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 YWHAQP27348 245 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 AKT1P31749 480 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 MDH1BQ5I0G3 518 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 NAPEPLDQ6IQ20 393 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 RETSATQ6NUM9 610 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 ARMC6Q6NXE6 501 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 UNC93AQ86WB7 457 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 CCDC60Q8IWA6 550 aaPredicted RBP11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 NRBF2Q96F24 287 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 SLC28A3Q9HAS3 691 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 SLC12A8A0AV02 714 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 CYTH3O43739 400 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 TLL1O43897 1013 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 SPAG7O75391 227 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 ASS1P00966 412 aaKnown RBP11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 GRIK3Q13003 919 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 PRAMEF19Q5SWL8 479 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 EGFL8Q99944 293 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 PITPNM3Q9BZ71 974 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 METTL5Q9NRN9 209 aaKnown RBP11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 TRAF3IP3Q9Y228 551 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 DUOX1Q9NRD9 1551 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 COPEO14579 308 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 LYPLA2O95372 231 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 FGBP02675 491 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 GZMAP12544 262 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 EPHB2P29323 1055 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 INPP1P49441 399 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 PCYT1AP49585 367 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 TOB1P50616 345 aaPredicted RBP11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 TWF1Q12792 350 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 ILF2Q12905 390 aaKnown RBP11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 NBPF20Q3BBV1 942 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 CENPPQ6IPU0 288 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 TRIM65Q6PJ69 517 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 NLRP14Q86W24 1093 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 SERPINB11Q96P15 392 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 OSBPL1AQ9BXW6 950 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 ANLNQ9NQW6 1124 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 SUN2Q9UH99 717 aa11.74□□□□□ -0.53
AMBRA1-211ENST00000533727 ATRNL1Q5VV63 1379 aa11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 UBA6A0AVT1 1052 aaPredicted RBP11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 PPP1R3GB7ZBB8 358 aa11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 MEIS2O14770 477 aa11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 ZW10O43264 779 aa11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 RENBPP51606 427 aa11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 USP41Q3LFD5 358 aa11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 SH3D19Q5HYK7 790 aa11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 CTU1Q7Z7A3 348 aaKnown RBP11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 C1orf131Q8NDD1 294 aaKnown RBP11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 SLC30A5Q8TAD4 765 aa11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 DDI1Q8WTU0 396 aa11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 TRAPPC12Q8WVT3 735 aa11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 RUBCNQ92622 972 aa11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 PI4K2AQ9BTU6 479 aa11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 PPCSQ9HAB8 311 aa11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 HPSEQ9Y251 543 aa11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 PKP3Q9Y446 797 aa11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 PLIN4Q96Q06 1357 aa11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 MEFVO15553 781 aaPredicted RBP11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 KCNN4O15554 427 aa11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 HNRNPCP07910 306 aaKnown RBP eCLIP11.73□□□□□ -0.532e-6■■□□□ 14.1
AMBRA1-211ENST00000533727 RGS4P49798 205 aa11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 GEMP55040 296 aa11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 THEMIS2Q5TEJ8 643 aa11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 ZNF467Q7Z7K2 595 aaPredicted RBP11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 ANKRD7Q92527 254 aa11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 OSBPL9Q96SU4 736 aa11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 CYTH2Q99418 400 aa11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 CISHQ9NSE2 258 aa11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 EVA1BQ9NVM1 165 aa11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 RPTORQ8N122 1335 aa11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 MAP3K13O43283 966 aa11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 SPAG6O75602 509 aa11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 RECQL4O94761 1208 aa11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 PYGLP06737 847 aa11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 ACADMP11310 421 aa11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 SLC30A9Q6PML9 568 aa11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 FAM43BQ6ZT52 329 aaPredicted RBP11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.73□□□□□ -0.532e-7■■■■■ 46.7
AMBRA1-211ENST00000533727 DTNBP1Q96EV8 351 aa11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 RNPC3Q96LT9 517 aaKnown RBP11.73□□□□□ -0.53
AMBRA1-211ENST00000533727 FGD4Q96M96 766 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms