RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 SLC8A3P57103 927 aa18.5■□□□□ 0.55
NXF1-216ENST00000533499 RPL10AP62906 217 aaKnown RBP18.5■□□□□ 0.55
NXF1-216ENST00000533499 GOLGA8FQ08AF8 430 aa18.5■□□□□ 0.55
NXF1-216ENST00000533499 GOLGA8DPQ0D2H9 430 aa18.5■□□□□ 0.55
NXF1-216ENST00000533499 PLD1Q13393 1074 aa18.5■□□□□ 0.55
NXF1-216ENST00000533499 VEPH1Q14D04 833 aa18.5■□□□□ 0.55
NXF1-216ENST00000533499 CFAP221Q4G0U5 840 aa18.5■□□□□ 0.55
NXF1-216ENST00000533499 ANKRD54Q6NXT1 300 aa18.5■□□□□ 0.55
NXF1-216ENST00000533499 ELMOD1Q8N336 334 aa18.5■□□□□ 0.55
NXF1-216ENST00000533499 STKLD1Q8NE28 680 aa18.5■□□□□ 0.55
NXF1-216ENST00000533499 BAP1Q92560 729 aa18.5■□□□□ 0.55
NXF1-216ENST00000533499 PABPC5Q96DU9 382 aaKnown RBP18.5■□□□□ 0.55
NXF1-216ENST00000533499 IQCDQ96DY2 449 aa18.5■□□□□ 0.55
NXF1-216ENST00000533499 EDEM3Q9BZQ6 932 aa18.5■□□□□ 0.55
NXF1-216ENST00000533499 SFXN1Q9H9B4 322 aa18.5■□□□□ 0.55
NXF1-216ENST00000533499 ABCB6Q9NP58 842 aa18.5■□□□□ 0.55
NXF1-216ENST00000533499 SEPT11Q9NVA2 429 aaKnown RBP18.5■□□□□ 0.55
NXF1-216ENST00000533499 MAFFQ9ULX9 164 aa18.5■□□□□ 0.55
NXF1-216ENST00000533499 CCDC195A0A1B0GUA6 201 aa18.49■□□□□ 0.55
NXF1-216ENST00000533499 F8VP50 259 aa18.49■□□□□ 0.55
NXF1-216ENST00000533499 H3BQ06 376 aaPredicted RBP18.49■□□□□ 0.55
NXF1-216ENST00000533499 O00370 1275 aa18.49■□□□□ 0.55
NXF1-216ENST00000533499 TBX10O75333 385 aa18.49■□□□□ 0.55
NXF1-216ENST00000533499 MICAL2O94851 1124 aa18.49■□□□□ 0.55
NXF1-216ENST00000533499 GYPCP04921 128 aa18.49■□□□□ 0.55
NXF1-216ENST00000533499 CCDC172P0C7W6 258 aa18.49■□□□□ 0.55
NXF1-216ENST00000533499 CYP11B1P15538 503 aa18.49■□□□□ 0.55
NXF1-216ENST00000533499 FERP16591 822 aa18.49■□□□□ 0.55
NXF1-216ENST00000533499 KCNA5P22460 613 aa18.49■□□□□ 0.55
NXF1-216ENST00000533499 KRT9P35527 623 aa18.49■□□□□ 0.55
NXF1-216ENST00000533499 CACNA2D1P54289 1103 aa18.49■□□□□ 0.55
NXF1-216ENST00000533499 DLX2Q07687 328 aaPredicted RBP18.49■□□□□ 0.55
NXF1-216ENST00000533499 TRIM14Q14142 442 aa18.49■□□□□ 0.55
NXF1-216ENST00000533499 FIGNQ5HY92 759 aa18.49■□□□□ 0.55
NXF1-216ENST00000533499 ARHGAP17Q68EM7 881 aa18.49■□□□□ 0.55
NXF1-216ENST00000533499 VSTM1Q6UX27 236 aa18.49■□□□□ 0.55
NXF1-216ENST00000533499 PAQR9Q6ZVX9 377 aa18.49■□□□□ 0.55
NXF1-216ENST00000533499 PASD1Q8IV76 773 aa18.49■□□□□ 0.55
NXF1-216ENST00000533499 SPC24Q8NBT2 197 aa18.49■□□□□ 0.55
NXF1-216ENST00000533499 HDAC7Q8WUI4 952 aa18.49■□□□□ 0.55
NXF1-216ENST00000533499 ZNF606Q8WXB4 792 aa18.49■□□□□ 0.55
NXF1-216ENST00000533499 KCNK16Q96T55 309 aa18.49■□□□□ 0.55
NXF1-216ENST00000533499 ZSWIM1Q9BR11 485 aa18.49■□□□□ 0.55
NXF1-216ENST00000533499 TTYH3Q9C0H2 523 aa18.49■□□□□ 0.55
NXF1-216ENST00000533499 DMAP1Q9NPF5 467 aaPredicted RBP18.49■□□□□ 0.55
NXF1-216ENST00000533499 CAPN11Q9UMQ6 739 aa18.49■□□□□ 0.55
NXF1-216ENST00000533499 MAGED2Q9UNF1 606 aaPredicted RBP18.49■□□□□ 0.55
NXF1-216ENST00000533499 CDH23Q9H251 3354 aa18.48■□□□□ 0.55
NXF1-216ENST00000533499 A0A1W2PQJ5 194 aa18.48■□□□□ 0.55
NXF1-216ENST00000533499 TRIM66O15016 1216 aa18.48■□□□□ 0.55
NXF1-216ENST00000533499 XYLBO75191 536 aa18.48■□□□□ 0.55
NXF1-216ENST00000533499 MAGEA11P43364 429 aa18.48■□□□□ 0.55
NXF1-216ENST00000533499 ZBED6P86452 979 aa18.48■□□□□ 0.55
NXF1-216ENST00000533499 KCNC3Q14003 757 aa18.48■□□□□ 0.55
NXF1-216ENST00000533499 GSE1Q14687 1217 aa18.48■□□□□ 0.55
NXF1-216ENST00000533499 STILQ15468 1287 aa18.48■□□□□ 0.55
NXF1-216ENST00000533499 CNGA2Q16280 664 aa18.48■□□□□ 0.55
NXF1-216ENST00000533499 TSR1Q2NL82 804 aaKnown RBP18.48■□□□□ 0.55
NXF1-216ENST00000533499 SMG7Q92540 1137 aaKnown RBP18.48■□□□□ 0.55
NXF1-216ENST00000533499 ZNF512Q96ME7 567 aaPredicted RBP18.48■□□□□ 0.55
NXF1-216ENST00000533499 SMOQ99835 787 aa18.48■□□□□ 0.55
NXF1-216ENST00000533499 DUSP16Q9BY84 665 aa18.48■□□□□ 0.55
NXF1-216ENST00000533499 CLEC1BQ9P126 229 aa18.48■□□□□ 0.55
NXF1-216ENST00000533499 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.48■□□□□ 0.55
NXF1-216ENST00000533499 SZT2Q5T011 3432 aa18.48■□□□□ 0.55
NXF1-216ENST00000533499 PTPRDP23468 1912 aa18.47■□□□□ 0.55
NXF1-216ENST00000533499 C1RP00736 705 aa18.47■□□□□ 0.55
NXF1-216ENST00000533499 NPR3P17342 541 aa18.47■□□□□ 0.55
NXF1-216ENST00000533499 ATF6P18850 670 aa18.47■□□□□ 0.55
NXF1-216ENST00000533499 BCAT1P54687 386 aa18.47■□□□□ 0.55
NXF1-216ENST00000533499 ADKP55263 362 aaKnown RBP18.47■□□□□ 0.55
NXF1-216ENST00000533499 CES5AQ6NT32 575 aa18.47■□□□□ 0.55
NXF1-216ENST00000533499 DENND1BQ6P3S1 775 aa18.47■□□□□ 0.55
NXF1-216ENST00000533499 LCLAT1Q6UWP7 414 aa18.47■□□□□ 0.55
NXF1-216ENST00000533499 CLEC20AQ6ZU45 233 aa18.47■□□□□ 0.55
NXF1-216ENST00000533499 NOP9Q86U38 636 aaKnown RBP18.47■□□□□ 0.55
NXF1-216ENST00000533499 TTC30AQ86WT1 665 aa18.47■□□□□ 0.55
NXF1-216ENST00000533499 FMNL3Q8IVF7 1028 aa18.47■□□□□ 0.55
NXF1-216ENST00000533499 ANKRD52Q8NB46 1076 aa18.47■□□□□ 0.55
NXF1-216ENST00000533499 SLC20A1Q8WUM9 679 aa18.47■□□□□ 0.55
NXF1-216ENST00000533499 SECISBP2LQ93073 1101 aaKnown RBP18.47■□□□□ 0.55
NXF1-216ENST00000533499 HLA-CQ95604 372 aa18.47■□□□□ 0.55
NXF1-216ENST00000533499 CORO1BQ9BR76 489 aa18.47■□□□□ 0.55
NXF1-216ENST00000533499 PRKD2Q9BZL6 878 aa18.47■□□□□ 0.55
NXF1-216ENST00000533499 UBE2ZQ9H832 354 aaPredicted RBP18.47■□□□□ 0.55
NXF1-216ENST00000533499 ZDHHC7Q9NXF8 308 aa18.47■□□□□ 0.55
NXF1-216ENST00000533499 HSFX1Q9UBD0 423 aa18.47■□□□□ 0.55
NXF1-216ENST00000533499 MYO6Q9UM54 1294 aa18.47■□□□□ 0.55
NXF1-216ENST00000533499 BRWD1Q9NSI6 2320 aa18.46■□□□□ 0.55
NXF1-216ENST00000533499 BEST1O76090 585 aa18.46■□□□□ 0.55
NXF1-216ENST00000533499 CFHP08603 1231 aa18.46■□□□□ 0.55
NXF1-216ENST00000533499 HNRNPA1P09651 372 aaKnown RBP eCLIP18.46■□□□□ 0.55
NXF1-216ENST00000533499 SKILP12757 684 aa18.46■□□□□ 0.55
NXF1-216ENST00000533499 MYL4P12829 197 aa18.46■□□□□ 0.55
NXF1-216ENST00000533499 HOXB8P17481 243 aaPredicted RBP18.46■□□□□ 0.55
NXF1-216ENST00000533499 LTBRP36941 435 aa18.46■□□□□ 0.55
NXF1-216ENST00000533499 RGS7P49802 495 aa18.46■□□□□ 0.55
NXF1-216ENST00000533499 PDE4CQ08493 712 aa18.46■□□□□ 0.55
NXF1-216ENST00000533499 BST2Q10589 180 aaKnown RBP18.46■□□□□ 0.55
NXF1-216ENST00000533499 MTMR3Q13615 1198 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms