RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 CDHR1Q96JP9 859 aa17.42■□□□□ 0.38
CTSB-228ENST00000533455 CYTH2Q99418 400 aa17.42■□□□□ 0.38
CTSB-228ENST00000533455 TARS2Q9BW92 718 aaKnown RBP17.42■□□□□ 0.38
CTSB-228ENST00000533455 MMADHCQ9H3L0 296 aaPredicted RBP17.42■□□□□ 0.38
CTSB-228ENST00000533455 KCNK13Q9HB14 408 aa17.42■□□□□ 0.38
CTSB-228ENST00000533455 GINM1Q9NU53 330 aa17.42■□□□□ 0.38
CTSB-228ENST00000533455 STRIP2Q9ULQ0 834 aa17.42■□□□□ 0.38
CTSB-228ENST00000533455 AGTPBP1Q9UPW5 1226 aa17.42■□□□□ 0.38
CTSB-228ENST00000533455 A0A0G2JND7 137 aa17.41■□□□□ 0.38
CTSB-228ENST00000533455 IQANK1A0A1B0GTG1 560 aa17.41■□□□□ 0.38
CTSB-228ENST00000533455 SIGLEC16A6NMB1 481 aa17.41■□□□□ 0.38
CTSB-228ENST00000533455 CLGNO14967 610 aa17.41■□□□□ 0.38
CTSB-228ENST00000533455 NVLO15381 856 aaKnown RBP17.41■□□□□ 0.38
CTSB-228ENST00000533455 CST8O60676 142 aa17.41■□□□□ 0.38
CTSB-228ENST00000533455 APBA3O96018 575 aa17.41■□□□□ 0.38
CTSB-228ENST00000533455 ATP4AP20648 1035 aa17.41■□□□□ 0.38
CTSB-228ENST00000533455 WDR49Q8IV35 697 aa17.41■□□□□ 0.38
CTSB-228ENST00000533455 PDIK1LQ8N165 341 aa17.41■□□□□ 0.38
CTSB-228ENST00000533455 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.41■□□□□ 0.385e-6■■□□□ 13.3
CTSB-228ENST00000533455 FNIP1Q8TF40 1166 aa17.41■□□□□ 0.38
CTSB-228ENST00000533455 RSAD2Q8WXG1 361 aa17.41■□□□□ 0.38
CTSB-228ENST00000533455 TMEM143Q96AN5 459 aa17.41■□□□□ 0.38
CTSB-228ENST00000533455 DHX33Q9H6R0 707 aaKnown RBP17.41■□□□□ 0.38
CTSB-228ENST00000533455 TMEM134Q9H6X4 195 aa17.41■□□□□ 0.38
CTSB-228ENST00000533455 FBXO40Q9UH90 709 aa17.41■□□□□ 0.38
CTSB-228ENST00000533455 COL4A5P29400 1685 aa17.41■□□□□ 0.38
CTSB-228ENST00000533455 RLFQ13129 1914 aa17.41■□□□□ 0.38
CTSB-228ENST00000533455 TCRBV7S3A2A0A539 114 aa17.4■□□□□ 0.38
CTSB-228ENST00000533455 DPPA5A6NC42 116 aa17.4■□□□□ 0.38
CTSB-228ENST00000533455 VWA5AO00534 786 aa17.4■□□□□ 0.38
CTSB-228ENST00000533455 PLSCR1O15162 318 aa17.4■□□□□ 0.38
CTSB-228ENST00000533455 LPXNO60711 386 aa17.4■□□□□ 0.38
CTSB-228ENST00000533455 STAM2O75886 525 aa17.4■□□□□ 0.38
CTSB-228ENST00000533455 NPTXRO95502 500 aa17.4■□□□□ 0.38
CTSB-228ENST00000533455 MT-ND3P03897 115 aa17.4■□□□□ 0.38
CTSB-228ENST00000533455 EDN1P05305 212 aa17.4■□□□□ 0.38
CTSB-228ENST00000533455 DYNLT1P63172 113 aa17.4■□□□□ 0.38
CTSB-228ENST00000533455 SATB1Q01826 763 aa17.4■□□□□ 0.38
CTSB-228ENST00000533455 CBLBQ13191 982 aa17.4■□□□□ 0.38
CTSB-228ENST00000533455 BBS9Q3SYG4 887 aa17.4■□□□□ 0.38
CTSB-228ENST00000533455 SCARA3Q6AZY7 606 aa17.4■□□□□ 0.38
CTSB-228ENST00000533455 DSTYKQ6XUX3 929 aa17.4■□□□□ 0.38
CTSB-228ENST00000533455 SH2D5Q6ZV89 423 aa17.4■□□□□ 0.38
CTSB-228ENST00000533455 LRRC6Q86X45 466 aa17.4■□□□□ 0.38
CTSB-228ENST00000533455 NSUN6Q8TEA1 469 aaKnown RBP17.4■□□□□ 0.38
CTSB-228ENST00000533455 FAM136AQ96C01 138 aa17.4■□□□□ 0.38
CTSB-228ENST00000533455 TMEM120AQ9BXJ8 343 aa17.4■□□□□ 0.38
CTSB-228ENST00000533455 NIF3L1Q9GZT8 377 aa17.4■□□□□ 0.38
CTSB-228ENST00000533455 C12orf65Q9H3J6 166 aaKnown RBP17.4■□□□□ 0.38
CTSB-228ENST00000533455 CISHQ9NSE2 258 aa17.4■□□□□ 0.38
CTSB-228ENST00000533455 NMRK1Q9NWW6 199 aa17.4■□□□□ 0.38
CTSB-228ENST00000533455 POLIQ9UNA4 740 aa17.4■□□□□ 0.38
CTSB-228ENST00000533455 RIPK3Q9Y572 518 aa17.4■□□□□ 0.38
CTSB-228ENST00000533455 CFAP69A5D8W1 941 aa17.4■□□□□ 0.38
CTSB-228ENST00000533455 LRRIQ4A6NIV6 560 aa17.4■□□□□ 0.38
CTSB-228ENST00000533455 GOLGA8RI6L899 631 aa17.4■□□□□ 0.38
CTSB-228ENST00000533455 LRCH4O75427 683 aa17.4■□□□□ 0.38
CTSB-228ENST00000533455 KDELR1P24390 212 aa17.4■□□□□ 0.38
CTSB-228ENST00000533455 PSMA2P25787 234 aa17.4■□□□□ 0.38
CTSB-228ENST00000533455 OCRLQ01968 901 aa17.4■□□□□ 0.38
CTSB-228ENST00000533455 KLC1Q07866 573 aa17.4■□□□□ 0.38
CTSB-228ENST00000533455 HADHQ16836 314 aaKnown RBP17.4■□□□□ 0.38
CTSB-228ENST00000533455 MUM1Q2TAK8 710 aa17.4■□□□□ 0.38
CTSB-228ENST00000533455 CYP4A22Q5TCH4 519 aa17.4■□□□□ 0.38
CTSB-228ENST00000533455 IRGCQ6NXR0 463 aa17.4■□□□□ 0.38
CTSB-228ENST00000533455 ARFGAP1Q8N6T3 406 aa17.4■□□□□ 0.38
CTSB-228ENST00000533455 ZNF483Q8TF39 744 aaPredicted RBP17.4■□□□□ 0.38
CTSB-228ENST00000533455 SLC44A1Q8WWI5 657 aa17.4■□□□□ 0.38
CTSB-228ENST00000533455 KLF6Q99612 283 aaPredicted RBP17.4■□□□□ 0.38
CTSB-228ENST00000533455 RPAP3Q9H6T3 665 aaPredicted RBP17.4■□□□□ 0.38
CTSB-228ENST00000533455 CNTN3Q9P232 1028 aa17.4■□□□□ 0.38
CTSB-228ENST00000533455 SAE1Q9UBE0 346 aaPredicted RBP17.4■□□□□ 0.38
CTSB-228ENST00000533455 XPO7Q9UIA9 1087 aaKnown RBP17.4■□□□□ 0.38
CTSB-228ENST00000533455 ZBTB12Q9Y330 459 aaPredicted RBP17.4■□□□□ 0.38
CTSB-228ENST00000533455 GOLGB1Q14789 3259 aaKnown RBP17.39■□□□□ 0.38
CTSB-228ENST00000533455 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.39■□□□□ 0.37
CTSB-228ENST00000533455 KLF11O14901 512 aa17.39■□□□□ 0.37
CTSB-228ENST00000533455 FAM155BO75949 473 aa17.39■□□□□ 0.37
CTSB-228ENST00000533455 CST3P01034 146 aaPredicted RBP17.39■□□□□ 0.37
CTSB-228ENST00000533455 DLDP09622 509 aaKnown RBP17.39■□□□□ 0.37
CTSB-228ENST00000533455 IL1R2P27930 398 aa17.39■□□□□ 0.37
CTSB-228ENST00000533455 SERPINB3P29508 390 aa17.39■□□□□ 0.37
CTSB-228ENST00000533455 PSMC4P43686 418 aa17.39■□□□□ 0.37
CTSB-228ENST00000533455 PTK7Q13308 1070 aa17.39■□□□□ 0.37
CTSB-228ENST00000533455 APBB1IPQ7Z5R6 666 aaPredicted RBP17.39■□□□□ 0.37
CTSB-228ENST00000533455 C10orf88Q9H8K7 445 aa17.39■□□□□ 0.37
CTSB-228ENST00000533455 RGS17Q9UGC6 210 aaPredicted RBP17.39■□□□□ 0.37
CTSB-228ENST00000533455 PHIPQ8WWQ0 1821 aa17.39■□□□□ 0.37
CTSB-228ENST00000533455 SPATA31C2B4DYI2 1134 aa17.38■□□□□ 0.37
CTSB-228ENST00000533455 GYG2O15488 501 aa17.38■□□□□ 0.37
CTSB-228ENST00000533455 SPAG6O75602 509 aa17.38■□□□□ 0.37
CTSB-228ENST00000533455 ATG7O95352 703 aa17.38■□□□□ 0.37
CTSB-228ENST00000533455 OATP04181 439 aa17.38■□□□□ 0.37
CTSB-228ENST00000533455 RFC1P35251 1148 aaPredicted RBP17.38■□□□□ 0.37
CTSB-228ENST00000533455 SP4Q02446 784 aa17.38■□□□□ 0.37
CTSB-228ENST00000533455 RCN1Q15293 331 aa17.38■□□□□ 0.37
CTSB-228ENST00000533455 ACSBG2Q5FVE4 666 aa17.38■□□□□ 0.37
CTSB-228ENST00000533455 UNC45BQ8IWX7 931 aa17.38■□□□□ 0.37
CTSB-228ENST00000533455 TFAP2BQ92481 460 aa17.38■□□□□ 0.37
CTSB-228ENST00000533455 ATG4CQ96DT6 458 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms