RNA–Protein interactions for RNA: ENST00000533451.1

UBASH3B-208, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 2

Gene UBASH3B, Length 1,032 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-208ENST00000533451 CBWD5Q5RIA9 395 aa12.21□□□□□ -0.45
UBASH3B-208ENST00000533451 GPR158Q5T848 1215 aa12.21□□□□□ -0.45
UBASH3B-208ENST00000533451 PARM1Q6UWI2 310 aa12.21□□□□□ -0.45
UBASH3B-208ENST00000533451 TRIM67Q6ZTA4 783 aa12.21□□□□□ -0.45
UBASH3B-208ENST00000533451 LIMS2Q7Z4I7 341 aa12.21□□□□□ -0.45
UBASH3B-208ENST00000533451 GPIHBP1Q8IV16 184 aa12.21□□□□□ -0.45
UBASH3B-208ENST00000533451 ZC3H3Q8IXZ2 948 aaKnown RBP12.21□□□□□ -0.45
UBASH3B-208ENST00000533451 UBALD2Q8IYN6 164 aa12.21□□□□□ -0.45
UBASH3B-208ENST00000533451 ZNF687Q8N1G0 1237 aa12.21□□□□□ -0.45
UBASH3B-208ENST00000533451 TTC16Q8NEE8 873 aa12.21□□□□□ -0.45
UBASH3B-208ENST00000533451 SHKBP1Q8TBC3 707 aa12.21□□□□□ -0.45
UBASH3B-208ENST00000533451 SEMA4DQ92854 862 aa12.21□□□□□ -0.45
UBASH3B-208ENST00000533451 SLC35C1Q96A29 364 aa12.21□□□□□ -0.45
UBASH3B-208ENST00000533451 FUBP3Q96I24 572 aaKnown RBP eCLIP12.21□□□□□ -0.45
UBASH3B-208ENST00000533451 PKMYT1Q99640 499 aa12.21□□□□□ -0.45
UBASH3B-208ENST00000533451 ZNF518BQ9C0D4 1074 aa12.21□□□□□ -0.45
UBASH3B-208ENST00000533451 ELOVL4Q9GZR5 314 aa12.21□□□□□ -0.45
UBASH3B-208ENST00000533451 APOBEC3GQ9HC16 384 aaKnown RBP12.21□□□□□ -0.45
UBASH3B-208ENST00000533451 KRT82Q9NSB4 513 aa12.21□□□□□ -0.45
UBASH3B-208ENST00000533451 RAB20Q9NX57 234 aa12.21□□□□□ -0.45
UBASH3B-208ENST00000533451 GDE1Q9NZC3 331 aa12.21□□□□□ -0.45
UBASH3B-208ENST00000533451 HMGXB4Q9UGU5 601 aa12.21□□□□□ -0.45
UBASH3B-208ENST00000533451 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.21□□□□□ -0.45
UBASH3B-208ENST00000533451 TMEM221A6NGB7 291 aa12.2□□□□□ -0.46
UBASH3B-208ENST00000533451 SLC38A8A6NNN8 435 aa12.2□□□□□ -0.46
UBASH3B-208ENST00000533451 M0R296 226 aa12.2□□□□□ -0.46
UBASH3B-208ENST00000533451 CLDN5O00501 218 aa12.2□□□□□ -0.46
UBASH3B-208ENST00000533451 TRIM66O15016 1216 aa12.2□□□□□ -0.46
UBASH3B-208ENST00000533451 NARSO43776 548 aaKnown RBP12.2□□□□□ -0.46
UBASH3B-208ENST00000533451 CFHP08603 1231 aa12.2□□□□□ -0.46
UBASH3B-208ENST00000533451 FAM163BP0C2L3 166 aa12.2□□□□□ -0.46
UBASH3B-208ENST00000533451 CSH1P0DML2 217 aa12.2□□□□□ -0.46
UBASH3B-208ENST00000533451 CSH2P0DML3 217 aa12.2□□□□□ -0.46
UBASH3B-208ENST00000533451 CCDC130P13994 396 aa12.2□□□□□ -0.46
UBASH3B-208ENST00000533451 ADORA2BP29275 332 aa12.2□□□□□ -0.46
UBASH3B-208ENST00000533451 MAGEA11P43364 429 aa12.2□□□□□ -0.46
UBASH3B-208ENST00000533451 MTIF2P46199 727 aaKnown RBP12.2□□□□□ -0.46
UBASH3B-208ENST00000533451 NLRP12P59046 1061 aa12.2□□□□□ -0.46
UBASH3B-208ENST00000533451 SIGLEC14Q08ET2 396 aa12.2□□□□□ -0.46
UBASH3B-208ENST00000533451 CFAP221Q4G0U5 840 aa12.2□□□□□ -0.46
UBASH3B-208ENST00000533451 ZNF394Q53GI3 561 aa12.2□□□□□ -0.46
UBASH3B-208ENST00000533451 HSP90AA4PQ58FG1 418 aa12.2□□□□□ -0.46
UBASH3B-208ENST00000533451 STXBP5Q5T5C0 1151 aa12.2□□□□□ -0.46
UBASH3B-208ENST00000533451 FAM171BQ6P995 826 aa12.2□□□□□ -0.46
UBASH3B-208ENST00000533451 TMC8Q8IU68 726 aa12.2□□□□□ -0.46
UBASH3B-208ENST00000533451 ZSCAN18Q8TBC5 510 aaPredicted RBP12.2□□□□□ -0.46
UBASH3B-208ENST00000533451 FGF14Q92915 247 aa12.2□□□□□ -0.46
UBASH3B-208ENST00000533451 JAKMIP2Q96AA8 810 aa12.2□□□□□ -0.46
UBASH3B-208ENST00000533451 PBXIP1Q96AQ6 731 aa12.2□□□□□ -0.46
UBASH3B-208ENST00000533451 CNOT6LQ96LI5 555 aaKnown RBP12.2□□□□□ -0.46
UBASH3B-208ENST00000533451 ARID3AQ99856 593 aa12.2□□□□□ -0.46
UBASH3B-208ENST00000533451 B3GNT5Q9BYG0 378 aa12.2□□□□□ -0.46
UBASH3B-208ENST00000533451 TRPC7Q9HCX4 862 aa12.2□□□□□ -0.46
UBASH3B-208ENST00000533451 AVENQ9NQS1 362 aaPredicted RBP12.2□□□□□ -0.46
UBASH3B-208ENST00000533451 NME7Q9Y5B8 376 aa12.2□□□□□ -0.46
UBASH3B-208ENST00000533451 F8VP50 259 aa12.19□□□□□ -0.46
UBASH3B-208ENST00000533451 PES1O00541 588 aaKnown RBP12.19□□□□□ -0.46
UBASH3B-208ENST00000533451 DPYSL4O14531 572 aa12.19□□□□□ -0.46
UBASH3B-208ENST00000533451 ABL1P00519 1130 aa12.19□□□□□ -0.46
UBASH3B-208ENST00000533451 AFPP02771 609 aaKnown RBP12.19□□□□□ -0.46
UBASH3B-208ENST00000533451 EPHA5P54756 1037 aa12.19□□□□□ -0.46
UBASH3B-208ENST00000533451 GRM2Q14416 872 aa12.19□□□□□ -0.46
UBASH3B-208ENST00000533451 FAM78AQ5JUQ0 283 aa12.19□□□□□ -0.46
UBASH3B-208ENST00000533451 SASS6Q6UVJ0 657 aa12.19□□□□□ -0.46
UBASH3B-208ENST00000533451 VSTM1Q6UX27 236 aa12.19□□□□□ -0.46
UBASH3B-208ENST00000533451 GAREM2Q75VX8 874 aa12.19□□□□□ -0.46
UBASH3B-208ENST00000533451 FAM35AQ86V20 835 aa12.19□□□□□ -0.46
UBASH3B-208ENST00000533451 UNC93AQ86WB7 457 aa12.19□□□□□ -0.46
UBASH3B-208ENST00000533451 SLC44A3Q8N4M1 653 aa12.19□□□□□ -0.46
UBASH3B-208ENST00000533451 MRPS31Q92665 395 aaKnown RBP12.19□□□□□ -0.46
UBASH3B-208ENST00000533451 SMARCD2Q92925 531 aa12.19□□□□□ -0.46
UBASH3B-208ENST00000533451 NXPE3Q969Y0 559 aa12.19□□□□□ -0.46
UBASH3B-208ENST00000533451 ZSWIM3Q96MP5 696 aa12.19□□□□□ -0.46
UBASH3B-208ENST00000533451 NT5C1BQ96P26 610 aa12.19□□□□□ -0.46
UBASH3B-208ENST00000533451 RPP25Q9BUL9 199 aaKnown RBP12.19□□□□□ -0.46
UBASH3B-208ENST00000533451 NT5C1AQ9BXI3 368 aa12.19□□□□□ -0.46
UBASH3B-208ENST00000533451 BCO2Q9BYV7 579 aa12.19□□□□□ -0.46
UBASH3B-208ENST00000533451 CYP3A43Q9HB55 503 aa12.19□□□□□ -0.46
UBASH3B-208ENST00000533451 ZFP14Q9HCL3 533 aa12.19□□□□□ -0.46
UBASH3B-208ENST00000533451 UXTQ9UBK9 157 aaPredicted RBP12.19□□□□□ -0.46
UBASH3B-208ENST00000533451 CA14Q9ULX7 337 aa12.19□□□□□ -0.46
UBASH3B-208ENST00000533451 DUSP12Q9UNI6 340 aa12.19□□□□□ -0.46
UBASH3B-208ENST00000533451 OBSL1O75147 1896 aa12.19□□□□□ -0.46
UBASH3B-208ENST00000533451 MYO16Q9Y6X6 1858 aa12.19□□□□□ -0.46
UBASH3B-208ENST00000533451 DENND4CQ5VZ89 1909 aa12.18□□□□□ -0.46
UBASH3B-208ENST00000533451 ANHXE9PGG2 379 aa12.18□□□□□ -0.46
UBASH3B-208ENST00000533451 NRG2O14511 850 aaPredicted RBP12.18□□□□□ -0.46
UBASH3B-208ENST00000533451 AP1G2O75843 785 aa12.18□□□□□ -0.46
UBASH3B-208ENST00000533451 VIPR2P41587 438 aa12.18□□□□□ -0.46
UBASH3B-208ENST00000533451 YWHAEP62258 255 aaKnown RBP12.18□□□□□ -0.46
UBASH3B-208ENST00000533451 CCDC183Q5T5S1 534 aa12.18□□□□□ -0.46
UBASH3B-208ENST00000533451 TANGO2Q6ICL3 276 aa12.18□□□□□ -0.46
UBASH3B-208ENST00000533451 FOXR2Q6PJQ5 311 aa12.18□□□□□ -0.46
UBASH3B-208ENST00000533451 DENND5BQ6ZUT9 1274 aa12.18□□□□□ -0.46
UBASH3B-208ENST00000533451 SPNS2Q8IVW8 549 aa12.18□□□□□ -0.46
UBASH3B-208ENST00000533451 FAM114A1Q8IWE2 563 aa12.18□□□□□ -0.46
UBASH3B-208ENST00000533451 SUGP1Q8IWZ8 645 aaKnown RBP12.18□□□□□ -0.46
UBASH3B-208ENST00000533451 YAF2Q8IY57 180 aa12.18□□□□□ -0.46
UBASH3B-208ENST00000533451 SIX5Q8N196 739 aa12.18□□□□□ -0.46
UBASH3B-208ENST00000533451 PPM1KQ8N3J5 372 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms