RNA–Protein interactions for RNA: ENST00000533415.5

CDC27-210, Transcript of cell division cycle 27, humanhuman

TSL 2

Gene CDC27, Length 2,570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-210ENST00000533415 USP38Q8NB14 1042 aa14.22□□□□□ -0.13
CDC27-210ENST00000533415 PGBD4Q96DM1 585 aa14.22□□□□□ -0.13
CDC27-210ENST00000533415 AVENQ9NQS1 362 aaPredicted RBP14.22□□□□□ -0.13
CDC27-210ENST00000533415 TMEM39AQ9NV64 488 aa14.22□□□□□ -0.13
CDC27-210ENST00000533415 TTC3P53804 2025 aa14.22□□□□□ -0.13
CDC27-210ENST00000533415 SYNJ2BP-COX16A0A087WUM0 186 aa14.22□□□□□ -0.13
CDC27-210ENST00000533415 KRIT1O00522 736 aa14.22□□□□□ -0.13
CDC27-210ENST00000533415 PAPSS1O43252 624 aaPredicted RBP14.22□□□□□ -0.13
CDC27-210ENST00000533415 MTA2O94776 668 aa14.22□□□□□ -0.13
CDC27-210ENST00000533415 PROSCO94903 275 aa14.22□□□□□ -0.13
CDC27-210ENST00000533415 CALB1P05937 261 aa14.22□□□□□ -0.13
CDC27-210ENST00000533415 KRT10P13645 584 aa14.22□□□□□ -0.13
CDC27-210ENST00000533415 PSMA2P25787 234 aa14.22□□□□□ -0.13
CDC27-210ENST00000533415 PNPLA4P41247 253 aa14.22□□□□□ -0.13
CDC27-210ENST00000533415 RAB27AP51159 221 aa14.22□□□□□ -0.13
CDC27-210ENST00000533415 TUSC3Q13454 348 aa14.22□□□□□ -0.13
CDC27-210ENST00000533415 PPP1R15BQ5SWA1 713 aa14.22□□□□□ -0.13
CDC27-210ENST00000533415 SDHAF4Q5VUM1 108 aa14.22□□□□□ -0.13
CDC27-210ENST00000533415 ATG4AQ8WYN0 398 aa14.22□□□□□ -0.13
CDC27-210ENST00000533415 PCED1BQ96HM7 432 aa14.22□□□□□ -0.13
CDC27-210ENST00000533415 LHX5Q9H2C1 402 aa14.22□□□□□ -0.13
CDC27-210ENST00000533415 ZNF446Q9NWS9 450 aa14.22□□□□□ -0.13
CDC27-210ENST00000533415 COX16Q9P0S2 106 aa14.22□□□□□ -0.13
CDC27-210ENST00000533415 MRPL42Q9Y6G3 142 aaKnown RBP14.22□□□□□ -0.13
CDC27-210ENST00000533415 XIRP2A4UGR9 3374 aa14.21□□□□□ -0.13
CDC27-210ENST00000533415 PRLRP16471 622 aa14.21□□□□□ -0.13
CDC27-210ENST00000533415 IL1R2P27930 398 aa14.21□□□□□ -0.13
CDC27-210ENST00000533415 KCNJ1P48048 391 aa14.21□□□□□ -0.13
CDC27-210ENST00000533415 PITX1P78337 314 aaPredicted RBP14.21□□□□□ -0.13
CDC27-210ENST00000533415 CKAP4Q07065 602 aaKnown RBP14.21□□□□□ -0.13
CDC27-210ENST00000533415 GRIK3Q13003 919 aa14.21□□□□□ -0.13
CDC27-210ENST00000533415 SNX1Q13596 522 aa14.21□□□□□ -0.13
CDC27-210ENST00000533415 PKDCCQ504Y2 493 aa14.21□□□□□ -0.13
CDC27-210ENST00000533415 CC2D1AQ6P1N0 951 aaPredicted RBP14.21□□□□□ -0.13
CDC27-210ENST00000533415 CCDC50Q8IVM0 306 aa14.21□□□□□ -0.13
CDC27-210ENST00000533415 HAUS1Q96CS2 278 aa14.21□□□□□ -0.13
CDC27-210ENST00000533415 PGLYRP2Q96PD5 576 aa14.21□□□□□ -0.13
CDC27-210ENST00000533415 SYT15Q9BQS2 421 aa14.21□□□□□ -0.13
CDC27-210ENST00000533415 CRISPLD2Q9H0B8 497 aa14.21□□□□□ -0.13
CDC27-210ENST00000533415 KRT82Q9NSB4 513 aa14.21□□□□□ -0.13
CDC27-210ENST00000533415 GPATCH2LQ9NWQ4 482 aa14.21□□□□□ -0.13
CDC27-210ENST00000533415 HESX1Q9UBX0 185 aa14.21□□□□□ -0.13
CDC27-210ENST00000533415 TBKBP1A7MCY6 615 aa14.21□□□□□ -0.14
CDC27-210ENST00000533415 DCDC2CA8MYV0 355 aa14.21□□□□□ -0.14
CDC27-210ENST00000533415 HADHBP55084 474 aaKnown RBP14.21□□□□□ -0.14
CDC27-210ENST00000533415 ARPP19P56211 112 aa14.21□□□□□ -0.14
CDC27-210ENST00000533415 FBXO46Q6PJ61 603 aaPredicted RBP14.21□□□□□ -0.14
CDC27-210ENST00000533415 PRUNE1Q86TP1 453 aa14.21□□□□□ -0.14
CDC27-210ENST00000533415 DDX42Q86XP3 938 aaKnown RBP eCLIP14.21□□□□□ -0.14
CDC27-210ENST00000533415 LRRN4Q8WUT4 740 aa14.21□□□□□ -0.14
CDC27-210ENST00000533415 SLC35F5Q8WV83 523 aa14.21□□□□□ -0.14
CDC27-210ENST00000533415 RSPH1Q8WYR4 309 aa14.21□□□□□ -0.14
CDC27-210ENST00000533415 TRIM31Q9BZY9 425 aa14.21□□□□□ -0.14
CDC27-210ENST00000533415 AMACRQ9UHK6 382 aa14.21□□□□□ -0.14
CDC27-210ENST00000533415 PCDHB7Q9Y5E2 793 aa14.21□□□□□ -0.14
CDC27-210ENST00000533415 TRIM43BA6NCK2 446 aa14.2□□□□□ -0.14
CDC27-210ENST00000533415 PGRMC1O00264 195 aaKnown RBP14.2□□□□□ -0.14
CDC27-210ENST00000533415 RAD51CO43502 376 aa14.2□□□□□ -0.14
CDC27-210ENST00000533415 SOAT2O75908 522 aa14.2□□□□□ -0.14
CDC27-210ENST00000533415 GLI1P08151 1106 aa14.2□□□□□ -0.14
CDC27-210ENST00000533415 CD48P09326 243 aa14.2□□□□□ -0.14
CDC27-210ENST00000533415 MYBL1P10243 752 aa14.2□□□□□ -0.14
CDC27-210ENST00000533415 CSF2RAP15509 400 aa14.2□□□□□ -0.14
CDC27-210ENST00000533415 WARSP23381 471 aaKnown RBP14.2□□□□□ -0.14
CDC27-210ENST00000533415 ADIGQ0VDE8 80 aa14.2□□□□□ -0.14
CDC27-210ENST00000533415 TAS1R1Q7RTX1 841 aa14.2□□□□□ -0.14
CDC27-210ENST00000533415 LIMS2Q7Z4I7 341 aa14.2□□□□□ -0.14
CDC27-210ENST00000533415 PIGZQ86VD9 579 aa14.2□□□□□ -0.14
CDC27-210ENST00000533415 ABI1Q8IZP0 508 aa14.2□□□□□ -0.14
CDC27-210ENST00000533415 TOP6BLQ8N6T0 577 aa14.2□□□□□ -0.14
CDC27-210ENST00000533415 C3orf20Q8ND61 904 aa14.2□□□□□ -0.14
CDC27-210ENST00000533415 GPR152Q8TDT2 470 aa14.2□□□□□ -0.14
CDC27-210ENST00000533415 BCL7CQ8WUZ0 217 aaPredicted RBP14.2□□□□□ -0.14
CDC27-210ENST00000533415 C1orf54Q8WWF1 131 aa14.2□□□□□ -0.14
CDC27-210ENST00000533415 RAPGEF5Q92565 580 aa14.2□□□□□ -0.14
CDC27-210ENST00000533415 TRIM43Q96BQ3 446 aaPredicted RBP14.2□□□□□ -0.14
CDC27-210ENST00000533415 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.2□□□□□ -0.142e-7■■□□□ 12.1
CDC27-210ENST00000533415 NRDE2Q9H7Z3 1164 aa14.2□□□□□ -0.14
CDC27-210ENST00000533415 BDNFP23560 247 aa14.2□□□□□ -0.14
CDC27-210ENST00000533415 CTNNA1P35221 906 aaKnown RBP14.2□□□□□ -0.14
CDC27-210ENST00000533415 HFE2Q6ZVN8 426 aa14.2□□□□□ -0.14
CDC27-210ENST00000533415 COLGALT2Q8IYK4 626 aa14.2□□□□□ -0.14
CDC27-210ENST00000533415 ADAM32Q8TC27 787 aa14.2□□□□□ -0.14
CDC27-210ENST00000533415 RXFP2Q8WXD0 754 aa14.2□□□□□ -0.14
CDC27-210ENST00000533415 KHSRPQ92945 711 aaKnown RBP eCLIP14.2□□□□□ -0.143e-7■■□□□ 11.9
CDC27-210ENST00000533415 TRIM11Q96F44 468 aa14.2□□□□□ -0.14
CDC27-210ENST00000533415 DDX27Q96GQ7 796 aaKnown RBP14.2□□□□□ -0.14
CDC27-210ENST00000533415 TRAIPQ9BWF2 469 aa14.2□□□□□ -0.14
CDC27-210ENST00000533415 C10orf88Q9H8K7 445 aa14.2□□□□□ -0.14
CDC27-210ENST00000533415 MRPL47Q9HD33 250 aaKnown RBP14.2□□□□□ -0.14
CDC27-210ENST00000533415 TMPRSS4Q9NRS4 437 aa14.2□□□□□ -0.14
CDC27-210ENST00000533415 CALCOCO1Q9P1Z2 691 aa14.2□□□□□ -0.14
CDC27-210ENST00000533415 LRFN2Q9ULH4 789 aa14.2□□□□□ -0.14
CDC27-210ENST00000533415 R3HDM2Q9Y2K5 976 aaKnown RBP14.2□□□□□ -0.14
CDC27-210ENST00000533415 PCDHA3Q9Y5H8 950 aa14.2□□□□□ -0.14
CDC27-210ENST00000533415 CEP290O15078 2479 aa14.19□□□□□ -0.14
CDC27-210ENST00000533415 ATP8B3O60423 1300 aa14.19□□□□□ -0.14
CDC27-210ENST00000533415 GABRDO14764 452 aa14.19□□□□□ -0.14
CDC27-210ENST00000533415 EN2P19622 333 aaPredicted RBP14.19□□□□□ -0.14
CDC27-210ENST00000533415 FAM189BP81408 668 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms