RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 MLKLQ8NB16 471 aa10.48□□□□□ -0.73
NUP98-220ENST00000533346 CCDC150Q8NCX0 1101 aa10.48□□□□□ -0.73
NUP98-220ENST00000533346 ZSCAN18Q8TBC5 510 aaPredicted RBP10.48□□□□□ -0.73
NUP98-220ENST00000533346 GPR152Q8TDT2 470 aa10.48□□□□□ -0.73
NUP98-220ENST00000533346 NELFBQ8WX92 580 aa10.48□□□□□ -0.73
NUP98-220ENST00000533346 B3GNT5Q9BYG0 378 aa10.48□□□□□ -0.73
NUP98-220ENST00000533346 OSBPL6Q9BZF3 934 aa10.48□□□□□ -0.73
NUP98-220ENST00000533346 PLA2G2FQ9BZM2 168 aa10.48□□□□□ -0.73
NUP98-220ENST00000533346 NIF3L1Q9GZT8 377 aa10.48□□□□□ -0.73
NUP98-220ENST00000533346 ATXN3LQ9H3M9 355 aa10.48□□□□□ -0.73
NUP98-220ENST00000533346 SMOC2Q9H3U7 446 aa10.48□□□□□ -0.73
NUP98-220ENST00000533346 CLSTN2Q9H4D0 955 aa10.48□□□□□ -0.73
NUP98-220ENST00000533346 SMYD3Q9H7B4 428 aa10.48□□□□□ -0.73
NUP98-220ENST00000533346 APOBEC3GQ9HC16 384 aaKnown RBP10.48□□□□□ -0.73
NUP98-220ENST00000533346 RWDD2AQ9UIY3 292 aa10.48□□□□□ -0.73
NUP98-220ENST00000533346 NCANO14594 1321 aa10.48□□□□□ -0.73
NUP98-220ENST00000533346 MYH10P35580 1976 aa10.48□□□□□ -0.73
NUP98-220ENST00000533346 KRBA1A5PL33 1030 aa10.47□□□□□ -0.73
NUP98-220ENST00000533346 ARNTLO00327 626 aa10.47□□□□□ -0.73
NUP98-220ENST00000533346 CHADO15335 359 aa10.47□□□□□ -0.73
NUP98-220ENST00000533346 CILPO75339 1184 aa10.47□□□□□ -0.73
NUP98-220ENST00000533346 TADA3O75528 432 aa10.47□□□□□ -0.73
NUP98-220ENST00000533346 FGFR1OPO95684 399 aaKnown RBP10.47□□□□□ -0.73
NUP98-220ENST00000533346 OLFM2O95897 454 aa10.47□□□□□ -0.73
NUP98-220ENST00000533346 GLULP15104 373 aa10.47□□□□□ -0.73
NUP98-220ENST00000533346 TRIM21P19474 475 aaKnown RBP10.47□□□□□ -0.73
NUP98-220ENST00000533346 AOC1P19801 751 aa10.47□□□□□ -0.73
NUP98-220ENST00000533346 BDNFP23560 247 aa10.47□□□□□ -0.73
NUP98-220ENST00000533346 PSMC1P62191 440 aaKnown RBP10.47□□□□□ -0.73
NUP98-220ENST00000533346 CBWD6Q4V339 395 aa10.47□□□□□ -0.73
NUP98-220ENST00000533346 CBWD3Q5JTY5 395 aa10.47□□□□□ -0.73
NUP98-220ENST00000533346 CBWD5Q5RIA9 395 aa10.47□□□□□ -0.73
NUP98-220ENST00000533346 SNX30Q5VWJ9 437 aa10.47□□□□□ -0.73
NUP98-220ENST00000533346 ASTLQ6HA08 431 aaPredicted RBP10.47□□□□□ -0.73
NUP98-220ENST00000533346 C1orf228Q6PIY5 440 aa10.47□□□□□ -0.73
NUP98-220ENST00000533346 VITQ6UXI7 678 aa10.47□□□□□ -0.73
NUP98-220ENST00000533346 RBM43Q6ZSC3 357 aaKnown RBP10.47□□□□□ -0.73
NUP98-220ENST00000533346 DENND5BQ6ZUT9 1274 aa10.47□□□□□ -0.73
NUP98-220ENST00000533346 MON1AQ86VX9 555 aa10.47□□□□□ -0.73
NUP98-220ENST00000533346 ARID3BQ8IVW6 561 aaPredicted RBP10.47□□□□□ -0.73
NUP98-220ENST00000533346 TRIM59Q8IWR1 403 aa10.47□□□□□ -0.73
NUP98-220ENST00000533346 SUGP1Q8IWZ8 645 aaKnown RBP10.47□□□□□ -0.73
NUP98-220ENST00000533346 FUKQ8N0W3 1084 aa10.47□□□□□ -0.73
NUP98-220ENST00000533346 FAM200AQ8TCP9 573 aa10.47□□□□□ -0.73
NUP98-220ENST00000533346 WHAMMQ8TF30 809 aa10.47□□□□□ -0.73
NUP98-220ENST00000533346 GIPC2Q8TF65 315 aa10.47□□□□□ -0.73
NUP98-220ENST00000533346 ING5Q8WYH8 240 aa10.47□□□□□ -0.73
NUP98-220ENST00000533346 OVCA2Q8WZ82 227 aa10.47□□□□□ -0.73
NUP98-220ENST00000533346 SEMA4DQ92854 862 aa10.47□□□□□ -0.73
NUP98-220ENST00000533346 IRF7Q92985 503 aa10.47□□□□□ -0.73
NUP98-220ENST00000533346 MSANTD3Q96H12 275 aa10.47□□□□□ -0.73
NUP98-220ENST00000533346 SHDQ96IW2 340 aa10.47□□□□□ -0.73
NUP98-220ENST00000533346 GBP4Q96PP9 640 aa10.47□□□□□ -0.73
NUP98-220ENST00000533346 PHOX2BQ99453 314 aa10.47□□□□□ -0.73
NUP98-220ENST00000533346 HNRNPABQ99729 332 aaKnown RBP10.47□□□□□ -0.73
NUP98-220ENST00000533346 SLC46A2Q9BY10 475 aa10.47□□□□□ -0.73
NUP98-220ENST00000533346 DNAI2Q9GZS0 605 aa10.47□□□□□ -0.73
NUP98-220ENST00000533346 DPEP3Q9H4B8 488 aa10.47□□□□□ -0.73
NUP98-220ENST00000533346 KIF9Q9HAQ2 790 aa10.47□□□□□ -0.73
NUP98-220ENST00000533346 PNPLA8Q9NP80 782 aa10.47□□□□□ -0.73
NUP98-220ENST00000533346 MIA3Q5JRA6 1907 aa10.46□□□□□ -0.73
NUP98-220ENST00000533346 TULP1O00294 542 aaPredicted RBP10.46□□□□□ -0.73
NUP98-220ENST00000533346 TNFRSF10BO14763 440 aa10.46□□□□□ -0.73
NUP98-220ENST00000533346 GJA1P17302 382 aa10.46□□□□□ -0.73
NUP98-220ENST00000533346 ERCC5P28715 1186 aaPredicted RBP10.46□□□□□ -0.73
NUP98-220ENST00000533346 GRIK1P39086 918 aa10.46□□□□□ -0.73
NUP98-220ENST00000533346 FMO5P49326 533 aa10.46□□□□□ -0.73
NUP98-220ENST00000533346 GPR15P49685 360 aa10.46□□□□□ -0.73
NUP98-220ENST00000533346 PDE6CP51160 858 aa10.46□□□□□ -0.73
NUP98-220ENST00000533346 NDST1P52848 882 aa10.46□□□□□ -0.73
NUP98-220ENST00000533346 CYP27A1Q02318 531 aa10.46□□□□□ -0.73
NUP98-220ENST00000533346 NHLH1Q02575 133 aa10.46□□□□□ -0.73
NUP98-220ENST00000533346 TAF12Q16514 161 aa10.46□□□□□ -0.73
NUP98-220ENST00000533346 CCDC142Q17RM4 750 aa10.46□□□□□ -0.73
NUP98-220ENST00000533346 SLC44A4Q53GD3 710 aa10.46□□□□□ -0.73
NUP98-220ENST00000533346 MDH1BQ5I0G3 518 aa10.46□□□□□ -0.73
NUP98-220ENST00000533346 GPR158Q5T848 1215 aa10.46□□□□□ -0.73
NUP98-220ENST00000533346 CWF19L1Q69YN2 538 aaKnown RBP10.46□□□□□ -0.73
NUP98-220ENST00000533346 ISM2Q6H9L7 571 aa10.46□□□□□ -0.73
NUP98-220ENST00000533346 SPOPLQ6IQ16 392 aa10.46□□□□□ -0.73
NUP98-220ENST00000533346 CMTM8Q8IZV2 173 aa10.46□□□□□ -0.73
NUP98-220ENST00000533346 NUP93Q8N1F7 819 aa10.46□□□□□ -0.73
NUP98-220ENST00000533346 ZNF276Q8N554 614 aa10.46□□□□□ -0.73
NUP98-220ENST00000533346 CELF5Q8N6W0 485 aaKnown RBP10.46□□□□□ -0.73
NUP98-220ENST00000533346 UBR7Q8N806 425 aa10.46□□□□□ -0.73
NUP98-220ENST00000533346 LMO3Q8TAP4 145 aa10.46□□□□□ -0.73
NUP98-220ENST00000533346 MRPS31Q92665 395 aaKnown RBP10.46□□□□□ -0.73
NUP98-220ENST00000533346 EEF2KMTQ96G04 330 aa10.46□□□□□ -0.73
NUP98-220ENST00000533346 SMARCD1Q96GM5 515 aa10.46□□□□□ -0.73
NUP98-220ENST00000533346 GCNAQ96QF7 691 aa10.46□□□□□ -0.73
NUP98-220ENST00000533346 MED15Q96RN5 788 aa10.46□□□□□ -0.73
NUP98-220ENST00000533346 NELL2Q99435 816 aa10.46□□□□□ -0.73
NUP98-220ENST00000533346 TRMT61BQ9BVS5 477 aaKnown RBP10.46□□□□□ -0.73
NUP98-220ENST00000533346 NT5C1AQ9BXI3 368 aa10.46□□□□□ -0.73
NUP98-220ENST00000533346 UBXN6Q9BZV1 441 aa10.46□□□□□ -0.73
NUP98-220ENST00000533346 ARHGEF3Q9NR81 526 aa10.46□□□□□ -0.73
NUP98-220ENST00000533346 GCNT4Q9P109 453 aa10.46□□□□□ -0.73
NUP98-220ENST00000533346 ATP8B3O60423 1300 aa10.46□□□□□ -0.73
NUP98-220ENST00000533346 TICRRQ7Z2Z1 1910 aa10.46□□□□□ -0.74
NUP98-220ENST00000533346 SHISA7A6NL88 538 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms