RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 C4orf50Q6ZRC1 276 aa24.46■■□□□ 1.51
PKP3-210ENST00000533249 ARL14EPQ8N8R7 260 aaPredicted RBP24.46■■□□□ 1.51
PKP3-210ENST00000533249 KBTBD7Q8WVZ9 684 aa24.46■■□□□ 1.51
PKP3-210ENST00000533249 GAB3Q8WWW8 586 aa24.46■■□□□ 1.51
PKP3-210ENST00000533249 MYLPFQ96A32 169 aa24.46■■□□□ 1.51
PKP3-210ENST00000533249 CNTNAP3BQ96NU0 1288 aa24.46■■□□□ 1.51
PKP3-210ENST00000533249 CNTNAP3Q9BZ76 1288 aa24.46■■□□□ 1.51
PKP3-210ENST00000533249 ZSCAN16Q9H4T2 348 aaPredicted RBP24.46■■□□□ 1.51
PKP3-210ENST00000533249 ECT2Q9H8V3 914 aa24.46■■□□□ 1.51
PKP3-210ENST00000533249 MAGEC2Q9UBF1 373 aaPredicted RBP24.46■■□□□ 1.51
PKP3-210ENST00000533249 C2orf78A6NCI8 922 aa24.45■■□□□ 1.5
PKP3-210ENST00000533249 HSP90AA1P07900 732 aaKnown RBP24.45■■□□□ 1.5
PKP3-210ENST00000533249 DRD1P21728 446 aa24.45■■□□□ 1.5
PKP3-210ENST00000533249 MAGEA11P43364 429 aa24.45■■□□□ 1.5
PKP3-210ENST00000533249 NASPP49321 788 aaPredicted RBP24.45■■□□□ 1.5
PKP3-210ENST00000533249 USP4Q13107 963 aa24.45■■□□□ 1.5
PKP3-210ENST00000533249 SURF1Q15526 300 aa24.45■■□□□ 1.5
PKP3-210ENST00000533249 CCDC6Q16204 474 aa24.45■■□□□ 1.5
PKP3-210ENST00000533249 DUOXA2Q1HG44 320 aa24.45■■□□□ 1.5
PKP3-210ENST00000533249 FAM171BQ6P995 826 aa24.45■■□□□ 1.5
PKP3-210ENST00000533249 DPH6Q7L8W6 267 aa24.45■■□□□ 1.5
PKP3-210ENST00000533249 FSIP1Q8NA03 581 aa24.45■■□□□ 1.5
PKP3-210ENST00000533249 OSCP1Q8WVF1 389 aa24.45■■□□□ 1.5
PKP3-210ENST00000533249 INTS4Q96HW7 963 aaKnown RBP24.45■■□□□ 1.5
PKP3-210ENST00000533249 ARRDC1-AS1Q9H2J1 176 aa24.45■■□□□ 1.5
PKP3-210ENST00000533249 TNMDQ9H2S6 317 aa24.45■■□□□ 1.5
PKP3-210ENST00000533249 CRTAC1Q9NQ79 661 aa24.45■■□□□ 1.5
PKP3-210ENST00000533249 HSPBP1Q9NZL4 362 aa24.45■■□□□ 1.5
PKP3-210ENST00000533249 CDH9Q9ULB4 789 aa24.45■■□□□ 1.5
PKP3-210ENST00000533249 ANAPC1Q9H1A4 1944 aa24.45■■□□□ 1.5
PKP3-210ENST00000533249 SPAG17Q6Q759 2223 aa24.45■■□□□ 1.5
PKP3-210ENST00000533249 STX6O43752 255 aa24.44■■□□□ 1.5
PKP3-210ENST00000533249 PDGFRBP09619 1106 aa24.44■■□□□ 1.5
PKP3-210ENST00000533249 BDNFP23560 247 aa24.44■■□□□ 1.5
PKP3-210ENST00000533249 KCNB1Q14721 858 aa24.44■■□□□ 1.5
PKP3-210ENST00000533249 PPM1JQ5JR12 505 aa24.44■■□□□ 1.5
PKP3-210ENST00000533249 CACNA2D4Q7Z3S7 1137 aa24.44■■□□□ 1.5
PKP3-210ENST00000533249 KBTBD6Q86V97 674 aa24.44■■□□□ 1.5
PKP3-210ENST00000533249 SH3RF2Q8TEC5 729 aa24.44■■□□□ 1.5
PKP3-210ENST00000533249 ATP2A3Q93084 1043 aa24.44■■□□□ 1.5
PKP3-210ENST00000533249 EXOC4Q96A65 974 aa24.44■■□□□ 1.5
PKP3-210ENST00000533249 HHIPQ96QV1 700 aa24.44■■□□□ 1.5
PKP3-210ENST00000533249 MMS19Q96T76 1030 aa24.44■■□□□ 1.5
PKP3-210ENST00000533249 LRRC27Q9C0I9 530 aa24.44■■□□□ 1.5
PKP3-210ENST00000533249 GCNT4Q9P109 453 aa24.44■■□□□ 1.5
PKP3-210ENST00000533249 CCDC163A0A0D9SF12 145 aa24.43■■□□□ 1.5
PKP3-210ENST00000533249 HOXD13P35453 343 aa24.43■■□□□ 1.5
PKP3-210ENST00000533249 GRIK1P39086 918 aa24.43■■□□□ 1.5
PKP3-210ENST00000533249 ASIC1P78348 528 aa24.43■■□□□ 1.5
PKP3-210ENST00000533249 CYP27A1Q02318 531 aa24.43■■□□□ 1.5
PKP3-210ENST00000533249 PSMD2Q13200 908 aa24.43■■□□□ 1.5
PKP3-210ENST00000533249 SF3A2Q15428 464 aaKnown RBP24.43■■□□□ 1.5
PKP3-210ENST00000533249 EML3Q32P44 896 aa24.43■■□□□ 1.5
PKP3-210ENST00000533249 AASDHQ4L235 1098 aaPredicted RBP24.43■■□□□ 1.5
PKP3-210ENST00000533249 LIMS2Q7Z4I7 341 aa24.43■■□□□ 1.5
PKP3-210ENST00000533249 WDR49Q8IV35 697 aa24.43■■□□□ 1.5
PKP3-210ENST00000533249 RDH13Q8NBN7 331 aa24.43■■□□□ 1.5
PKP3-210ENST00000533249 LINC00301Q8NCQ3 95 aa24.43■■□□□ 1.5
PKP3-210ENST00000533249 RPLP0P6Q8NHW5 317 aa24.43■■□□□ 1.5
PKP3-210ENST00000533249 CD101Q93033 1021 aa24.43■■□□□ 1.5
PKP3-210ENST00000533249 TRIM9Q9C026 710 aa24.43■■□□□ 1.5
PKP3-210ENST00000533249 TFIP11Q9UBB9 837 aaKnown RBP24.43■■□□□ 1.5
PKP3-210ENST00000533249 GREB1Q4ZG55 1949 aa24.43■■□□□ 1.5
PKP3-210ENST00000533249 TPRP12270 2363 aaKnown RBP24.42■■□□□ 1.5
PKP3-210ENST00000533249 SPTLC2O15270 562 aa24.42■■□□□ 1.5
PKP3-210ENST00000533249 FOXD2O60548 495 aaPredicted RBP24.42■■□□□ 1.5
PKP3-210ENST00000533249 HDCP19113 662 aa24.42■■□□□ 1.5
PKP3-210ENST00000533249 KCNA4P22459 653 aa24.42■■□□□ 1.5
PKP3-210ENST00000533249 WARSP23381 471 aaKnown RBP24.42■■□□□ 1.5
PKP3-210ENST00000533249 MAPRE1Q15691 268 aaKnown RBP24.42■■□□□ 1.5
PKP3-210ENST00000533249 E2F4Q16254 413 aa24.42■■□□□ 1.5
PKP3-210ENST00000533249 FBXO43Q4G163 708 aa24.42■■□□□ 1.5
PKP3-210ENST00000533249 VSTM1Q6UX27 236 aa24.42■■□□□ 1.5
PKP3-210ENST00000533249 TRAPPC11Q7Z392 1133 aa24.42■■□□□ 1.5
PKP3-210ENST00000533249 CAMKK1Q8N5S9 505 aa24.42■■□□□ 1.5
PKP3-210ENST00000533249 DHX58Q96C10 678 aa24.42■■□□□ 1.5
PKP3-210ENST00000533249 KIAA1586Q9HCI6 787 aa24.42■■□□□ 1.5
PKP3-210ENST00000533249 KBTBD4Q9NVX7 518 aa24.42■■□□□ 1.5
PKP3-210ENST00000533249 EML5Q05BV3 1969 aa24.42■■□□□ 1.5
PKP3-210ENST00000533249 DLATP10515 647 aaKnown RBP24.41■■□□□ 1.5
PKP3-210ENST00000533249 ANXA13P27216 316 aa24.41■■□□□ 1.5
PKP3-210ENST00000533249 USP46P62068 366 aa24.41■■□□□ 1.5
PKP3-210ENST00000533249 C12orf50Q8NA57 414 aaPredicted RBP24.41■■□□□ 1.5
PKP3-210ENST00000533249 EZH1Q92800 747 aaPredicted RBP24.41■■□□□ 1.5
PKP3-210ENST00000533249 LOXL4Q96JB6 756 aa24.41■■□□□ 1.5
PKP3-210ENST00000533249 SPATA17Q96L03 361 aa24.41■■□□□ 1.5
PKP3-210ENST00000533249 LINC00597Q9H2U6 94 aa24.41■■□□□ 1.5
PKP3-210ENST00000533249 HELZP42694 1942 aaKnown RBP24.4■■□□□ 1.5
PKP3-210ENST00000533249 EIF3DO15371 548 aaKnown RBP eCLIP24.4■■□□□ 1.5
PKP3-210ENST00000533249 EPN2O95208 641 aa24.4■■□□□ 1.5
PKP3-210ENST00000533249 ADRB1P08588 477 aa24.4■■□□□ 1.5
PKP3-210ENST00000533249 TNNI1P19237 187 aa24.4■■□□□ 1.5
PKP3-210ENST00000533249 RAP1GAPP47736 663 aa24.4■■□□□ 1.5
PKP3-210ENST00000533249 CYP2J2P51589 502 aa24.4■■□□□ 1.5
PKP3-210ENST00000533249 AMPD3Q01432 767 aa24.4■■□□□ 1.5
PKP3-210ENST00000533249 NR1H3Q13133 447 aa24.4■■□□□ 1.5
PKP3-210ENST00000533249 SNRNP35Q16560 246 aaKnown RBP24.4■■□□□ 1.5
PKP3-210ENST00000533249 MDH1BQ5I0G3 518 aa24.4■■□□□ 1.5
PKP3-210ENST00000533249 FAM26FQ5R3K3 315 aa24.4■■□□□ 1.5
PKP3-210ENST00000533249 DENND5BQ6ZUT9 1274 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms