RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 NAGAP17050 411 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 STAT3P40763 770 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 HALP42357 657 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 CCT5P48643 541 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 MASP1P48740 699 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 CENPAP49450 140 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 MECP2P51608 486 aaKnown RBP5.84□□□□□ -1.47
CD44-236ENST00000533222 ZNF75DP51815 510 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 NEK4P51957 841 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 EVCP57679 992 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 BPIFB3P59826 476 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 UBE2HP62256 183 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 AMPD3Q01432 767 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 SEC23AQ15436 765 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 GPR19Q15760 415 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 CRY1Q16526 586 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 GSTA3Q16772 222 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 ANKDD1AQ495B1 522 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 SPECC1Q5M775 1068 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 CPZQ66K79 652 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 PPP4R4Q6NUP7 873 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 ZNF449Q6P9G9 518 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 ANGPTL8Q6UXH0 198 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 SLC30A10Q6XR72 485 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 RASGRP2Q7LDG7 609 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 CATSPER4Q7RTX7 472 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 LDHDQ86WU2 507 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 IGDCC3Q8IVU1 814 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 NKAIN4Q8IVV8 208 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 C17orf53Q8N3J3 647 aaPredicted RBP5.84□□□□□ -1.47
CD44-236ENST00000533222 LSMEM1Q8N8F7 131 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 FBXO15Q8NCQ5 510 aaPredicted RBP5.84□□□□□ -1.47
CD44-236ENST00000533222 MDM1Q8TC05 714 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 ENKURQ8TC29 256 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 BCAS4Q8TDM0 211 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 ATP8B4Q8TF62 1192 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 AFG1LQ8WV93 481 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 DDX1Q92499 740 aaKnown RBP5.84□□□□□ -1.47
CD44-236ENST00000533222 INTS12Q96CB8 462 aaKnown RBP5.84□□□□□ -1.47
CD44-236ENST00000533222 RRP36Q96EU6 259 aaKnown RBP5.84□□□□□ -1.47
CD44-236ENST00000533222 HIC2Q96JB3 615 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 TNIP3Q96KP6 325 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 CCDC138Q96M89 665 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 GPR101Q96P66 508 aaPredicted RBP5.84□□□□□ -1.47
CD44-236ENST00000533222 NUP58Q9BVL2 599 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 INTS2Q9H0H0 1204 aaKnown RBP5.84□□□□□ -1.47
CD44-236ENST00000533222 SMOC1Q9H4F8 434 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 BICC1Q9H694 974 aaKnown RBP5.84□□□□□ -1.47
CD44-236ENST00000533222 NOD2Q9HC29 1040 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 PDE11AQ9HCR9 933 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 EURLQ9NYK6 297 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 EMC3Q9P0I2 261 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 RBPJLQ9UBG7 517 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 DBF4Q9UBU7 674 aaPredicted RBP5.84□□□□□ -1.47
CD44-236ENST00000533222 SRPK3Q9UPE1 567 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 TRIM17Q9Y577 477 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 PCDHA5Q9Y5H7 936 aa5.84□□□□□ -1.47
CD44-236ENST00000533222 ABCC2Q92887 1545 aa5.84□□□□□ -1.48
CD44-236ENST00000533222 NKTRP30414 1462 aaKnown RBP5.83□□□□□ -1.48
CD44-236ENST00000533222 GRIN2AQ12879 1464 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 YTHDC2Q9H6S0 1430 aaKnown RBP5.83□□□□□ -1.48
CD44-236ENST00000533222 KIAA0232Q92628 1395 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 MYO3BQ8WXR4 1341 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 ZNF521Q96K83 1311 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 TEX51A0A1B0GUA7 166 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 C17orf113A0A1B0GUU1 675 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 BTBD11A6QL63 1104 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 SYCE1LA8MT33 242 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 RSPH10B2B2RC85 870 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 GOLGA8RI6L899 631 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 CBX4O00257 560 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 ETV2O00321 342 aaPredicted RBP5.83□□□□□ -1.48
CD44-236ENST00000533222 TRAF5O00463 557 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 RNF113AO15541 343 aaKnown RBP5.83□□□□□ -1.48
CD44-236ENST00000533222 EXTL3O43909 919 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 FARP2O94887 1054 aaPredicted RBP5.83□□□□□ -1.48
CD44-236ENST00000533222 SLITRK3O94933 977 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 ARIH2O95376 493 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 ANP32DO95626 131 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 KRT14P02533 472 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 LMNAP02545 664 aaKnown RBP5.83□□□□□ -1.48
CD44-236ENST00000533222 C8BP07358 591 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 RSPH10BP0C881 870 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 DLATP10515 647 aaKnown RBP5.83□□□□□ -1.48
CD44-236ENST00000533222 ACADSP16219 412 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 PTGS1P23219 599 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 PSMC2P35998 433 aaKnown RBP5.83□□□□□ -1.48
CD44-236ENST00000533222 HSPA9P38646 679 aaKnown RBP5.83□□□□□ -1.48
CD44-236ENST00000533222 ECE1P42892 770 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 CBX5P45973 191 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 LIMS1P48059 325 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 LACTBP83111 547 aaPredicted RBP5.83□□□□□ -1.48
CD44-236ENST00000533222 MAP3K12Q12852 859 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 HLTFQ14527 1009 aaKnown RBP eCLIP5.83□□□□□ -1.48
CD44-236ENST00000533222 CHRNA2Q15822 529 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 SHROOM1Q2M3G4 852 aaPredicted RBP5.83□□□□□ -1.48
CD44-236ENST00000533222 BMP2KLQ5H9B9 411 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 METTL11BQ5VVY1 283 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 TMEM132EQ6IEE7 984 aa5.83□□□□□ -1.48
CD44-236ENST00000533222 UNC5DQ6UXZ4 953 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms