RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 MAB21L3Q8N8X9 362 aa32.29■■■□□ 2.76
SSSCA1-207ENST00000533115 SDCBP2Q9H190 292 aa32.29■■■□□ 2.76
SSSCA1-207ENST00000533115 LTB4R2Q9NPC1 389 aa32.29■■■□□ 2.76
SSSCA1-207ENST00000533115 FAM86C1Q9NVL1 165 aa32.29■■■□□ 2.76
SSSCA1-207ENST00000533115 MTF2Q9Y483 593 aaPredicted RBP32.29■■■□□ 2.76
SSSCA1-207ENST00000533115 PTPRDP23468 1912 aa32.29■■■□□ 2.76
SSSCA1-207ENST00000533115 FAM170BA6NMN3 283 aa32.28■■■□□ 2.76
SSSCA1-207ENST00000533115 ARNTLO00327 626 aa32.28■■■□□ 2.76
SSSCA1-207ENST00000533115 CETN3O15182 167 aa32.28■■■□□ 2.76
SSSCA1-207ENST00000533115 KINO60870 393 aaKnown RBP32.28■■■□□ 2.76
SSSCA1-207ENST00000533115 LRRN2O75325 713 aa32.28■■■□□ 2.76
SSSCA1-207ENST00000533115 ASS1P00966 412 aaKnown RBP32.28■■■□□ 2.76
SSSCA1-207ENST00000533115 ANXA13P27216 316 aa32.28■■■□□ 2.76
SSSCA1-207ENST00000533115 GCLMP48507 274 aa32.28■■■□□ 2.76
SSSCA1-207ENST00000533115 MCCD1P59942 119 aaPredicted RBP32.28■■■□□ 2.76
SSSCA1-207ENST00000533115 PPP3CAQ08209 521 aa32.28■■■□□ 2.76
SSSCA1-207ENST00000533115 TXNDC8Q6A555 127 aa32.28■■■□□ 2.76
SSSCA1-207ENST00000533115 NELL2Q99435 816 aa32.28■■■□□ 2.76
SSSCA1-207ENST00000533115 PHOX2BQ99453 314 aa32.28■■■□□ 2.76
SSSCA1-207ENST00000533115 SMG9Q9H0W8 520 aaKnown RBP32.28■■■□□ 2.76
SSSCA1-207ENST00000533115 COL4A2P08572 1712 aa32.28■■■□□ 2.76
SSSCA1-207ENST00000533115 PIEZO1Q92508 2521 aa32.28■■■□□ 2.76
SSSCA1-207ENST00000533115 OBSL1O75147 1896 aa32.27■■■□□ 2.76
SSSCA1-207ENST00000533115 TRIM66O15016 1216 aa32.27■■■□□ 2.76
SSSCA1-207ENST00000533115 GADD45BO75293 160 aaPredicted RBP32.27■■■□□ 2.76
SSSCA1-207ENST00000533115 TADA3O75528 432 aa32.27■■■□□ 2.76
SSSCA1-207ENST00000533115 GLULP15104 373 aa32.27■■■□□ 2.76
SSSCA1-207ENST00000533115 AVPR1AP37288 418 aa32.27■■■□□ 2.76
SSSCA1-207ENST00000533115 MON1AQ86VX9 555 aa32.27■■■□□ 2.76
SSSCA1-207ENST00000533115 CELF5Q8N6W0 485 aaKnown RBP32.27■■■□□ 2.76
SSSCA1-207ENST00000533115 EEF2KMTQ96G04 330 aa32.27■■■□□ 2.76
SSSCA1-207ENST00000533115 C8orf48Q96LL4 319 aa32.27■■■□□ 2.76
SSSCA1-207ENST00000533115 TSG101Q99816 390 aa32.27■■■□□ 2.76
SSSCA1-207ENST00000533115 MRPS17Q9Y2R5 130 aaKnown RBP32.27■■■□□ 2.76
SSSCA1-207ENST00000533115 TICRRQ7Z2Z1 1910 aa32.27■■■□□ 2.76
SSSCA1-207ENST00000533115 MIA3Q5JRA6 1907 aa32.26■■■□□ 2.76
SSSCA1-207ENST00000533115 SHISA7A6NL88 538 aa32.26■■■□□ 2.75
SSSCA1-207ENST00000533115 MAN2B1O00754 1011 aa32.26■■■□□ 2.75
SSSCA1-207ENST00000533115 ANGPT1Q15389 498 aa32.26■■■□□ 2.75
SSSCA1-207ENST00000533115 ARHGAP29Q52LW3 1261 aa32.26■■■□□ 2.75
SSSCA1-207ENST00000533115 SPOPLQ6IQ16 392 aa32.26■■■□□ 2.75
SSSCA1-207ENST00000533115 ALYREFQ86V81 257 aaKnown RBP32.26■■■□□ 2.75
SSSCA1-207ENST00000533115 ADSSL1Q8N142 457 aa32.26■■■□□ 2.75
SSSCA1-207ENST00000533115 BPIFB1Q8TDL5 484 aa32.26■■■□□ 2.75
SSSCA1-207ENST00000533115 TNIP3Q96KP6 325 aa32.26■■■□□ 2.75
SSSCA1-207ENST00000533115 B3GNT5Q9BYG0 378 aa32.26■■■□□ 2.75
SSSCA1-207ENST00000533115 ELOVL4Q9GZR5 314 aa32.26■■■□□ 2.75
SSSCA1-207ENST00000533115 EPB41P11171 864 aaKnown RBP32.25■■■□□ 2.75
SSSCA1-207ENST00000533115 DENND5BQ6ZUT9 1274 aa32.25■■■□□ 2.75
SSSCA1-207ENST00000533115 CSGALNACT1Q8TDX6 532 aa32.25■■■□□ 2.75
SSSCA1-207ENST00000533115 TAS1R2Q8TE23 839 aa32.25■■■□□ 2.75
SSSCA1-207ENST00000533115 IMPG2Q9BZV3 1241 aa32.25■■■□□ 2.75
SSSCA1-207ENST00000533115 ZNF518BQ9C0D4 1074 aa32.25■■■□□ 2.75
SSSCA1-207ENST00000533115 MMRN2Q9H8L6 949 aa32.25■■■□□ 2.75
SSSCA1-207ENST00000533115 TMEM8AQ9HCN3 771 aa32.25■■■□□ 2.75
SSSCA1-207ENST00000533115 PIAS3Q9Y6X2 628 aa32.25■■■□□ 2.75
SSSCA1-207ENST00000533115 GREB1Q4ZG55 1949 aa32.24■■■□□ 2.75
SSSCA1-207ENST00000533115 F8VP50 259 aa32.24■■■□□ 2.75
SSSCA1-207ENST00000533115 CLDN5O00501 218 aa32.24■■■□□ 2.75
SSSCA1-207ENST00000533115 TARSP26639 723 aaKnown RBP32.24■■■□□ 2.75
SSSCA1-207ENST00000533115 GTF2H1P32780 548 aa32.24■■■□□ 2.75
SSSCA1-207ENST00000533115 ASPAP45381 313 aa32.24■■■□□ 2.75
SSSCA1-207ENST00000533115 ANKRD40Q6AI12 368 aa32.24■■■□□ 2.75
SSSCA1-207ENST00000533115 USP13Q92995 863 aaPredicted RBP32.24■■■□□ 2.75
SSSCA1-207ENST00000533115 BCO2Q9BYV7 579 aa32.24■■■□□ 2.75
SSSCA1-207ENST00000533115 MRE11P49959 708 aa32.23■■■□□ 2.75
SSSCA1-207ENST00000533115 CACNA2D1P54289 1103 aa32.23■■■□□ 2.75
SSSCA1-207ENST00000533115 MLLT6P55198 1093 aaPredicted RBP32.23■■■□□ 2.75
SSSCA1-207ENST00000533115 ZFYVE19Q96K21 471 aa32.23■■■□□ 2.75
SSSCA1-207ENST00000533115 KIF9Q9HAQ2 790 aa32.23■■■□□ 2.75
SSSCA1-207ENST00000533115 UTP3Q9NQZ2 479 aaKnown RBP eCLIP32.23■■■□□ 2.752e-6■■■■■ 119.2
SSSCA1-207ENST00000533115 TDP1Q9NUW8 608 aa32.23■■■□□ 2.75
SSSCA1-207ENST00000533115 TMEM30AQ9NV96 361 aa32.23■■■□□ 2.75
SSSCA1-207ENST00000533115 THG1LQ9NWX6 298 aaKnown RBP32.23■■■□□ 2.75
SSSCA1-207ENST00000533115 EHD2Q9NZN4 543 aa32.23■■■□□ 2.75
SSSCA1-207ENST00000533115 MAN1B1Q9UKM7 699 aa32.23■■■□□ 2.75
SSSCA1-207ENST00000533115 CCL26Q9Y258 94 aa32.23■■■□□ 2.75
SSSCA1-207ENST00000533115 NCAM2O15394 837 aa32.22■■■□□ 2.75
SSSCA1-207ENST00000533115 PMS1P54277 932 aaKnown RBP32.22■■■□□ 2.75
SSSCA1-207ENST00000533115 USP46P62068 366 aa32.22■■■□□ 2.75
SSSCA1-207ENST00000533115 NOP14P78316 857 aaKnown RBP32.22■■■□□ 2.75
SSSCA1-207ENST00000533115 FKBP3Q00688 224 aaKnown RBP32.22■■■□□ 2.75
SSSCA1-207ENST00000533115 PLCB2Q00722 1185 aa32.22■■■□□ 2.75
SSSCA1-207ENST00000533115 LRRC63Q05C16 580 aa32.22■■■□□ 2.75
SSSCA1-207ENST00000533115 KRT39Q6A163 491 aa32.22■■■□□ 2.75
SSSCA1-207ENST00000533115 ISM2Q6H9L7 571 aa32.22■■■□□ 2.75
SSSCA1-207ENST00000533115 ZC3H3Q8IXZ2 948 aaKnown RBP32.22■■■□□ 2.75
SSSCA1-207ENST00000533115 TTLL2Q9BWV7 592 aa32.22■■■□□ 2.75
SSSCA1-207ENST00000533115 APOBEC3GQ9HC16 384 aaKnown RBP32.22■■■□□ 2.75
SSSCA1-207ENST00000533115 TRPC7Q9HCX4 862 aa32.22■■■□□ 2.75
SSSCA1-207ENST00000533115 CHMP5Q9NZZ3 219 aa32.22■■■□□ 2.75
SSSCA1-207ENST00000533115 ATP8B3O60423 1300 aa32.22■■■□□ 2.75
SSSCA1-207ENST00000533115 F5P12259 2224 aa32.22■■■□□ 2.75
SSSCA1-207ENST00000533115 SLC16A3O15427 465 aaKnown RBP32.21■■■□□ 2.75
SSSCA1-207ENST00000533115 STX10O60499 249 aa32.21■■■□□ 2.75
SSSCA1-207ENST00000533115 MAGEA9P43362 315 aa32.21■■■□□ 2.75
SSSCA1-207ENST00000533115 NDST1P52848 882 aa32.21■■■□□ 2.75
SSSCA1-207ENST00000533115 STIM1Q13586 685 aa32.21■■■□□ 2.75
SSSCA1-207ENST00000533115 ZNF268Q14587 947 aaPredicted RBP32.21■■■□□ 2.75
SSSCA1-207ENST00000533115 ACOT1Q86TX2 421 aa32.21■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms