RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 DDX24Q9GZR7 859 aaKnown RBP eCLIP1.91□□□□□ -2.11e-6■■□□□ 12.5
KNL1-211ENST00000533001 ZNF302Q9NR11 478 aa1.91□□□□□ -2.1
KNL1-211ENST00000533001 WSB2Q9NYS7 404 aaPredicted RBP1.91□□□□□ -2.1
KNL1-211ENST00000533001 GULP1Q9UBP9 304 aa1.91□□□□□ -2.1
KNL1-211ENST00000533001 DBR1Q9UK59 544 aaKnown RBP1.91□□□□□ -2.1
KNL1-211ENST00000533001 PCDHB13Q9Y5F0 798 aa1.91□□□□□ -2.1
KNL1-211ENST00000533001 DNAH11Q96DT5 4516 aa1.91□□□□□ -2.1
KNL1-211ENST00000533001 DNAH6Q9C0G6 4158 aa1.91□□□□□ -2.1
KNL1-211ENST00000533001 SMCO2A6NFE2 343 aa1.91□□□□□ -2.1
KNL1-211ENST00000533001 BTBD18B2RXH4 712 aa1.91□□□□□ -2.1
KNL1-211ENST00000533001 NTN3O00634 580 aaPredicted RBP1.91□□□□□ -2.1
KNL1-211ENST00000533001 JAK2O60674 1132 aa1.91□□□□□ -2.1
KNL1-211ENST00000533001 RPLP2P05387 115 aaKnown RBP1.91□□□□□ -2.1
KNL1-211ENST00000533001 XRCC6P12956 609 aaKnown RBP eCLIP1.91□□□□□ -2.1
KNL1-211ENST00000533001 GALK1P51570 392 aa1.91□□□□□ -2.1
KNL1-211ENST00000533001 DHX32Q7L7V1 743 aaKnown RBP1.91□□□□□ -2.1
KNL1-211ENST00000533001 SRGAP1Q7Z6B7 1085 aa1.91□□□□□ -2.1
KNL1-211ENST00000533001 CLEC14AQ86T13 490 aa1.91□□□□□ -2.1
KNL1-211ENST00000533001 GPIHBP1Q8IV16 184 aa1.91□□□□□ -2.1
KNL1-211ENST00000533001 AMER2Q8N7J2 671 aa1.91□□□□□ -2.1
KNL1-211ENST00000533001 MCRS1Q96EZ8 462 aa1.91□□□□□ -2.1
KNL1-211ENST00000533001 LXNQ9BS40 222 aa1.91□□□□□ -2.1
KNL1-211ENST00000533001 ATP6V0A4Q9HBG4 840 aa1.91□□□□□ -2.1
KNL1-211ENST00000533001 POLMQ9NP87 494 aaPredicted RBP1.91□□□□□ -2.1
KNL1-211ENST00000533001 CYLDQ9NQC7 956 aa1.91□□□□□ -2.1
KNL1-211ENST00000533001 NXF1Q9UBU9 619 aaKnown RBP1.91□□□□□ -2.1
KNL1-211ENST00000533001 MN1Q10571 1320 aaPredicted RBP1.91□□□□□ -2.1
KNL1-211ENST00000533001 PYCARD-AS1I3L0S3 204 aa1.91□□□□□ -2.1
KNL1-211ENST00000533001 TULP2O00295 520 aa1.91□□□□□ -2.1
KNL1-211ENST00000533001 SH3BP5O60239 455 aa1.91□□□□□ -2.1
KNL1-211ENST00000533001 CACNG3O60359 315 aa1.91□□□□□ -2.1
KNL1-211ENST00000533001 CSPG5O95196 566 aa1.91□□□□□ -2.1
KNL1-211ENST00000533001 GLUD1P00367 558 aa1.91□□□□□ -2.1
KNL1-211ENST00000533001 ENGP17813 658 aa1.91□□□□□ -2.1
KNL1-211ENST00000533001 BMP6P22004 513 aa1.91□□□□□ -2.1
KNL1-211ENST00000533001 CNR2P34972 360 aa1.91□□□□□ -2.1
KNL1-211ENST00000533001 NOP14P78316 857 aaKnown RBP1.91□□□□□ -2.1
KNL1-211ENST00000533001 GTF2BQ00403 316 aa1.91□□□□□ -2.1
KNL1-211ENST00000533001 CSTF1Q05048 431 aaKnown RBP1.91□□□□□ -2.1
KNL1-211ENST00000533001 GEN1Q17RS7 908 aa1.91□□□□□ -2.1
KNL1-211ENST00000533001 TPRNQ4KMQ1 711 aa1.91□□□□□ -2.1
KNL1-211ENST00000533001 RAB41Q5JT25 222 aa1.91□□□□□ -2.1
KNL1-211ENST00000533001 GLRA4Q5JXX5 417 aa1.91□□□□□ -2.1
KNL1-211ENST00000533001 LAYNQ6UX15 382 aa1.91□□□□□ -2.1
KNL1-211ENST00000533001 DDX51Q8N8A6 666 aaKnown RBP eCLIP1.91□□□□□ -2.1
KNL1-211ENST00000533001 GIMAP8Q8ND71 665 aaPredicted RBP1.91□□□□□ -2.1
KNL1-211ENST00000533001 FAM3CQ92520 227 aa1.91□□□□□ -2.1
KNL1-211ENST00000533001 CCDC51Q96ER9 411 aa1.91□□□□□ -2.1
KNL1-211ENST00000533001 FAM129BQ96TA1 746 aa1.91□□□□□ -2.1
KNL1-211ENST00000533001 TARS2Q9BW92 718 aaKnown RBP1.91□□□□□ -2.1
KNL1-211ENST00000533001 SH2B1Q9NRF2 756 aaPredicted RBP1.91□□□□□ -2.1
KNL1-211ENST00000533001 PDP2Q9P2J9 529 aa1.91□□□□□ -2.1
KNL1-211ENST00000533001 HDAC5Q9UQL6 1122 aa1.91□□□□□ -2.1
KNL1-211ENST00000533001 FSD2A1L4K1 749 aa1.9□□□□□ -2.1
KNL1-211ENST00000533001 TMEM8BA6NDV4 472 aa1.9□□□□□ -2.1
KNL1-211ENST00000533001 TRABD2BA6NFA1 517 aa1.9□□□□□ -2.1
KNL1-211ENST00000533001 CASTOR2A6NHX0 329 aa1.9□□□□□ -2.1
KNL1-211ENST00000533001 C6P13671 934 aa1.9□□□□□ -2.1
KNL1-211ENST00000533001 EFNA3P52797 238 aa1.9□□□□□ -2.1
KNL1-211ENST00000533001 SNRPNP63162 240 aaKnown RBP1.9□□□□□ -2.1
KNL1-211ENST00000533001 IGBP1P78318 339 aa1.9□□□□□ -2.1
KNL1-211ENST00000533001 INSM1Q01101 510 aaPredicted RBP1.9□□□□□ -2.1
KNL1-211ENST00000533001 SUZ12Q15022 739 aaKnown RBP1.9□□□□□ -2.1
KNL1-211ENST00000533001 PCBP1Q15365 356 aaKnown RBP eCLIP1.9□□□□□ -2.1
KNL1-211ENST00000533001 IFIT1BQ5T764 474 aaKnown RBP1.9□□□□□ -2.1
KNL1-211ENST00000533001 LAPTM4BQ86VI4 370 aa1.9□□□□□ -2.1
KNL1-211ENST00000533001 TMEM25Q86YD3 366 aa1.9□□□□□ -2.1
KNL1-211ENST00000533001 ZNF710Q8N1W2 664 aa1.9□□□□□ -2.1
KNL1-211ENST00000533001 CDHR1Q96JP9 859 aa1.9□□□□□ -2.1
KNL1-211ENST00000533001 PRMT1Q99873 361 aaKnown RBP1.9□□□□□ -2.1
KNL1-211ENST00000533001 IRF2BPLQ9H1B7 796 aa1.9□□□□□ -2.1
KNL1-211ENST00000533001 TMEM8AQ9HCN3 771 aa1.9□□□□□ -2.1
KNL1-211ENST00000533001 ARHGAP26Q9UNA1 814 aa1.9□□□□□ -2.1
KNL1-211ENST00000533001 LHX6Q9UPM6 363 aa1.9□□□□□ -2.1
KNL1-211ENST00000533001 CEP131Q9UPN4 1083 aa1.9□□□□□ -2.1
KNL1-211ENST00000533001 IQCJ-SCHIP1C9J366 451 aaPredicted RBP1.9□□□□□ -2.1
KNL1-211ENST00000533001 PCDHGA12O60330 932 aa1.9□□□□□ -2.1
KNL1-211ENST00000533001 CDC45O75419 566 aa1.9□□□□□ -2.1
KNL1-211ENST00000533001 VNN1O95497 513 aa1.9□□□□□ -2.1
KNL1-211ENST00000533001 NFICP08651 508 aa1.9□□□□□ -2.1
KNL1-211ENST00000533001 FTH1P19P0C7X4 201 aa1.9□□□□□ -2.1
KNL1-211ENST00000533001 HAPLN1P10915 354 aaPredicted RBP1.9□□□□□ -2.1
KNL1-211ENST00000533001 FSHRP23945 695 aa1.9□□□□□ -2.1
KNL1-211ENST00000533001 ACSL1P33121 698 aa1.9□□□□□ -2.1
KNL1-211ENST00000533001 GCGRP47871 477 aa1.9□□□□□ -2.1
KNL1-211ENST00000533001 CXCL12P48061 93 aa1.9□□□□□ -2.1
KNL1-211ENST00000533001 ALDH7A1P49419 539 aaKnown RBP1.9□□□□□ -2.1
KNL1-211ENST00000533001 GIT2Q14161 759 aa1.9□□□□□ -2.1
KNL1-211ENST00000533001 EMC2Q15006 297 aa1.9□□□□□ -2.1
KNL1-211ENST00000533001 EPHA7Q15375 998 aa1.9□□□□□ -2.1
KNL1-211ENST00000533001 FAM133BQ5BKY9 247 aaKnown RBP1.9□□□□□ -2.1
KNL1-211ENST00000533001 SHISA5Q8N114 240 aa1.9□□□□□ -2.1
KNL1-211ENST00000533001 CCDC155Q8N6L0 562 aa1.9□□□□□ -2.1
KNL1-211ENST00000533001 PNPLA1Q8N8W4 532 aa1.9□□□□□ -2.1
KNL1-211ENST00000533001 RNF149Q8NC42 400 aa1.9□□□□□ -2.1
KNL1-211ENST00000533001 SPOCK2Q92563 424 aa1.9□□□□□ -2.1
KNL1-211ENST00000533001 TCTN2Q96GX1 697 aa1.9□□□□□ -2.1
KNL1-211ENST00000533001 ZBED2Q9BTP6 218 aa1.9□□□□□ -2.1
KNL1-211ENST00000533001 MLXIPQ9HAP2 919 aa1.9□□□□□ -2.1
KNL1-211ENST00000533001 ANKEF1Q9NU02 776 aa1.9□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms