RNA–Protein interactions for RNA: ENST00000532751.1

PTPRK-222, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 4

Gene PTPRK, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-222ENST00000532751 NUP210Q8TEM1 1887 aaPredicted RBP23.34■■□□□ 1.33
PTPRK-222ENST00000532751 ZNF638Q14966 1978 aaKnown RBP23.34■■□□□ 1.33
PTPRK-222ENST00000532751 F8VP50 259 aa23.33■■□□□ 1.33
PTPRK-222ENST00000532751 CLDN5O00501 218 aa23.33■■□□□ 1.33
PTPRK-222ENST00000532751 GPR37L1O60883 481 aa23.33■■□□□ 1.33
PTPRK-222ENST00000532751 MTIF2P46199 727 aaKnown RBP23.33■■□□□ 1.33
PTPRK-222ENST00000532751 LRMPQ12912 555 aa23.33■■□□□ 1.33
PTPRK-222ENST00000532751 ORC1Q13415 861 aa23.33■■□□□ 1.33
PTPRK-222ENST00000532751 CUL2Q13617 745 aa23.33■■□□□ 1.33
PTPRK-222ENST00000532751 TMEM31Q5JXX7 168 aa23.33■■□□□ 1.33
PTPRK-222ENST00000532751 DENND5BQ6ZUT9 1274 aa23.33■■□□□ 1.33
PTPRK-222ENST00000532751 FAM35AQ86V20 835 aa23.33■■□□□ 1.33
PTPRK-222ENST00000532751 STKLD1Q8NE28 680 aa23.33■■□□□ 1.33
PTPRK-222ENST00000532751 TRMT2BQ96GJ1 504 aaKnown RBP23.33■■□□□ 1.33
PTPRK-222ENST00000532751 SMARCD1Q96GM5 515 aa23.33■■□□□ 1.33
PTPRK-222ENST00000532751 TWNKQ96RR1 684 aa23.33■■□□□ 1.33
PTPRK-222ENST00000532751 ZFP14Q9HCL3 533 aa23.33■■□□□ 1.33
PTPRK-222ENST00000532751 CISHQ9NSE2 258 aa23.33■■□□□ 1.33
PTPRK-222ENST00000532751 ANO10Q9NW15 660 aa23.33■■□□□ 1.33
PTPRK-222ENST00000532751 ECI2O75521 394 aa23.32■■□□□ 1.32
PTPRK-222ENST00000532751 GPR158Q5T848 1215 aa23.32■■□□□ 1.32
PTPRK-222ENST00000532751 EHBP1Q8NDI1 1231 aa23.32■■□□□ 1.32
PTPRK-222ENST00000532751 ST13P5Q8NFI4 369 aaPredicted RBP23.32■■□□□ 1.32
PTPRK-222ENST00000532751 ZSCAN18Q8TBC5 510 aaPredicted RBP23.32■■□□□ 1.32
PTPRK-222ENST00000532751 SMARCD2Q92925 531 aa23.32■■□□□ 1.32
PTPRK-222ENST00000532751 MYRFLQ96LU7 910 aa23.32■■□□□ 1.32
PTPRK-222ENST00000532751 ASB16Q96NS5 453 aa23.32■■□□□ 1.32
PTPRK-222ENST00000532751 NRG2O14511 850 aaPredicted RBP23.31■■□□□ 1.32
PTPRK-222ENST00000532751 F11P03951 625 aa23.31■■□□□ 1.32
PTPRK-222ENST00000532751 CCDC130P13994 396 aa23.31■■□□□ 1.32
PTPRK-222ENST00000532751 PTMSP20962 102 aa23.31■■□□□ 1.32
PTPRK-222ENST00000532751 CYP4F8P98187 520 aa23.31■■□□□ 1.32
PTPRK-222ENST00000532751 STX1AQ16623 288 aa23.31■■□□□ 1.32
PTPRK-222ENST00000532751 ZNF394Q53GI3 561 aa23.31■■□□□ 1.32
PTPRK-222ENST00000532751 FAM78AQ5JUQ0 283 aa23.31■■□□□ 1.32
PTPRK-222ENST00000532751 IRF2BP1Q8IU81 584 aa23.31■■□□□ 1.32
PTPRK-222ENST00000532751 FUKQ8N0W3 1084 aa23.31■■□□□ 1.32
PTPRK-222ENST00000532751 SLC2A14Q8TDB8 520 aa23.31■■□□□ 1.32
PTPRK-222ENST00000532751 WHAMMQ8TF30 809 aa23.31■■□□□ 1.32
PTPRK-222ENST00000532751 MRPS31Q92665 395 aaKnown RBP23.31■■□□□ 1.32
PTPRK-222ENST00000532751 E2F7Q96AV8 911 aa23.31■■□□□ 1.32
PTPRK-222ENST00000532751 ELSPBP1Q96BH3 223 aa23.31■■□□□ 1.32
PTPRK-222ENST00000532751 ZSWIM3Q96MP5 696 aa23.31■■□□□ 1.32
PTPRK-222ENST00000532751 ARID3AQ99856 593 aa23.31■■□□□ 1.32
PTPRK-222ENST00000532751 KXD1Q9BQD3 176 aa23.31■■□□□ 1.32
PTPRK-222ENST00000532751 SMOC2Q9H3U7 446 aa23.31■■□□□ 1.32
PTPRK-222ENST00000532751 TASP1Q9H6P5 420 aa23.31■■□□□ 1.32
PTPRK-222ENST00000532751 DMAP1Q9NPF5 467 aaPredicted RBP23.31■■□□□ 1.32
PTPRK-222ENST00000532751 FAM49BQ9NUQ9 324 aa23.31■■□□□ 1.32
PTPRK-222ENST00000532751 TECTAO75443 2155 aa23.3■■□□□ 1.32
PTPRK-222ENST00000532751 FAM86C2PA6NEL3 165 aa23.3■■□□□ 1.32
PTPRK-222ENST00000532751 AP1G2O75843 785 aa23.3■■□□□ 1.32
PTPRK-222ENST00000532751 SRFP11831 508 aa23.3■■□□□ 1.32
PTPRK-222ENST00000532751 DDX6P26196 483 aaKnown RBP eCLIP23.3■■□□□ 1.32
PTPRK-222ENST00000532751 POTEHQ6S545 545 aa23.3■■□□□ 1.32
PTPRK-222ENST00000532751 PAQR9Q6ZVX9 377 aa23.3■■□□□ 1.32
PTPRK-222ENST00000532751 PPM1KQ8N3J5 372 aa23.3■■□□□ 1.32
PTPRK-222ENST00000532751 C12orf29Q8N999 325 aa23.3■■□□□ 1.32
PTPRK-222ENST00000532751 ENOX1Q8TC92 643 aaKnown RBP23.3■■□□□ 1.32
PTPRK-222ENST00000532751 CYFIP2Q96F07 1278 aa23.3■■□□□ 1.32
PTPRK-222ENST00000532751 TMEM176AQ96HP8 235 aa23.3■■□□□ 1.32
PTPRK-222ENST00000532751 HNRNPABQ99729 332 aaKnown RBP23.3■■□□□ 1.32
PTPRK-222ENST00000532751 RPP25Q9BUL9 199 aaKnown RBP23.3■■□□□ 1.32
PTPRK-222ENST00000532751 KRT82Q9NSB4 513 aa23.3■■□□□ 1.32
PTPRK-222ENST00000532751 TMEM63CQ9P1W3 806 aa23.3■■□□□ 1.32
PTPRK-222ENST00000532751 ANAPC1Q9H1A4 1944 aa23.29■■□□□ 1.32
PTPRK-222ENST00000532751 TMEM221A6NGB7 291 aa23.29■■□□□ 1.32
PTPRK-222ENST00000532751 SOBPA7XYQ1 873 aa23.29■■□□□ 1.32
PTPRK-222ENST00000532751 PRR33A8MZF0 331 aa23.29■■□□□ 1.32
PTPRK-222ENST00000532751 M0R296 226 aa23.29■■□□□ 1.32
PTPRK-222ENST00000532751 NARSO43776 548 aaKnown RBP23.29■■□□□ 1.32
PTPRK-222ENST00000532751 ADORA2BP29275 332 aa23.29■■□□□ 1.32
PTPRK-222ENST00000532751 CACNA2D1P54289 1103 aa23.29■■□□□ 1.32
PTPRK-222ENST00000532751 MAN2A1Q16706 1144 aa23.29■■□□□ 1.32
PTPRK-222ENST00000532751 STXBP5Q5T5C0 1151 aa23.29■■□□□ 1.32
PTPRK-222ENST00000532751 TANGO2Q6ICL3 276 aa23.29■■□□□ 1.32
PTPRK-222ENST00000532751 NUP93Q8N1F7 819 aa23.29■■□□□ 1.32
PTPRK-222ENST00000532751 LMO3Q8TAP4 145 aa23.29■■□□□ 1.32
PTPRK-222ENST00000532751 HEXIM2Q96MH2 286 aaKnown RBP23.29■■□□□ 1.32
PTPRK-222ENST00000532751 TRPV4Q9HBA0 871 aa23.29■■□□□ 1.32
PTPRK-222ENST00000532751 C11orf16Q9NQ32 467 aa23.29■■□□□ 1.32
PTPRK-222ENST00000532751 FBXL21Q9UKT6 434 aa23.29■■□□□ 1.32
PTPRK-222ENST00000532751 RTN3O95197 1032 aaPredicted RBP23.28■■□□□ 1.32
PTPRK-222ENST00000532751 FAM200BP0CF97 657 aa23.28■■□□□ 1.32
PTPRK-222ENST00000532751 CAVIN1Q6NZI2 390 aaKnown RBP23.28■■□□□ 1.32
PTPRK-222ENST00000532751 TMEM150AQ86TG1 271 aa23.28■■□□□ 1.32
PTPRK-222ENST00000532751 TTLL2Q9BWV7 592 aa23.28■■□□□ 1.32
PTPRK-222ENST00000532751 INTS2Q9H0H0 1204 aaKnown RBP23.28■■□□□ 1.32
PTPRK-222ENST00000532751 GCNT4Q9P109 453 aa23.28■■□□□ 1.32
PTPRK-222ENST00000532751 NFE2L3Q9Y4A8 694 aa23.28■■□□□ 1.32
PTPRK-222ENST00000532751 PATJQ8NI35 1801 aa23.27■■□□□ 1.32
PTPRK-222ENST00000532751 DPYSL4O14531 572 aa23.27■■□□□ 1.32
PTPRK-222ENST00000532751 PRKCSHP14314 528 aaPredicted RBP23.27■■□□□ 1.32
PTPRK-222ENST00000532751 FCARP24071 287 aa23.27■■□□□ 1.32
PTPRK-222ENST00000532751 WEE1P30291 646 aa23.27■■□□□ 1.32
PTPRK-222ENST00000532751 RAD23BP54727 409 aa23.27■■□□□ 1.32
PTPRK-222ENST00000532751 GCNT1Q02742 428 aa23.27■■□□□ 1.32
PTPRK-222ENST00000532751 GBP6Q6ZN66 633 aa23.27■■□□□ 1.32
PTPRK-222ENST00000532751 ARID3BQ8IVW6 561 aaPredicted RBP23.27■■□□□ 1.32
PTPRK-222ENST00000532751 SLC4A11Q8NBS3 891 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms