RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 CYFIP2Q96F07 1278 aa26.36■■□□□ 1.81
USP48-214ENST00000532737 LRRC3Q9BY71 257 aa26.36■■□□□ 1.81
USP48-214ENST00000532737 AJAP1Q9UKB5 411 aaPredicted RBP26.36■■□□□ 1.81
USP48-214ENST00000532737 TRIM21P19474 475 aaKnown RBP26.35■■□□□ 1.81
USP48-214ENST00000532737 FSHRP23945 695 aa26.35■■□□□ 1.81
USP48-214ENST00000532737 GRIK1P39086 918 aa26.35■■□□□ 1.81
USP48-214ENST00000532737 VEPH1Q14D04 833 aa26.35■■□□□ 1.81
USP48-214ENST00000532737 GJD3Q8N144 294 aa26.35■■□□□ 1.81
USP48-214ENST00000532737 ITFG1Q8TB96 612 aa26.35■■□□□ 1.81
USP48-214ENST00000532737 JAKMIP2Q96AA8 810 aa26.35■■□□□ 1.81
USP48-214ENST00000532737 DOCK6Q96HP0 2047 aa26.35■■□□□ 1.81
USP48-214ENST00000532737 RPGRIP1Q96KN7 1286 aa26.35■■□□□ 1.81
USP48-214ENST00000532737 HNRNPABQ99729 332 aaKnown RBP26.35■■□□□ 1.81
USP48-214ENST00000532737 LSM14BQ9BX40 385 aaKnown RBP26.35■■□□□ 1.81
USP48-214ENST00000532737 DNAI2Q9GZS0 605 aa26.35■■□□□ 1.81
USP48-214ENST00000532737 PRKAG3Q9UGI9 489 aa26.35■■□□□ 1.81
USP48-214ENST00000532737 C5orf42Q9H799 3197 aa26.35■■□□□ 1.81
USP48-214ENST00000532737 F8VP50 259 aa26.34■■□□□ 1.81
USP48-214ENST00000532737 NRG2O14511 850 aaPredicted RBP26.34■■□□□ 1.81
USP48-214ENST00000532737 SP100P23497 879 aaPredicted RBP26.34■■□□□ 1.81
USP48-214ENST00000532737 ADORA2BP29275 332 aa26.34■■□□□ 1.81
USP48-214ENST00000532737 KLK7P49862 253 aa26.34■■□□□ 1.81
USP48-214ENST00000532737 EPHA5P54756 1037 aa26.34■■□□□ 1.81
USP48-214ENST00000532737 MFAP3P55082 362 aa26.34■■□□□ 1.81
USP48-214ENST00000532737 ZNF445P59923 1031 aa26.34■■□□□ 1.81
USP48-214ENST00000532737 ZP2Q05996 745 aa26.34■■□□□ 1.81
USP48-214ENST00000532737 MTMR3Q13615 1198 aa26.34■■□□□ 1.81
USP48-214ENST00000532737 SLC5A9Q2M3M2 681 aa26.34■■□□□ 1.81
USP48-214ENST00000532737 ENOSF1Q7L5Y1 443 aa26.34■■□□□ 1.81
USP48-214ENST00000532737 ITIH5Q86UX2 942 aa26.34■■□□□ 1.81
USP48-214ENST00000532737 TMC8Q8IU68 726 aa26.34■■□□□ 1.81
USP48-214ENST00000532737 ADHFE1Q8IWW8 467 aa26.34■■□□□ 1.81
USP48-214ENST00000532737 ZNF334Q9HCZ1 680 aaPredicted RBP26.34■■□□□ 1.81
USP48-214ENST00000532737 AVENQ9NQS1 362 aaPredicted RBP26.34■■□□□ 1.81
USP48-214ENST00000532737 DNAJC12Q9UKB3 198 aa26.34■■□□□ 1.81
USP48-214ENST00000532737 CNTN6Q9UQ52 1028 aa26.34■■□□□ 1.81
USP48-214ENST00000532737 ATP8B3O60423 1300 aa26.34■■□□□ 1.81
USP48-214ENST00000532737 FAM86C2PA6NEL3 165 aa26.33■■□□□ 1.81
USP48-214ENST00000532737 MYL4P12829 197 aa26.33■■□□□ 1.81
USP48-214ENST00000532737 HMGA1P17096 107 aaKnown RBP26.33■■□□□ 1.81
USP48-214ENST00000532737 CCR2P41597 374 aa26.33■■□□□ 1.81
USP48-214ENST00000532737 ZNF132P52740 706 aa26.33■■□□□ 1.81
USP48-214ENST00000532737 ARHGAP44Q17R89 818 aa26.33■■□□□ 1.81
USP48-214ENST00000532737 PPP1R26Q5T8A7 1209 aaPredicted RBP26.33■■□□□ 1.81
USP48-214ENST00000532737 KLHDC7AQ5VTJ3 777 aa26.33■■□□□ 1.81
USP48-214ENST00000532737 RBBP8NLQ8NC74 664 aaPredicted RBP26.33■■□□□ 1.81
USP48-214ENST00000532737 FAM122AQ96E09 287 aa26.33■■□□□ 1.81
USP48-214ENST00000532737 TCEAL4Q96EI5 215 aa26.33■■□□□ 1.81
USP48-214ENST00000532737 SMARCD1Q96GM5 515 aa26.33■■□□□ 1.81
USP48-214ENST00000532737 C8orf48Q96LL4 319 aa26.33■■□□□ 1.81
USP48-214ENST00000532737 FAM81BQ96LP2 452 aa26.33■■□□□ 1.81
USP48-214ENST00000532737 ASAH2Q9NR71 780 aa26.33■■□□□ 1.81
USP48-214ENST00000532737 KRT82Q9NSB4 513 aa26.33■■□□□ 1.81
USP48-214ENST00000532737 MRPS23Q9Y3D9 190 aaKnown RBP26.33■■□□□ 1.81
USP48-214ENST00000532737 SLC38A8A6NNN8 435 aa26.32■■□□□ 1.8
USP48-214ENST00000532737 GOLGA6L19H0YKK7 550 aa26.32■■□□□ 1.8
USP48-214ENST00000532737 TRIM66O15016 1216 aa26.32■■□□□ 1.8
USP48-214ENST00000532737 AP1G2O75843 785 aa26.32■■□□□ 1.8
USP48-214ENST00000532737 TPM4P67936 248 aa26.32■■□□□ 1.8
USP48-214ENST00000532737 UBXN1Q04323 297 aa26.32■■□□□ 1.8
USP48-214ENST00000532737 SYCP1Q15431 976 aa26.32■■□□□ 1.8
USP48-214ENST00000532737 PRSS36Q5K4E3 855 aa26.32■■□□□ 1.8
USP48-214ENST00000532737 CYP4A22Q5TCH4 519 aa26.32■■□□□ 1.8
USP48-214ENST00000532737 ARHGAP17Q68EM7 881 aa26.32■■□□□ 1.8
USP48-214ENST00000532737 PDZD4Q76G19 769 aaPredicted RBP26.32■■□□□ 1.8
USP48-214ENST00000532737 GET4Q7L5D6 327 aaPredicted RBP26.32■■□□□ 1.8
USP48-214ENST00000532737 SPATA17Q96L03 361 aa26.32■■□□□ 1.8
USP48-214ENST00000532737 MYADMQ96S97 322 aa26.32■■□□□ 1.8
USP48-214ENST00000532737 KCNK16Q96T55 309 aa26.32■■□□□ 1.8
USP48-214ENST00000532737 SMOQ99835 787 aa26.32■■□□□ 1.8
USP48-214ENST00000532737 RTN4Q9NQC3 1192 aaKnown RBP26.32■■□□□ 1.8
USP48-214ENST00000532737 SIK3Q9Y2K2 1263 aa26.32■■□□□ 1.8
USP48-214ENST00000532737 ARIH1Q9Y4X5 557 aaPredicted RBP26.32■■□□□ 1.8
USP48-214ENST00000532737 NOTCH4Q99466 2003 aa26.31■■□□□ 1.8
USP48-214ENST00000532737 C2CD4DB7Z1M9 353 aa26.31■■□□□ 1.8
USP48-214ENST00000532737 LOC730098B7Z3J9 87 aa26.31■■□□□ 1.8
USP48-214ENST00000532737 MOSPD3O75425 235 aa26.31■■□□□ 1.8
USP48-214ENST00000532737 BEST1O76090 585 aa26.31■■□□□ 1.8
USP48-214ENST00000532737 CALCAP01258 141 aa26.31■■□□□ 1.8
USP48-214ENST00000532737 PAEPP09466 180 aa26.31■■□□□ 1.8
USP48-214ENST00000532737 KRT5P13647 590 aa26.31■■□□□ 1.8
USP48-214ENST00000532737 CD19P15391 556 aa26.31■■□□□ 1.8
USP48-214ENST00000532737 TAF12Q16514 161 aa26.31■■□□□ 1.8
USP48-214ENST00000532737 LEMD2Q8NC56 503 aa26.31■■□□□ 1.8
USP48-214ENST00000532737 ZMIZ2Q8NF64 920 aa26.31■■□□□ 1.8
USP48-214ENST00000532737 TFAP2BQ92481 460 aa26.31■■□□□ 1.8
USP48-214ENST00000532737 NAP1L5Q96NT1 182 aaPredicted RBP26.31■■□□□ 1.8
USP48-214ENST00000532737 DMAP1Q9NPF5 467 aaPredicted RBP26.31■■□□□ 1.8
USP48-214ENST00000532737 PLCB1Q9NQ66 1216 aa26.31■■□□□ 1.8
USP48-214ENST00000532737 USTQ9Y2C2 406 aa26.31■■□□□ 1.8
USP48-214ENST00000532737 C19orf67A6NJJ6 358 aa26.3■■□□□ 1.8
USP48-214ENST00000532737 TEX33O43247 280 aa26.3■■□□□ 1.8
USP48-214ENST00000532737 NOL4O94818 638 aa26.3■■□□□ 1.8
USP48-214ENST00000532737 FAM200BP0CF97 657 aa26.3■■□□□ 1.8
USP48-214ENST00000532737 CSH1P0DML2 217 aa26.3■■□□□ 1.8
USP48-214ENST00000532737 CSH2P0DML3 217 aa26.3■■□□□ 1.8
USP48-214ENST00000532737 VDRP11473 427 aa26.3■■□□□ 1.8
USP48-214ENST00000532737 GJA1P17302 382 aa26.3■■□□□ 1.8
USP48-214ENST00000532737 ANXA13P27216 316 aa26.3■■□□□ 1.8
USP48-214ENST00000532737 OTOP3Q7RTS5 596 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms