RNA–Protein interactions for RNA: ENST00000532708.5

TRAF3IP2-212, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,956 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-212ENST00000532708 ABCB6Q9NP58 842 aa12.66□□□□□ -0.38
TRAF3IP2-212ENST00000532708 NLRC4Q9NPP4 1024 aa12.66□□□□□ -0.38
TRAF3IP2-212ENST00000532708 HSFX1Q9UBD0 423 aa12.66□□□□□ -0.38
TRAF3IP2-212ENST00000532708 USP15Q9Y4E8 981 aaPredicted RBP12.66□□□□□ -0.38
TRAF3IP2-212ENST00000532708 F8VP50 259 aa12.65□□□□□ -0.38
TRAF3IP2-212ENST00000532708 MBTPS2O43462 519 aa12.65□□□□□ -0.38
TRAF3IP2-212ENST00000532708 BEST1O76090 585 aa12.65□□□□□ -0.38
TRAF3IP2-212ENST00000532708 HOXA9P31269 272 aa12.65□□□□□ -0.38
TRAF3IP2-212ENST00000532708 SSTR3P32745 418 aaPredicted RBP12.65□□□□□ -0.38
TRAF3IP2-212ENST00000532708 ZNF132P52740 706 aa12.65□□□□□ -0.38
TRAF3IP2-212ENST00000532708 NTHL1P78549 312 aa12.65□□□□□ -0.38
TRAF3IP2-212ENST00000532708 ITIH3Q06033 890 aa12.65□□□□□ -0.38
TRAF3IP2-212ENST00000532708 RTL10Q7L3V2 364 aa12.65□□□□□ -0.38
TRAF3IP2-212ENST00000532708 GPIHBP1Q8IV16 184 aa12.65□□□□□ -0.38
TRAF3IP2-212ENST00000532708 TFAP2BQ92481 460 aa12.65□□□□□ -0.38
TRAF3IP2-212ENST00000532708 FAM81BQ96LP2 452 aa12.65□□□□□ -0.38
TRAF3IP2-212ENST00000532708 XPO4Q9C0E2 1151 aaKnown RBP12.65□□□□□ -0.38
TRAF3IP2-212ENST00000532708 GPR88Q9GZN0 384 aa12.65□□□□□ -0.38
TRAF3IP2-212ENST00000532708 DNAI2Q9GZS0 605 aa12.65□□□□□ -0.38
TRAF3IP2-212ENST00000532708 DNMT3BQ9UBC3 853 aaKnown RBP12.65□□□□□ -0.38
TRAF3IP2-212ENST00000532708 CNTN6Q9UQ52 1028 aa12.65□□□□□ -0.38
TRAF3IP2-212ENST00000532708 CYP26A1O43174 497 aa12.65□□□□□ -0.38
TRAF3IP2-212ENST00000532708 XYLBO75191 536 aa12.65□□□□□ -0.38
TRAF3IP2-212ENST00000532708 AP1G2O75843 785 aa12.65□□□□□ -0.38
TRAF3IP2-212ENST00000532708 BRD2P25440 801 aaKnown RBP12.65□□□□□ -0.38
TRAF3IP2-212ENST00000532708 MAGEA11P43364 429 aa12.65□□□□□ -0.38
TRAF3IP2-212ENST00000532708 EPHB3P54753 998 aa12.65□□□□□ -0.38
TRAF3IP2-212ENST00000532708 MTMR3Q13615 1198 aa12.65□□□□□ -0.38
TRAF3IP2-212ENST00000532708 SGO2Q562F6 1265 aa12.65□□□□□ -0.38
TRAF3IP2-212ENST00000532708 ATAT1Q5SQI0 421 aa12.65□□□□□ -0.38
TRAF3IP2-212ENST00000532708 PTCRAQ6ISU1 281 aaPredicted RBP12.65□□□□□ -0.38
TRAF3IP2-212ENST00000532708 VSTM1Q6UX27 236 aa12.65□□□□□ -0.38
TRAF3IP2-212ENST00000532708 HS6ST3Q8IZP7 471 aa12.65□□□□□ -0.38
TRAF3IP2-212ENST00000532708 ZNF512Q96ME7 567 aaPredicted RBP12.65□□□□□ -0.38
TRAF3IP2-212ENST00000532708 HNRNPABQ99729 332 aaKnown RBP12.65□□□□□ -0.38
TRAF3IP2-212ENST00000532708 ZSWIM1Q9BR11 485 aa12.65□□□□□ -0.38
TRAF3IP2-212ENST00000532708 CORO1BQ9BR76 489 aa12.65□□□□□ -0.38
TRAF3IP2-212ENST00000532708 STK33Q9BYT3 514 aa12.65□□□□□ -0.38
TRAF3IP2-212ENST00000532708 KRT82Q9NSB4 513 aa12.65□□□□□ -0.38
TRAF3IP2-212ENST00000532708 AP5Z1O43299 807 aa12.64□□□□□ -0.39
TRAF3IP2-212ENST00000532708 PAEPP09466 180 aa12.64□□□□□ -0.39
TRAF3IP2-212ENST00000532708 VDRP11473 427 aa12.64□□□□□ -0.39
TRAF3IP2-212ENST00000532708 IL9P15248 144 aa12.64□□□□□ -0.39
TRAF3IP2-212ENST00000532708 TERF1P54274 439 aa12.64□□□□□ -0.39
TRAF3IP2-212ENST00000532708 MAP3K7CLP57077 242 aa12.64□□□□□ -0.39
TRAF3IP2-212ENST00000532708 RPL10AP62906 217 aaKnown RBP12.64□□□□□ -0.39
TRAF3IP2-212ENST00000532708 SMAD4Q13485 552 aaKnown RBP12.64□□□□□ -0.39
TRAF3IP2-212ENST00000532708 DNAJB7Q7Z6W7 309 aaPredicted RBP12.64□□□□□ -0.39
TRAF3IP2-212ENST00000532708 ELMOD1Q8N336 334 aa12.64□□□□□ -0.39
TRAF3IP2-212ENST00000532708 SUSD6Q92537 303 aa12.64□□□□□ -0.39
TRAF3IP2-212ENST00000532708 SMARCD1Q96GM5 515 aa12.64□□□□□ -0.39
TRAF3IP2-212ENST00000532708 POMKQ9H5K3 350 aa12.64□□□□□ -0.39
TRAF3IP2-212ENST00000532708 A0A1W2PQC6 194 aa12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 FAM200BP0CF97 657 aa12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 PTPN2P17706 415 aa12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 PLD1Q13393 1074 aa12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 CBX2Q14781 532 aaPredicted RBP12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 GOLGA7BQ2TAP0 167 aa12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 FAM71AQ8IYT1 594 aa12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 ZMIZ2Q8NF64 920 aa12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 RIPOR3Q96MK2 946 aa12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 SMOQ99835 787 aa12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 TSPAN16Q9UKR8 245 aa12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 KIAA1257Q9ULG3 409 aa12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 MAGED2Q9UNF1 606 aaPredicted RBP12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 NOTCH4Q99466 2003 aa12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 ATP8B3O60423 1300 aa12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 TCF20Q9UGU0 1960 aaKnown RBP12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 SLC38A8A6NNN8 435 aa12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 F8VZ95 297 aa12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 O00370 1275 aa12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 TRIM66O15016 1216 aa12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 PAPLNO95428 1278 aa12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 RHOP08100 348 aa12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 RFX1P22670 979 aa12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 SP100P23497 879 aaPredicted RBP12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 ANXA13P27216 316 aa12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 MRPS5P82675 430 aaKnown RBP12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 IFRD2Q12894 506 aaPredicted RBP12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 VEPH1Q14D04 833 aa12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 TAF12Q16514 161 aa12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 PABPC1LQ4VXU2 614 aaKnown RBP12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 ARHGAP17Q68EM7 881 aa12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 CLEC20AQ6ZU45 233 aa12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 SLC47A2Q86VL8 602 aa12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 TTC30AQ86WT1 665 aa12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 UBA3Q8TBC4 463 aa12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 PSMG2Q969U7 264 aa12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 SPAG5Q96R06 1193 aa12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 ZNF334Q9HCZ1 680 aaPredicted RBP12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 DMAP1Q9NPF5 467 aaPredicted RBP12.63□□□□□ -0.39
TRAF3IP2-212ENST00000532708 NRG2O14511 850 aaPredicted RBP12.62□□□□□ -0.39
TRAF3IP2-212ENST00000532708 THAP12O43422 761 aa12.62□□□□□ -0.39
TRAF3IP2-212ENST00000532708 GFPT2O94808 682 aa12.62□□□□□ -0.39
TRAF3IP2-212ENST00000532708 CFHP08603 1231 aa12.62□□□□□ -0.39
TRAF3IP2-212ENST00000532708 MYL4P12829 197 aa12.62□□□□□ -0.39
TRAF3IP2-212ENST00000532708 GJA1P17302 382 aa12.62□□□□□ -0.39
TRAF3IP2-212ENST00000532708 GNA15P30679 374 aa12.62□□□□□ -0.39
TRAF3IP2-212ENST00000532708 PBX1P40424 430 aa12.62□□□□□ -0.39
TRAF3IP2-212ENST00000532708 MTHFRP42898 656 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms