RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 RBMX2Q9Y388 322 aaKnown RBP7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 AP4S1Q9Y587 144 aa7.09□□□□□ -1.27
TGFBR3-209ENST00000532540 LAMB4A4D0S4 1761 aa7.09□□□□□ -1.28
TGFBR3-209ENST00000532540 TNS1Q9HBL0 1735 aaKnown RBP7.09□□□□□ -1.28
TGFBR3-209ENST00000532540 A0A0J9YVX5 310 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 GCNT3O95395 438 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 GJB6O95452 261 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 ZNF286BP0CG31 522 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 KRT3P12035 628 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 CIITAP33076 1130 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 NR1H2P55055 460 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 C1QTNF8P60827 252 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 UNC13DQ70J99 1090 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 ECHDC2Q86YB7 292 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 GALNT4Q8N4A0 578 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 LRRC71Q8N4P6 559 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 OR6J1Q8NGC5 347 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 SUN5Q8TC36 379 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 GLT8D2Q9H1C3 349 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 BCAS3Q9H6U6 928 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 SLC38A10Q9HBR0 1119 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 COQ6Q9Y2Z9 468 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 STARD13Q9Y3M8 1113 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 SBF2Q86WG5 1849 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 A0A087X0T9 212 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 CCDC85CA6NKD9 419 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 GOLGA8CPA6NN73 597 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 RIPK2O43353 540 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 CALUO43852 315 aaPredicted RBP7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 ITGBL1O95965 494 aaPredicted RBP7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 FAM228BP0C875 321 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 PORP16435 677 aaPredicted RBP7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 PLCG1P19174 1290 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 PIK3CAP42336 1068 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 FSTL1Q12841 308 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 OVGP1Q12889 678 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 AUHQ13825 339 aaKnown RBP7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 ACAP1Q15027 740 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 SLC35G1Q2M3R5 365 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 RGS21Q2M5E4 152 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 LVRNQ6Q4G3 990 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 SATL1Q86VE3 508 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 RHOT2Q8IXI1 618 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 GMCL1P1Q8NEA9 526 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 GDPD5Q8WTR4 605 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 TRAPPC12Q8WVT3 735 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 SPIRE2Q8WWL2 714 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 OMA1Q96E52 524 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 MAK16Q9BXY0 300 aaKnown RBP7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 ALG13Q9NP73 1137 aaKnown RBP7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 RBPJLQ9UBG7 517 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 WARS2Q9UGM6 360 aaKnown RBP7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 DAPK2Q9UIK4 370 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 SPEF2Q9C093 1822 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 ZNF839A8K0R7 811 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 SRGAP2BP0DMP2 458 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 HOXD10P28358 340 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 ACADVLP49748 655 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 PRKCZQ05513 592 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 SH3D19Q5HYK7 790 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 FRA10AC1Q70Z53 315 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 GPR142Q7Z601 462 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 RFWD2Q8NHY2 731 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 DEPTORQ8TB45 409 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 AFG1LQ8WV93 481 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 RFFLQ8WZ73 363 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 BORCS5Q969J3 196 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 HSPBAP1Q96EW2 488 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 SNF8Q96H20 258 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 C9orf72Q96LT7 481 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 PHF20Q9BVI0 1012 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 RIOX1Q9H6W3 641 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 RNF19AQ9NV58 838 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 APOBEC2Q9Y235 224 aaKnown RBP7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 LRP5O75197 1615 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 CACNA1SQ13698 1873 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 MROH7Q68CQ1 1323 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 CFLARO15519 480 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 RHOBTB3O94955 611 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 MYBP10242 640 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 IDO1P14902 403 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 PSMC3P17980 439 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 NAT1P18440 290 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 ITIH2P19823 946 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 PMLP29590 882 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 COPB2P35606 906 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 YARSP54577 528 aaKnown RBP7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 ATP2C1P98194 919 aaPredicted RBP7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 TTLL4Q14679 1199 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 ARHGEF6Q15052 776 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 EFHC1Q5JVL4 640 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 OR52E8Q6IFG1 317 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 EXOC3L1Q86VI1 746 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 NUP93Q8N1F7 819 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 CAPSLQ8WWF8 208 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 JADE3Q92613 823 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 AK8Q96MA6 479 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 KCNK16Q96T55 309 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 PTPN18Q99952 460 aa7.08□□□□□ -1.28
TGFBR3-209ENST00000532540 WDR18Q9BV38 432 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms