RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 USP41Q3LFD5 358 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 LEXMQ3ZCV2 418 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 C4orf17Q53FE4 359 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 FAM171A1Q5VUB5 890 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 KANK3Q6NY19 840 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 LLGL2Q6P1M3 1020 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 ARMCX5Q6P1M9 558 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 GK5Q6ZS86 529 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 EPM2AIP1Q7L775 607 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 REC114Q7Z4M0 266 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 LRRTM3Q86VH5 581 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 PPFIBP1Q86W92 1011 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 CEP57Q86XR8 500 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 RNF168Q8IYW5 571 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 FMR1NBQ8N0W7 255 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 CACTIN-AS1Q8N1I8 211 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 ZNF507Q8TCN5 953 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 NOC3LQ8WTT2 800 aaKnown RBP6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 SCFD1Q8WVM8 642 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 CASP10Q92851 521 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 CCDC47Q96A33 483 aaKnown RBP6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 C18orf25Q96B23 403 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 SAAL1Q96ER3 474 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 B3GALT6Q96L58 329 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 KLHL5Q96PQ7 755 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 TM9SF2Q99805 663 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 CBWD1Q9BRT8 395 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 TTPALQ9BTX7 342 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 GPR62Q9BZJ7 368 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 PCIF1Q9H4Z3 704 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 GOLGA2P5Q9HBQ8 144 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 SLC39A2Q9NP94 309 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 CHST7Q9NS84 486 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 EXOC1Q9NV70 894 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 ZDHHC3Q9NYG2 299 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 CLEC1BQ9P126 229 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 TUBGCP4Q9UGJ1 667 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 BARX2Q9UMQ3 279 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 UBQLN1Q9UMX0 589 aaKnown RBP6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 DERAQ9Y315 318 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 NUB1Q9Y5A7 615 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 HCFC2Q9Y5Z7 792 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 MYH15Q9Y2K3 1946 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 CHD7Q9P2D1 2997 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 NLRC5Q86WI3 1866 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 UBE4BO95155 1302 aa6.24□□□□□ -1.41
HMGB1P42-201ENST00000532126 GOLGA8IPA6NC78 632 aa6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 GOLGA8JA6NMD2 632 aa6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 B2RBV5 119 aa6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 KIAA0391O15091 583 aaKnown RBP6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 TEX28O15482 410 aa6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 EXTL3O43909 919 aa6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 IL18RAPO95256 599 aa6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 ADRB2P07550 413 aa6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 NFICP08651 508 aa6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 CNPP09543 421 aaKnown RBP6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 BMP1P13497 986 aa6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 CYP3A5P20815 502 aa6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 LRPAP1P30533 357 aa6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 HOXD13P35453 343 aa6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 WDR4P57081 412 aaKnown RBP6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 SNRPFP62306 86 aaKnown RBP6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 RBM10P98175 930 aaKnown RBP6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 CREMQ03060 361 aa6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 STK4Q13043 487 aa6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 TMEM132DQ14C87 1099 aa6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 ZBTB6Q15916 424 aa6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 KNOP1Q1ED39 458 aaKnown RBP6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 BMT2Q1RMZ1 405 aa6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 JADE1Q6IE81 842 aa6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 ANKRD54Q6NXT1 300 aa6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 PDXDC1Q6P996 788 aa6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 CRELD2Q6UXH1 353 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 TMEM184AQ6ZMB5 413 aa6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 BNC2Q6ZN30 1099 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 SPATS2Q86XZ4 545 aaKnown RBP6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 NELFCDQ8IXH7 590 aa6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 GPR65Q8IYL9 337 aa6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 GPD1LQ8N335 351 aa6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 BEST2Q8NFU1 509 aa6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 VN1R2Q8NFZ6 395 aa6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 GOLGA5Q8TBA6 731 aa6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 SLC22A17Q8WUG5 538 aa6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 RIN2Q8WYP3 895 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 GRIP2Q9C0E4 1043 aa6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 ASB7Q9H672 318 aa6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 FBRSQ9HAH7 460 aa6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 RXFP1Q9HBX9 757 aa6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 AGPAT3Q9NRZ7 376 aa6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 RBAKQ9NYW8 714 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 CGNQ9P2M7 1197 aaKnown RBP6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 CD207Q9UJ71 328 aa6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 HOOK1Q9UJC3 728 aaKnown RBP6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 GTF2A1LQ9UNN4 478 aa6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 FAM50BQ9Y247 325 aa6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 C2CD2Q9Y426 696 aa6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 PRRC2BQ5JSZ5 2229 aaKnown RBP6.23□□□□□ -1.41
HMGB1P42-201ENST00000532126 KIAA1671Q9BY89 1806 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms