RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 PLAG1Q6DJT9 500 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 CPLX4Q7Z7G2 160 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 AMIGO3Q86WK7 504 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 TTC30AQ86WT1 665 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 PROSER1Q86XN7 944 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 LMNTD2Q8IXW0 634 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 ULK2Q8IYT8 1036 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 CEP57L1Q8IYX8 460 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 MPP5Q8N3R9 675 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 SLC15A4Q8N697 577 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 NLGN4YQ8NFZ3 816 aaPredicted RBP4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 OR1N1Q8NGS0 311 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 NKD2Q969F2 451 aaPredicted RBP4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 FAM120BQ96EK7 910 aaKnown RBP4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 CALML4Q96GE6 196 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 MEGF10Q96KG7 1140 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 NUDT22Q9BRQ3 303 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 TTPALQ9BTX7 342 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 SEZ6LQ9BYH1 1024 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 MUC13Q9H3R2 512 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 RABEP2Q9H5N1 569 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 ERVMER34-1Q9H9K5 563 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 GPR35Q9HC97 309 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 DLL4Q9NR61 685 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 DKK4Q9UBT3 224 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 AJAP1Q9UKB5 411 aaPredicted RBP4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 DAPP1Q9UN19 280 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 SMG5Q9UPR3 1016 aaKnown RBP4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 DNAJC16Q9Y2G8 782 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 OAS3Q9Y6K5 1087 aaKnown RBP4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 GPRASP1Q5JY77 1395 aa4.78□□□□□ -1.64
AC055878.1-201ENST00000531858 FITM1A5D6W6 292 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 AGAP14A8MT82 685 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 H3BNC9 293 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 SEPT4O43236 478 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 CCNT2O60583 730 aaKnown RBP4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 SLC43A1O75387 559 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 VIPP01282 170 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 CHGBP05060 677 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 GRPP07492 148 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 GJB1P08034 283 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 DBHP09172 617 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 TBXAS1P24557 533 aaPredicted RBP4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 VIPR2P41587 438 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 GP2P55259 537 aaKnown RBP4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 NKX3-2P78367 333 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 IL13RA1P78552 427 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 GALNT2Q10471 571 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 TBL3Q12788 808 aaKnown RBP4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 STK4Q13043 487 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 PRICKLE4Q2TBC4 344 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 TBRG1Q3YBR2 411 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 NUGGCQ68CJ6 796 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 TMEM200BQ69YZ2 307 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 OTUD7BQ6GQQ9 843 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 CYP20A1Q6UW02 462 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 ATF7IPQ6VMQ6 1270 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 PRR23CQ6ZRP0 262 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 RASGRP2Q7LDG7 609 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 ZNF572Q7Z3I7 529 aaPredicted RBP4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 PXKQ7Z7A4 578 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 GAS2L3Q86XJ1 694 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 ARL10Q8N8L6 244 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 DTX3Q8N9I9 347 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 FAM181AQ8N9Y4 354 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 PDZD8Q8NEN9 1154 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 OR8H1Q8NGG4 311 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 ETNPPLQ8TBG4 499 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 USP6NLQ92738 828 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 GFM2Q969S9 779 aaKnown RBP4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 C3orf49Q96BT1 292 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 APOPT1Q96IL0 206 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 ZNF668Q96K58 619 aaPredicted RBP4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 HRASLS5Q96KN8 279 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 FAM227BQ96M60 508 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 UIMC1Q96RL1 719 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 TMEM209Q96SK2 561 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 PACSIN1Q9BY11 444 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 ITPAQ9BY32 194 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 C7orf69Q9H7B7 122 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 CHODLQ9H9P2 273 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 PCDH18Q9HCL0 1135 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 CD248Q9HCU0 757 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 JKAMPQ9P055 326 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 MTRRQ9UBK8 725 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 CNOT7Q9UIV1 285 aaKnown RBP4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 RASAL2Q9UJF2 1139 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 RPS6KA6Q9UK32 745 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 RAXQ9Y2V3 346 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 SIT1Q9Y3P8 196 aa4.77□□□□□ -1.65
AC055878.1-201ENST00000531858 FAM90A18PA6NE21 464 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 FAM90A16PA6NEW6 464 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 PRSS29PA6NIE9 313 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 FAM90A9PA6NNJ1 464 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 FAM90A5PA8MXJ8 464 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 H0Y858 1186 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 TSPAN4O14817 238 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 MTSS1O43312 755 aa4.76□□□□□ -1.65
AC055878.1-201ENST00000531858 ERAL1O75616 437 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms