RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 TRIM21P19474 475 aaKnown RBP15.36■□□□□ 0.05
CPSF1-206ENST00000531480 BDNFP23560 247 aa15.36■□□□□ 0.05
CPSF1-206ENST00000531480 CACNA2D1P54289 1103 aa15.36■□□□□ 0.05
CPSF1-206ENST00000531480 EPHB3P54753 998 aa15.36■□□□□ 0.05
CPSF1-206ENST00000531480 RPL10AP62906 217 aaKnown RBP15.36■□□□□ 0.05
CPSF1-206ENST00000531480 CYP27A1Q02318 531 aa15.36■□□□□ 0.05
CPSF1-206ENST00000531480 UBXN1Q04323 297 aa15.36■□□□□ 0.05
CPSF1-206ENST00000531480 MGAT5BQ3V5L5 792 aa15.36■□□□□ 0.05
CPSF1-206ENST00000531480 ZNF394Q53GI3 561 aa15.36■□□□□ 0.05
CPSF1-206ENST00000531480 IQCEQ6IPM2 695 aa15.36■□□□□ 0.05
CPSF1-206ENST00000531480 TMEM270Q6UE05 265 aa15.36■□□□□ 0.05
CPSF1-206ENST00000531480 TMC8Q8IU68 726 aa15.36■□□□□ 0.05
CPSF1-206ENST00000531480 LEMD2Q8NC56 503 aa15.36■□□□□ 0.05
CPSF1-206ENST00000531480 SLC2A14Q8TDB8 520 aa15.36■□□□□ 0.05
CPSF1-206ENST00000531480 CYFIP2Q96F07 1278 aa15.36■□□□□ 0.05
CPSF1-206ENST00000531480 TRMT2BQ96GJ1 504 aaKnown RBP15.36■□□□□ 0.05
CPSF1-206ENST00000531480 SMARCD1Q96GM5 515 aa15.36■□□□□ 0.05
CPSF1-206ENST00000531480 MYRFLQ96LU7 910 aa15.36■□□□□ 0.05
CPSF1-206ENST00000531480 SEPT5Q99719 369 aaPredicted RBP15.36■□□□□ 0.05
CPSF1-206ENST00000531480 APOL5Q9BWW9 433 aa15.36■□□□□ 0.05
CPSF1-206ENST00000531480 POMKQ9H5K3 350 aa15.36■□□□□ 0.05
CPSF1-206ENST00000531480 PRKAG3Q9UGI9 489 aa15.36■□□□□ 0.05
CPSF1-206ENST00000531480 DNAJC12Q9UKB3 198 aa15.36■□□□□ 0.05
CPSF1-206ENST00000531480 CLUHO75153 1309 aa15.36■□□□□ 0.05
CPSF1-206ENST00000531480 SPDYE4A6NLX3 237 aa15.35■□□□□ 0.05
CPSF1-206ENST00000531480 CLDN5O00501 218 aa15.35■□□□□ 0.05
CPSF1-206ENST00000531480 PES1O00541 588 aaKnown RBP15.35■□□□□ 0.05
CPSF1-206ENST00000531480 VDRP11473 427 aa15.35■□□□□ 0.05
CPSF1-206ENST00000531480 CCDC130P13994 396 aa15.35■□□□□ 0.05
CPSF1-206ENST00000531480 IL9P15248 144 aa15.35■□□□□ 0.05
CPSF1-206ENST00000531480 HMGA1P17096 107 aaKnown RBP15.35■□□□□ 0.05
CPSF1-206ENST00000531480 PTPN2P17706 415 aa15.35■□□□□ 0.05
CPSF1-206ENST00000531480 PBX1P40424 430 aa15.35■□□□□ 0.05
CPSF1-206ENST00000531480 MRE11P49959 708 aa15.35■□□□□ 0.05
CPSF1-206ENST00000531480 FANCCQ00597 558 aa15.35■□□□□ 0.05
CPSF1-206ENST00000531480 SYCP1Q15431 976 aa15.35■□□□□ 0.05
CPSF1-206ENST00000531480 MEA1Q16626 185 aa15.35■□□□□ 0.05
CPSF1-206ENST00000531480 PKDCCQ504Y2 493 aa15.35■□□□□ 0.05
CPSF1-206ENST00000531480 PRSS36Q5K4E3 855 aa15.35■□□□□ 0.05
CPSF1-206ENST00000531480 PPP1R26Q5T8A7 1209 aaPredicted RBP15.35■□□□□ 0.05
CPSF1-206ENST00000531480 DNAJB7Q7Z6W7 309 aaPredicted RBP15.35■□□□□ 0.05
CPSF1-206ENST00000531480 ITIH5Q86UX2 942 aa15.35■□□□□ 0.05
CPSF1-206ENST00000531480 FAM71AQ8IYT1 594 aa15.35■□□□□ 0.05
CPSF1-206ENST00000531480 RBBP8NLQ8NC74 664 aaPredicted RBP15.35■□□□□ 0.05
CPSF1-206ENST00000531480 ZMIZ2Q8NF64 920 aa15.35■□□□□ 0.05
CPSF1-206ENST00000531480 ZNF512Q96ME7 567 aaPredicted RBP15.35■□□□□ 0.05
CPSF1-206ENST00000531480 HEXIM2Q96MH2 286 aaKnown RBP15.35■□□□□ 0.05
CPSF1-206ENST00000531480 ZSWIM1Q9BR11 485 aa15.35■□□□□ 0.05
CPSF1-206ENST00000531480 PHF7Q9BWX1 381 aaPredicted RBP15.35■□□□□ 0.05
CPSF1-206ENST00000531480 LSM14BQ9BX40 385 aaKnown RBP15.35■□□□□ 0.05
CPSF1-206ENST00000531480 PNPLA8Q9NP80 782 aa15.35■□□□□ 0.05
CPSF1-206ENST00000531480 FAM49BQ9NUQ9 324 aa15.35■□□□□ 0.05
CPSF1-206ENST00000531480 HCFC1R1Q9NWW0 138 aa15.35■□□□□ 0.05
CPSF1-206ENST00000531480 IL37Q9NZH6 218 aa15.35■□□□□ 0.05
CPSF1-206ENST00000531480 USTQ9Y2C2 406 aa15.35■□□□□ 0.05
CPSF1-206ENST00000531480 PCDHB4Q9Y5E5 795 aa15.35■□□□□ 0.05
CPSF1-206ENST00000531480 FHOD1Q9Y613 1164 aa15.35■□□□□ 0.05
CPSF1-206ENST00000531480 ATP8B3O60423 1300 aa15.35■□□□□ 0.05
CPSF1-206ENST00000531480 ANAPC1Q9H1A4 1944 aa15.35■□□□□ 0.05
CPSF1-206ENST00000531480 F8VP50 259 aa15.34■□□□□ 0.05
CPSF1-206ENST00000531480 O00370 1275 aa15.34■□□□□ 0.05
CPSF1-206ENST00000531480 TNFRSF10BO14763 440 aa15.34■□□□□ 0.05
CPSF1-206ENST00000531480 EPHB6O15197 1021 aa15.34■□□□□ 0.05
CPSF1-206ENST00000531480 RHOP08100 348 aa15.34■□□□□ 0.05
CPSF1-206ENST00000531480 CSH1P0DML2 217 aa15.34■□□□□ 0.05
CPSF1-206ENST00000531480 CSH2P0DML3 217 aa15.34■□□□□ 0.05
CPSF1-206ENST00000531480 GPR15P49685 360 aa15.34■□□□□ 0.05
CPSF1-206ENST00000531480 KLK7P49862 253 aa15.34■□□□□ 0.05
CPSF1-206ENST00000531480 CDR1P51861 262 aa15.34■□□□□ 0.05
CPSF1-206ENST00000531480 JAM2P57087 298 aa15.34■□□□□ 0.05
CPSF1-206ENST00000531480 DDR2Q16832 855 aa15.34■□□□□ 0.05
CPSF1-206ENST00000531480 FILIP1LQ4L180 1135 aa15.34■□□□□ 0.05
CPSF1-206ENST00000531480 LCLAT1Q6UWP7 414 aa15.34■□□□□ 0.05
CPSF1-206ENST00000531480 CLEC20AQ6ZU45 233 aa15.34■□□□□ 0.05
CPSF1-206ENST00000531480 GRASPQ7Z6J2 395 aaPredicted RBP15.34■□□□□ 0.05
CPSF1-206ENST00000531480 ELMOD1Q8N336 334 aa15.34■□□□□ 0.05
CPSF1-206ENST00000531480 TFAP2BQ92481 460 aa15.34■□□□□ 0.05
CPSF1-206ENST00000531480 SMOQ99835 787 aa15.34■□□□□ 0.05
CPSF1-206ENST00000531480 TTLL2Q9BWV7 592 aa15.34■□□□□ 0.05
CPSF1-206ENST00000531480 STK33Q9BYT3 514 aa15.34■□□□□ 0.05
CPSF1-206ENST00000531480 UBXN6Q9BZV1 441 aa15.34■□□□□ 0.05
CPSF1-206ENST00000531480 IL21Q9HBE4 155 aa15.34■□□□□ 0.05
CPSF1-206ENST00000531480 DMAP1Q9NPF5 467 aaPredicted RBP15.34■□□□□ 0.05
CPSF1-206ENST00000531480 FAM92AA1XBS5 289 aa15.33■□□□□ 0.04
CPSF1-206ENST00000531480 C19orf67A6NJJ6 358 aa15.33■□□□□ 0.04
CPSF1-206ENST00000531480 HHLA1C9JL84 531 aa15.33■□□□□ 0.04
CPSF1-206ENST00000531480 FOXN3O00409 490 aaPredicted RBP15.33■□□□□ 0.04
CPSF1-206ENST00000531480 MOSPD3O75425 235 aa15.33■□□□□ 0.04
CPSF1-206ENST00000531480 AP1G2O75843 785 aa15.33■□□□□ 0.04
CPSF1-206ENST00000531480 BEST1O76090 585 aa15.33■□□□□ 0.04
CPSF1-206ENST00000531480 SERPINC1P01008 464 aa15.33■□□□□ 0.04
CPSF1-206ENST00000531480 GRIK1P39086 918 aa15.33■□□□□ 0.04
CPSF1-206ENST00000531480 CCR2P41597 374 aa15.33■□□□□ 0.04
CPSF1-206ENST00000531480 VEPH1Q14D04 833 aa15.33■□□□□ 0.04
CPSF1-206ENST00000531480 STILQ15468 1287 aa15.33■□□□□ 0.04
CPSF1-206ENST00000531480 CNGA2Q16280 664 aa15.33■□□□□ 0.04
CPSF1-206ENST00000531480 SLC5A9Q2M3M2 681 aa15.33■□□□□ 0.04
CPSF1-206ENST00000531480 PABPC1LQ4VXU2 614 aaKnown RBP15.33■□□□□ 0.04
CPSF1-206ENST00000531480 SGO2Q562F6 1265 aa15.33■□□□□ 0.04
CPSF1-206ENST00000531480 GAS2L3Q86XJ1 694 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms