RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 RAP1GAPP47736 663 aa19.75■□□□□ 0.75
SSSCA1-206ENST00000531405 PSMC1P62191 440 aaKnown RBP19.75■□□□□ 0.75
SSSCA1-206ENST00000531405 AMPD2Q01433 879 aa19.75■□□□□ 0.75
SSSCA1-206ENST00000531405 USP4Q13107 963 aa19.75■□□□□ 0.75
SSSCA1-206ENST00000531405 CFAP221Q4G0U5 840 aa19.75■□□□□ 0.75
SSSCA1-206ENST00000531405 CCDC73Q6ZRK6 1079 aa19.75■□□□□ 0.75
SSSCA1-206ENST00000531405 GPD1LQ8N335 351 aa19.75■□□□□ 0.75
SSSCA1-206ENST00000531405 CPA6Q8N4T0 437 aa19.75■□□□□ 0.75
SSSCA1-206ENST00000531405 ARL14EPQ8N8R7 260 aaPredicted RBP19.75■□□□□ 0.75
SSSCA1-206ENST00000531405 OR5B17Q8NGF7 314 aa19.75■□□□□ 0.75
SSSCA1-206ENST00000531405 RPLP0P6Q8NHW5 317 aa19.75■□□□□ 0.75
SSSCA1-206ENST00000531405 OSCP1Q8WVF1 389 aa19.75■□□□□ 0.75
SSSCA1-206ENST00000531405 HPS3Q969F9 1004 aa19.75■□□□□ 0.75
SSSCA1-206ENST00000531405 CEP295Q9C0D2 2601 aa19.74■□□□□ 0.75
SSSCA1-206ENST00000531405 USP17L7P0C7H9 530 aa19.74■□□□□ 0.75
SSSCA1-206ENST00000531405 PDCP20941 246 aa19.74■□□□□ 0.75
SSSCA1-206ENST00000531405 SYT1P21579 422 aa19.74■□□□□ 0.75
SSSCA1-206ENST00000531405 LMO2P25791 158 aa19.74■□□□□ 0.75
SSSCA1-206ENST00000531405 IFNAR2P48551 515 aa19.74■□□□□ 0.75
SSSCA1-206ENST00000531405 LHX1P48742 406 aa19.74■□□□□ 0.75
SSSCA1-206ENST00000531405 ALCAMQ13740 583 aa19.74■□□□□ 0.75
SSSCA1-206ENST00000531405 PDILTQ8N807 584 aa19.74■□□□□ 0.75
SSSCA1-206ENST00000531405 C12orf50Q8NA57 414 aaPredicted RBP19.74■□□□□ 0.75
SSSCA1-206ENST00000531405 KBTBD7Q8WVZ9 684 aa19.74■□□□□ 0.75
SSSCA1-206ENST00000531405 USP28Q96RU2 1077 aa19.74■□□□□ 0.75
SSSCA1-206ENST00000531405 TMEM206Q9H813 350 aa19.74■□□□□ 0.75
SSSCA1-206ENST00000531405 INTS13Q9NVM9 706 aa19.74■□□□□ 0.75
SSSCA1-206ENST00000531405 GCNT4Q9P109 453 aa19.74■□□□□ 0.75
SSSCA1-206ENST00000531405 CFAP47Q6ZTR5 3102 aa19.74■□□□□ 0.75
SSSCA1-206ENST00000531405 MYO18AQ92614 2054 aaKnown RBP19.74■□□□□ 0.75
SSSCA1-206ENST00000531405 FOXD2O60548 495 aaPredicted RBP19.73■□□□□ 0.75
SSSCA1-206ENST00000531405 ZNF806P0C7X5 589 aa19.73■□□□□ 0.75
SSSCA1-206ENST00000531405 PCSK1P29120 753 aa19.73■□□□□ 0.75
SSSCA1-206ENST00000531405 PSMD2Q13200 908 aa19.73■□□□□ 0.75
SSSCA1-206ENST00000531405 EML3Q32P44 896 aa19.73■□□□□ 0.75
SSSCA1-206ENST00000531405 IL31Q6EBC2 164 aa19.73■□□□□ 0.75
SSSCA1-206ENST00000531405 FAM171BQ6P995 826 aa19.73■□□□□ 0.75
SSSCA1-206ENST00000531405 CBWD2Q8IUF1 395 aa19.73■□□□□ 0.75
SSSCA1-206ENST00000531405 SPATA18Q8TC71 538 aa19.73■□□□□ 0.75
SSSCA1-206ENST00000531405 SH3RF2Q8TEC5 729 aa19.73■□□□□ 0.75
SSSCA1-206ENST00000531405 CD101Q93033 1021 aa19.73■□□□□ 0.75
SSSCA1-206ENST00000531405 ATP2A3Q93084 1043 aa19.73■□□□□ 0.75
SSSCA1-206ENST00000531405 MYLPFQ96A32 169 aa19.73■□□□□ 0.75
SSSCA1-206ENST00000531405 FUBP3Q96I24 572 aaKnown RBP eCLIP19.73■□□□□ 0.75
SSSCA1-206ENST00000531405 HPDLQ96IR7 371 aa19.73■□□□□ 0.75
SSSCA1-206ENST00000531405 ANKRD36BP1Q96IX9 119 aa19.73■□□□□ 0.75
SSSCA1-206ENST00000531405 LOXL4Q96JB6 756 aa19.73■□□□□ 0.75
SSSCA1-206ENST00000531405 SYT15Q9BQS2 421 aa19.73■□□□□ 0.75
SSSCA1-206ENST00000531405 LINC00597Q9H2U6 94 aa19.73■□□□□ 0.75
SSSCA1-206ENST00000531405 CRTAC1Q9NQ79 661 aa19.73■□□□□ 0.75
SSSCA1-206ENST00000531405 DCLK1O15075 740 aa19.72■□□□□ 0.75
SSSCA1-206ENST00000531405 MYO1EQ12965 1108 aa19.72■□□□□ 0.75
SSSCA1-206ENST00000531405 KCNB1Q14721 858 aa19.72■□□□□ 0.75
SSSCA1-206ENST00000531405 CAMKK1Q8N5S9 505 aa19.72■□□□□ 0.75
SSSCA1-206ENST00000531405 MAGEC2Q9UBF1 373 aaPredicted RBP19.72■□□□□ 0.75
SSSCA1-206ENST00000531405 CEP192Q8TEP8 1941 aa19.71■□□□□ 0.75
SSSCA1-206ENST00000531405 ANTXRLA6NF34 631 aa19.71■□□□□ 0.75
SSSCA1-206ENST00000531405 AKAP3O75969 853 aa19.71■□□□□ 0.75
SSSCA1-206ENST00000531405 TNNC2P02585 160 aa19.71■□□□□ 0.75
SSSCA1-206ENST00000531405 PDGFRBP09619 1106 aa19.71■□□□□ 0.75
SSSCA1-206ENST00000531405 HDCP19113 662 aa19.71■□□□□ 0.75
SSSCA1-206ENST00000531405 BDNFP23560 247 aa19.71■□□□□ 0.75
SSSCA1-206ENST00000531405 HOXD13P35453 343 aa19.71■□□□□ 0.75
SSSCA1-206ENST00000531405 MPLP40238 635 aa19.71■□□□□ 0.75
SSSCA1-206ENST00000531405 MAGEA11P43364 429 aa19.71■□□□□ 0.75
SSSCA1-206ENST00000531405 USP46P62068 366 aa19.71■□□□□ 0.75
SSSCA1-206ENST00000531405 ZXDBP98169 803 aa19.71■□□□□ 0.75
SSSCA1-206ENST00000531405 DMC1Q14565 340 aa19.71■□□□□ 0.75
SSSCA1-206ENST00000531405 SLC39A14Q15043 492 aa19.71■□□□□ 0.75
SSSCA1-206ENST00000531405 PLK5Q496M5 336 aa19.71■□□□□ 0.75
SSSCA1-206ENST00000531405 FBXO43Q4G163 708 aa19.71■□□□□ 0.75
SSSCA1-206ENST00000531405 PLA2G2CQ5R387 149 aa19.71■□□□□ 0.75
SSSCA1-206ENST00000531405 C4orf50Q6ZRC1 276 aa19.71■□□□□ 0.75
SSSCA1-206ENST00000531405 SYT13Q7L8C5 426 aa19.71■□□□□ 0.75
SSSCA1-206ENST00000531405 LIMS2Q7Z4I7 341 aa19.71■□□□□ 0.75
SSSCA1-206ENST00000531405 CCDC65Q8IXS2 484 aa19.71■□□□□ 0.75
SSSCA1-206ENST00000531405 FSIP1Q8NA03 581 aa19.71■□□□□ 0.75
SSSCA1-206ENST00000531405 ZC3H10Q96K80 434 aaKnown RBP19.71■□□□□ 0.75
SSSCA1-206ENST00000531405 DUSP15Q9H1R2 295 aaPredicted RBP19.71■□□□□ 0.75
SSSCA1-206ENST00000531405 CDH9Q9ULB4 789 aa19.71■□□□□ 0.75
SSSCA1-206ENST00000531405 R3HCC1Q9Y3T6 440 aaKnown RBP19.71■□□□□ 0.75
SSSCA1-206ENST00000531405 TNRC6BQ9UPQ9 1833 aaKnown RBP19.7■□□□□ 0.74
SSSCA1-206ENST00000531405 ZNF233A6NK53 670 aa19.7■□□□□ 0.74
SSSCA1-206ENST00000531405 GRIK1P39086 918 aa19.7■□□□□ 0.74
SSSCA1-206ENST00000531405 LIMK1P53667 647 aa19.7■□□□□ 0.74
SSSCA1-206ENST00000531405 CYP27A1Q02318 531 aa19.7■□□□□ 0.74
SSSCA1-206ENST00000531405 STPG1Q5TH74 334 aa19.7■□□□□ 0.74
SSSCA1-206ENST00000531405 TCEAL6Q6IPX3 200 aa19.7■□□□□ 0.74
SSSCA1-206ENST00000531405 DPH6Q7L8W6 267 aa19.7■□□□□ 0.74
SSSCA1-206ENST00000531405 TCEAL3Q969E4 200 aa19.7■□□□□ 0.74
SSSCA1-206ENST00000531405 EXOC4Q96A65 974 aa19.7■□□□□ 0.74
SSSCA1-206ENST00000531405 FOXD4L1Q9NU39 408 aa19.7■□□□□ 0.74
SSSCA1-206ENST00000531405 HSPBP1Q9NZL4 362 aa19.7■□□□□ 0.74
SSSCA1-206ENST00000531405 ARHGAP26Q9UNA1 814 aa19.7■□□□□ 0.74
SSSCA1-206ENST00000531405 MTMR6Q9Y217 621 aa19.7■□□□□ 0.74
SSSCA1-206ENST00000531405 NME7Q9Y5B8 376 aa19.7■□□□□ 0.74
SSSCA1-206ENST00000531405 ZFHX4Q86UP3 3567 aa19.69■□□□□ 0.74
SSSCA1-206ENST00000531405 APBB3O95704 486 aa19.69■□□□□ 0.74
SSSCA1-206ENST00000531405 SEC13P55735 322 aa19.69■□□□□ 0.74
SSSCA1-206ENST00000531405 DUOXA2Q1HG44 320 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms