RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 GSNP06396 782 aa8.8□□□□□ -1
CTNND1-225ENST00000530094 HLA-DPA1P20036 260 aa8.8□□□□□ -1
CTNND1-225ENST00000530094 NCALDP61601 193 aa8.8□□□□□ -1
CTNND1-225ENST00000530094 USP49Q70CQ1 688 aa8.8□□□□□ -1
CTNND1-225ENST00000530094 H2AFY2Q9P0M6 372 aaPredicted RBP8.8□□□□□ -1
CTNND1-225ENST00000530094 CRLS1Q9UJA2 301 aa8.8□□□□□ -1
CTNND1-225ENST00000530094 TBX20Q9UMR3 447 aa8.8□□□□□ -1
CTNND1-225ENST00000530094 TRPC5OSA6NMA1 111 aa8.8□□□□□ -1
CTNND1-225ENST00000530094 MAN1A2O60476 641 aa8.8□□□□□ -1
CTNND1-225ENST00000530094 APRTP07741 180 aa8.8□□□□□ -1
CTNND1-225ENST00000530094 AKR1A1P14550 325 aa8.8□□□□□ -1
CTNND1-225ENST00000530094 CAPZA2P47755 286 aa8.8□□□□□ -1
CTNND1-225ENST00000530094 LHX1P48742 406 aa8.8□□□□□ -1
CTNND1-225ENST00000530094 GALCP54803 685 aa8.8□□□□□ -1
CTNND1-225ENST00000530094 GRAMD4Q6IC98 578 aa8.8□□□□□ -1
CTNND1-225ENST00000530094 TFB1MQ8WVM0 346 aaKnown RBP8.8□□□□□ -1
CTNND1-225ENST00000530094 CYFIP2Q96F07 1278 aa8.8□□□□□ -1
CTNND1-225ENST00000530094 WNK4Q96J92 1243 aa8.8□□□□□ -1
CTNND1-225ENST00000530094 PLEKHA8Q96JA3 519 aa8.8□□□□□ -1
CTNND1-225ENST00000530094 FAR2Q96K12 515 aa8.8□□□□□ -1
CTNND1-225ENST00000530094 RMDN2Q96LZ7 410 aa8.8□□□□□ -1
CTNND1-225ENST00000530094 KCNK16Q96T55 309 aa8.8□□□□□ -1
CTNND1-225ENST00000530094 ZNF518BQ9C0D4 1074 aa8.8□□□□□ -1
CTNND1-225ENST00000530094 KLK14Q9P0G3 267 aa8.8□□□□□ -1
CTNND1-225ENST00000530094 MYMKA6NI61 221 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 C2CD2LO14523 706 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 FKTNO75072 461 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 VDRP11473 427 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 SREBF1P36956 1147 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 PLA2G4AP47712 749 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 GEMIN4P57678 1058 aaKnown RBP8.79□□□□□ -1
CTNND1-225ENST00000530094 PDK2Q15119 407 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 DNERQ8NFT8 737 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 GFM2Q969S9 779 aaKnown RBP8.79□□□□□ -1
CTNND1-225ENST00000530094 CCDC126Q96EE4 140 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 HES6Q96HZ4 224 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 CCDC90BQ9GZT6 254 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 TASP1Q9H6P5 420 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 ENTPD7Q9NQZ7 604 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 DCTN4Q9UJW0 460 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 GRID1Q9ULK0 1009 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 NEU2Q9Y3R4 380 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 FRMD3A2A2Y4 597 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 OGTO15294 1046 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 TBC1D4O60343 1298 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 TRIM16O95361 564 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 SNRPAP09012 282 aaKnown RBP8.79□□□□□ -1
CTNND1-225ENST00000530094 NCAM1P13591 858 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 RAG1P15918 1043 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 KLRC1P26715 233 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 ALDH5A1P51649 535 aaPredicted RBP8.79□□□□□ -1
CTNND1-225ENST00000530094 EPHB3P54753 998 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 ITGA9Q13797 1035 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 DCAF6Q58WW2 860 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 AGBL2Q5U5Z8 902 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 PCNX4Q63HM2 1172 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 GPAT2Q6NUI2 795 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 C16orf87Q6PH81 154 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 TRIM65Q6PJ69 517 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 TLK2Q86UE8 772 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 PPIL6Q8IXY8 311 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 OSCP1Q8WVF1 389 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 RBM15Q96T37 977 aaKnown RBP eCLIP8.79□□□□□ -12e-7■■□□□ 13.5
CTNND1-225ENST00000530094 TARS2Q9BW92 718 aaKnown RBP8.79□□□□□ -1
CTNND1-225ENST00000530094 TMEM117Q9H0C3 514 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 ABHD16BQ9H3Z7 469 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 RIOX1Q9H6W3 641 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 VIPAS39Q9H9C1 493 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 SETD4Q9NVD3 440 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 ARL2BPQ9Y2Y0 163 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 CDY2AQ9Y6F7 541 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 CDY1Q9Y6F8 540 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 RASSF10A6NK89 507 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 ONECUT3O60422 494 aaPredicted RBP8.79□□□□□ -1
CTNND1-225ENST00000530094 FOXD4Q12950 439 aaPredicted RBP8.79□□□□□ -1
CTNND1-225ENST00000530094 PGM5Q15124 567 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 PTPAQ15257 358 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 KBTBD12Q3ZCT8 623 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 MRNIPQ6NTE8 343 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 MPZL3Q6UWV2 235 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 CATSPERGQ6ZRH7 1159 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 METTL16Q86W50 562 aaKnown RBP8.79□□□□□ -1
CTNND1-225ENST00000530094 SPATA4Q8NEY3 305 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 TMEM161AQ9NX61 479 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 TSR3Q9UJK0 312 aaKnown RBP8.79□□□□□ -1
CTNND1-225ENST00000530094 H3BRB1 525 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 TEX33O43247 280 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 MAP3K13O43283 966 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 RHOBTB1O94844 696 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 STIP1P31948 543 aaKnown RBP8.79□□□□□ -1
CTNND1-225ENST00000530094 ADCYAP1R1P41586 468 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 ZRANB3Q5FWF4 1079 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 FBXO38Q6PIJ6 1188 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 ZNF438Q7Z4V0 828 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 SPATA21Q7Z572 469 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 ANKMY2Q8IV38 441 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 USP33Q8TEY7 942 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 UBXN6Q9BZV1 441 aa8.79□□□□□ -1
CTNND1-225ENST00000530094 TUT1Q9H6E5 874 aaKnown RBP8.79□□□□□ -1
CTNND1-225ENST00000530094 GPRC5CQ9NQ84 441 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms