RNA–Protein interactions for RNA: ENST00000530085.2

RDX-208, Transcript of radixin, human

TSL 3

Gene RDX, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-208	ENST00000530085	SUN1	O94901	812 aa		4.64	□□□□□ -1.67
RDX-208	ENST00000530085	PLAT	P00750	562 aa		4.64	□□□□□ -1.67
RDX-208	ENST00000530085	APOBEC3A	P31941	199 aa	Predicted RBP	4.64	□□□□□ -1.67
RDX-208	ENST00000530085	TAP2	Q03519	686 aa		4.64	□□□□□ -1.67
RDX-208	ENST00000530085	KCNAB1	Q14722	419 aa		4.64	□□□□□ -1.67
RDX-208	ENST00000530085	TAF5	Q15542	800 aa		4.64	□□□□□ -1.67
RDX-208	ENST00000530085	SLC5A9	Q2M3M2	681 aa		4.64	□□□□□ -1.67
RDX-208	ENST00000530085	FAXC	Q5TGI0	409 aa		4.64	□□□□□ -1.67
RDX-208	ENST00000530085	MRNIP	Q6NTE8	343 aa		4.64	□□□□□ -1.67
RDX-208	ENST00000530085	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	4.64	□□□□□ -1.67
RDX-208	ENST00000530085		Q6ZSN1	163 aa		4.64	□□□□□ -1.67
RDX-208	ENST00000530085	RFX8	Q6ZV50	586 aa		4.64	□□□□□ -1.67
RDX-208	ENST00000530085	TMPRSS9	Q7Z410	1059 aa		4.64	□□□□□ -1.67
RDX-208	ENST00000530085	CIR1	Q86X95	450 aa	Predicted RBP	4.64	□□□□□ -1.67
RDX-208	ENST00000530085	CCDC28A	Q8IWP9	274 aa		4.64	□□□□□ -1.67
RDX-208	ENST00000530085	FEZF2	Q8TBJ5	459 aa		4.64	□□□□□ -1.67
RDX-208	ENST00000530085	BPIFB1	Q8TDL5	484 aa		4.64	□□□□□ -1.67
RDX-208	ENST00000530085	OTUD7A	Q8TE49	926 aa	Predicted RBP	4.64	□□□□□ -1.67
RDX-208	ENST00000530085	DCLRE1C	Q96SD1	692 aa	Known RBP	4.64	□□□□□ -1.67
RDX-208	ENST00000530085	FAM167B	Q9BTA0	163 aa		4.64	□□□□□ -1.67
RDX-208	ENST00000530085	SLC46A2	Q9BY10	475 aa		4.64	□□□□□ -1.67
RDX-208	ENST00000530085	GPR87	Q9BY21	358 aa		4.64	□□□□□ -1.67
RDX-208	ENST00000530085	XYLT2	Q9H1B5	865 aa		4.64	□□□□□ -1.67
RDX-208	ENST00000530085	HERC5	Q9UII4	1024 aa	Known RBP	4.64	□□□□□ -1.67
RDX-208	ENST00000530085	NEU2	Q9Y3R4	380 aa		4.64	□□□□□ -1.67
RDX-208	ENST00000530085	DTNA	Q9Y4J8	743 aa		4.64	□□□□□ -1.67
RDX-208	ENST00000530085	XDH	P47989	1333 aa		4.64	□□□□□ -1.67
RDX-208	ENST00000530085	CAPN14	A8MX76	684 aa		4.63	□□□□□ -1.67
RDX-208	ENST00000530085	hCG_1984214	I3L0E3	225 aa		4.63	□□□□□ -1.67
RDX-208	ENST00000530085	RGS10	O43665	173 aa		4.63	□□□□□ -1.67
RDX-208	ENST00000530085	PIAS2	O75928	621 aa		4.63	□□□□□ -1.67
RDX-208	ENST00000530085	RASAL1	O95294	804 aa		4.63	□□□□□ -1.67
RDX-208	ENST00000530085	GPANK1	O95872	356 aa		4.63	□□□□□ -1.67
RDX-208	ENST00000530085	PECAM1	P16284	738 aa	Predicted RBP	4.63	□□□□□ -1.67
RDX-208	ENST00000530085	KCNA2	P16389	499 aa		4.63	□□□□□ -1.67
RDX-208	ENST00000530085	KCNA3	P22001	575 aa		4.63	□□□□□ -1.67
RDX-208	ENST00000530085	FGFR4	P22455	802 aa		4.63	□□□□□ -1.67
RDX-208	ENST00000530085	POLE2	P56282	527 aa		4.63	□□□□□ -1.67
RDX-208	ENST00000530085	LOXL3	P58215	753 aa		4.63	□□□□□ -1.67
RDX-208	ENST00000530085	RNASE9	P60153	205 aa	Known RBP	4.63	□□□□□ -1.67
RDX-208	ENST00000530085	HSD11B2	P80365	405 aa		4.63	□□□□□ -1.67
RDX-208	ENST00000530085	MYO1E	Q12965	1108 aa		4.63	□□□□□ -1.67
RDX-208	ENST00000530085	DYRK1A	Q13627	763 aa		4.63	□□□□□ -1.67
RDX-208	ENST00000530085	TRIM71	Q2Q1W2	868 aa	Known RBP	4.63	□□□□□ -1.67
RDX-208	ENST00000530085	ZFYVE27	Q5T4F4	411 aa		4.63	□□□□□ -1.67
RDX-208	ENST00000530085	MANEAL	Q5VSG8	457 aa		4.63	□□□□□ -1.67
RDX-208	ENST00000530085	CACHD1	Q5VU97	1274 aa		4.63	□□□□□ -1.67
RDX-208	ENST00000530085	LIN54	Q6MZP7	749 aa		4.63	□□□□□ -1.67
RDX-208	ENST00000530085	FOXR2	Q6PJQ5	311 aa		4.63	□□□□□ -1.67
RDX-208	ENST00000530085	MAMDC4	Q6UXC1	1216 aa		4.63	□□□□□ -1.67
RDX-208	ENST00000530085	TMEM108	Q6UXF1	575 aa		4.63	□□□□□ -1.67
RDX-208	ENST00000530085		Q6ZRM9	215 aa		4.63	□□□□□ -1.67
RDX-208	ENST00000530085	LIMS2	Q7Z4I7	341 aa		4.63	□□□□□ -1.67
RDX-208	ENST00000530085	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	4.63	□□□□□ -1.67
RDX-208	ENST00000530085	IL17RE	Q8NFR9	667 aa		4.63	□□□□□ -1.67
RDX-208	ENST00000530085	UBXN10	Q96LJ8	280 aa		4.63	□□□□□ -1.67
RDX-208	ENST00000530085	ZSCAN31	Q96LW9	406 aa	Predicted RBP	4.63	□□□□□ -1.67
RDX-208	ENST00000530085	FAM227B	Q96M60	508 aa		4.63	□□□□□ -1.67
RDX-208	ENST00000530085	PRPF18	Q99633	342 aa	Known RBP	4.63	□□□□□ -1.67
RDX-208	ENST00000530085	ZSWIM1	Q9BR11	485 aa		4.63	□□□□□ -1.67
RDX-208	ENST00000530085	PTDSS2	Q9BVG9	487 aa		4.63	□□□□□ -1.67
RDX-208	ENST00000530085	TRIM5	Q9C035	493 aa		4.63	□□□□□ -1.67
RDX-208	ENST00000530085	RRN3	Q9NYV6	651 aa		4.63	□□□□□ -1.67
RDX-208	ENST00000530085	CA14	Q9ULX7	337 aa		4.63	□□□□□ -1.67
RDX-208	ENST00000530085	HPSE	Q9Y251	543 aa		4.63	□□□□□ -1.67
RDX-208	ENST00000530085	MRPS17	Q9Y2R5	130 aa	Known RBP	4.63	□□□□□ -1.67
RDX-208	ENST00000530085	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	4.63	□□□□□ -1.67
RDX-208	ENST00000530085	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	4.63	□□□□□ -1.67
RDX-208	ENST00000530085	LRRFIP2	Q9Y608	721 aa	Known RBP	4.63	□□□□□ -1.67
RDX-208	ENST00000530085	ADAMTS20	P59510	1910 aa		4.62	□□□□□ -1.67
RDX-208	ENST00000530085	PATE3	B3GLJ2	98 aa		4.62	□□□□□ -1.67
RDX-208	ENST00000530085	OVOL3	O00110	214 aa		4.62	□□□□□ -1.67
RDX-208	ENST00000530085	IRAK2	O43187	625 aa		4.62	□□□□□ -1.67
RDX-208	ENST00000530085	ASNA1	O43681	348 aa		4.62	□□□□□ -1.67
RDX-208	ENST00000530085	NTSR2	O95665	410 aa		4.62	□□□□□ -1.67
RDX-208	ENST00000530085	GLP2R	O95838	553 aa		4.62	□□□□□ -1.67
RDX-208	ENST00000530085	PYGL	P06737	847 aa		4.62	□□□□□ -1.67
RDX-208	ENST00000530085	ELANE	P08246	267 aa		4.62	□□□□□ -1.67
RDX-208	ENST00000530085	NPPB	P16860	134 aa		4.62	□□□□□ -1.67
RDX-208	ENST00000530085	ITGAL	P20701	1170 aa		4.62	□□□□□ -1.67
RDX-208	ENST00000530085	COMT	P21964	271 aa		4.62	□□□□□ -1.67
RDX-208	ENST00000530085	MAN2A2	P49641	1150 aa		4.62	□□□□□ -1.67
RDX-208	ENST00000530085	ANXA11	P50995	505 aa	Known RBP	4.62	□□□□□ -1.67
RDX-208	ENST00000530085	MC2R	Q01718	297 aa		4.62	□□□□□ -1.67
RDX-208	ENST00000530085	OCA2	Q04671	838 aa		4.62	□□□□□ -1.67
RDX-208	ENST00000530085	NSUN2	Q08J23	767 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
RDX-208	ENST00000530085	TIGD6	Q17RP2	521 aa		4.62	□□□□□ -1.67
RDX-208	ENST00000530085	PTCHD3	Q3KNS1	767 aa		4.62	□□□□□ -1.67
RDX-208	ENST00000530085	PDCD4	Q53EL6	469 aa	Known RBP	4.62	□□□□□ -1.67
RDX-208	ENST00000530085	SULT6B1	Q6IMI4	303 aa		4.62	□□□□□ -1.67
RDX-208	ENST00000530085	MZT2A	Q6P582	158 aa		4.62	□□□□□ -1.67
RDX-208	ENST00000530085	GLB1L	Q6UWU2	654 aa		4.62	□□□□□ -1.67
RDX-208	ENST00000530085	CLNK	Q7Z7G1	428 aa		4.62	□□□□□ -1.67
RDX-208	ENST00000530085	MOGAT3	Q86VF5	341 aa		4.62	□□□□□ -1.67
RDX-208	ENST00000530085	GATAD2A	Q86YP4	633 aa		4.62	□□□□□ -1.67
RDX-208	ENST00000530085	MAPKAPK5	Q8IW41	473 aa		4.62	□□□□□ -1.67
RDX-208	ENST00000530085	CLASRP	Q8N2M8	674 aa	Known RBP	4.62	□□□□□ -1.67
RDX-208	ENST00000530085	TEX19	Q8NA77	164 aa		4.62	□□□□□ -1.67
RDX-208	ENST00000530085	OR1N1	Q8NGS0	311 aa		4.62	□□□□□ -1.67
RDX-208	ENST00000530085		Q8TCH9	128 aa		4.62	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms