RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 CHRM1P11229 460 aaPredicted RBP12.54□□□□□ -0.4
AMBRA1-207ENST00000529553 PLA2G2AP14555 144 aa12.54□□□□□ -0.4
AMBRA1-207ENST00000529553 MCM7P33993 719 aa12.54□□□□□ -0.4
AMBRA1-207ENST00000529553 KIR2DL1P43626 348 aaPredicted RBP12.54□□□□□ -0.4
AMBRA1-207ENST00000529553 PDIA5Q14554 519 aa12.54□□□□□ -0.4
AMBRA1-207ENST00000529553 NFE2Q16621 373 aaPredicted RBP12.54□□□□□ -0.4
AMBRA1-207ENST00000529553 GAB4Q2WGN9 574 aa12.54□□□□□ -0.4
AMBRA1-207ENST00000529553 DIS3L2Q8IYB7 885 aaKnown RBP12.54□□□□□ -0.4
AMBRA1-207ENST00000529553 PGBD3Q8N328 593 aa12.54□□□□□ -0.4
AMBRA1-207ENST00000529553 TMEM161BQ8NDZ6 487 aa12.54□□□□□ -0.4
AMBRA1-207ENST00000529553 SPATA18Q8TC71 538 aa12.54□□□□□ -0.4
AMBRA1-207ENST00000529553 LRRC15Q8TF66 581 aa12.54□□□□□ -0.4
AMBRA1-207ENST00000529553 HMGB4Q8WW32 186 aa12.54□□□□□ -0.4
AMBRA1-207ENST00000529553 KCNN1Q92952 543 aa12.54□□□□□ -0.4
AMBRA1-207ENST00000529553 ABCB6Q9NP58 842 aa12.54□□□□□ -0.4
AMBRA1-207ENST00000529553 ABI2Q9NYB9 513 aaPredicted RBP12.54□□□□□ -0.4
AMBRA1-207ENST00000529553 SUSD2Q9UGT4 822 aa12.54□□□□□ -0.4
AMBRA1-207ENST00000529553 PCOLCE2Q9UKZ9 415 aa12.54□□□□□ -0.4
AMBRA1-207ENST00000529553 RAI2Q9Y5P3 530 aa12.54□□□□□ -0.4
AMBRA1-207ENST00000529553 APC2O95996 2303 aa12.54□□□□□ -0.4
AMBRA1-207ENST00000529553 URB1O60287 2271 aaKnown RBP12.53□□□□□ -0.4
AMBRA1-207ENST00000529553 TCRBV21S2A2A0A5A6 115 aa12.53□□□□□ -0.4
AMBRA1-207ENST00000529553 E9PAM4 449 aa12.53□□□□□ -0.4
AMBRA1-207ENST00000529553 PPEF2O14830 753 aa12.53□□□□□ -0.4
AMBRA1-207ENST00000529553 ZNF217O75362 1048 aa12.53□□□□□ -0.4
AMBRA1-207ENST00000529553 PRPF40AO75400 957 aaKnown RBP12.53□□□□□ -0.4
AMBRA1-207ENST00000529553 TADA3O75528 432 aa12.53□□□□□ -0.4
AMBRA1-207ENST00000529553 C1QL1O75973 258 aa12.53□□□□□ -0.4
AMBRA1-207ENST00000529553 DKK1O94907 266 aa12.53□□□□□ -0.4
AMBRA1-207ENST00000529553 REC8O95072 547 aa12.53□□□□□ -0.4
AMBRA1-207ENST00000529553 KAT7O95251 611 aa12.53□□□□□ -0.4
AMBRA1-207ENST00000529553 CTDNEP1O95476 244 aa12.53□□□□□ -0.4
AMBRA1-207ENST00000529553 APODP05090 189 aa12.53□□□□□ -0.4
AMBRA1-207ENST00000529553 OR52Z1P0C646 297 aa12.53□□□□□ -0.4
AMBRA1-207ENST00000529553 MAPTP10636 758 aaKnown RBP12.53□□□□□ -0.4
AMBRA1-207ENST00000529553 FDPSP14324 419 aaKnown RBP12.53□□□□□ -0.4
AMBRA1-207ENST00000529553 HDCP19113 662 aa12.53□□□□□ -0.4
AMBRA1-207ENST00000529553 TIE1P35590 1138 aa12.53□□□□□ -0.4
AMBRA1-207ENST00000529553 GRIA2P42262 883 aa12.53□□□□□ -0.4
AMBRA1-207ENST00000529553 FXR2P51116 673 aaKnown RBP eCLIP12.53□□□□□ -0.4
AMBRA1-207ENST00000529553 GUCY2FP51841 1108 aa12.53□□□□□ -0.4
AMBRA1-207ENST00000529553 SYCP2LQ5T4T6 812 aa12.53□□□□□ -0.4
AMBRA1-207ENST00000529553 RINT1Q6NUQ1 792 aa12.53□□□□□ -0.4
AMBRA1-207ENST00000529553 C1orf186Q6ZWK4 172 aa12.53□□□□□ -0.4
AMBRA1-207ENST00000529553 TRMT11Q7Z4G4 463 aaKnown RBP12.53□□□□□ -0.4
AMBRA1-207ENST00000529553 GALNT15Q8N3T1 639 aa12.53□□□□□ -0.4
AMBRA1-207ENST00000529553 ARL14EPQ8N8R7 260 aaPredicted RBP12.53□□□□□ -0.4
AMBRA1-207ENST00000529553 OR2I1PQ8NGU4 316 aa12.53□□□□□ -0.4
AMBRA1-207ENST00000529553 LEO1Q8WVC0 666 aaPredicted RBP12.53□□□□□ -0.4
AMBRA1-207ENST00000529553 ZNF419Q96HQ0 510 aaPredicted RBP12.53□□□□□ -0.4
AMBRA1-207ENST00000529553 SLC22A12Q96S37 553 aa12.53□□□□□ -0.4
AMBRA1-207ENST00000529553 PI4K2AQ9BTU6 479 aa12.53□□□□□ -0.4
AMBRA1-207ENST00000529553 RPF1Q9H9Y2 349 aaKnown RBP12.53□□□□□ -0.4
AMBRA1-207ENST00000529553 TRPC7Q9HCX4 862 aa12.53□□□□□ -0.4
AMBRA1-207ENST00000529553 PDRG1Q9NUG6 133 aa12.53□□□□□ -0.4
AMBRA1-207ENST00000529553 DDX19AQ9NUU7 478 aaKnown RBP12.53□□□□□ -0.4
AMBRA1-207ENST00000529553 KALRNO60229 2985 aa12.53□□□□□ -0.4
AMBRA1-207ENST00000529553 ANTXRLA6NF34 631 aa12.52□□□□□ -0.41
AMBRA1-207ENST00000529553 TRABD2BA6NFA1 517 aa12.52□□□□□ -0.41
AMBRA1-207ENST00000529553 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.52□□□□□ -0.41
AMBRA1-207ENST00000529553 H0YCG3 227 aa12.52□□□□□ -0.41
AMBRA1-207ENST00000529553 SLC9A3R1O14745 358 aaPredicted RBP12.52□□□□□ -0.41
AMBRA1-207ENST00000529553 ADAM23O75077 832 aa12.52□□□□□ -0.41
AMBRA1-207ENST00000529553 PRB1P04280 392 aa12.52□□□□□ -0.41
AMBRA1-207ENST00000529553 NFICP08651 508 aa12.52□□□□□ -0.41
AMBRA1-207ENST00000529553 ZNF883P0CG24 379 aa12.52□□□□□ -0.41
AMBRA1-207ENST00000529553 PLS3P13797 630 aa12.52□□□□□ -0.41
AMBRA1-207ENST00000529553 GNSP15586 552 aa12.52□□□□□ -0.41
AMBRA1-207ENST00000529553 SCP2P22307 547 aa12.52□□□□□ -0.41
AMBRA1-207ENST00000529553 GUCY2CP25092 1073 aa12.52□□□□□ -0.41
AMBRA1-207ENST00000529553 CDC25AP30304 524 aa12.52□□□□□ -0.41
AMBRA1-207ENST00000529553 MATR3P43243 847 aaKnown RBP eCLIP12.52□□□□□ -0.411e-6■□□□□ 9.9
AMBRA1-207ENST00000529553 TAF6P49848 677 aa12.52□□□□□ -0.41
AMBRA1-207ENST00000529553 TSPY1Q01534 308 aa12.52□□□□□ -0.41
AMBRA1-207ENST00000529553 CYP4F3Q08477 520 aa12.52□□□□□ -0.41
AMBRA1-207ENST00000529553 MAPK7Q13164 816 aa12.52□□□□□ -0.41
AMBRA1-207ENST00000529553 ENOX2Q16206 610 aaKnown RBP12.52□□□□□ -0.41
AMBRA1-207ENST00000529553 PLEKHG6Q3KR16 790 aa12.52□□□□□ -0.41
AMBRA1-207ENST00000529553 PREPLQ4J6C6 727 aaPredicted RBP12.52□□□□□ -0.41
AMBRA1-207ENST00000529553 PDCD7Q8N8D1 485 aaKnown RBP12.52□□□□□ -0.41
AMBRA1-207ENST00000529553 FOXJ1Q92949 421 aa12.52□□□□□ -0.41
AMBRA1-207ENST00000529553 YTHDC1Q96MU7 727 aaKnown RBP12.52□□□□□ -0.41
AMBRA1-207ENST00000529553 CDC6Q99741 560 aa12.52□□□□□ -0.41
AMBRA1-207ENST00000529553 HAPLN2Q9GZV7 340 aa12.52□□□□□ -0.41
AMBRA1-207ENST00000529553 LRWD1Q9UFC0 647 aa12.52□□□□□ -0.41
AMBRA1-207ENST00000529553 OGTO15294 1046 aa12.51□□□□□ -0.41
AMBRA1-207ENST00000529553 ZBTB24O43167 697 aaPredicted RBP12.51□□□□□ -0.41
AMBRA1-207ENST00000529553 FAM189A1O60320 539 aa12.51□□□□□ -0.41
AMBRA1-207ENST00000529553 TNFSF9P41273 254 aa12.51□□□□□ -0.41
AMBRA1-207ENST00000529553 ABCG1P45844 678 aa12.51□□□□□ -0.41
AMBRA1-207ENST00000529553 SLC6A11P48066 632 aa12.51□□□□□ -0.41
AMBRA1-207ENST00000529553 CAMK2BQ13554 666 aa12.51□□□□□ -0.41
AMBRA1-207ENST00000529553 TRIM29Q14134 588 aa12.51□□□□□ -0.41
AMBRA1-207ENST00000529553 KCNB1Q14721 858 aa12.51□□□□□ -0.41
AMBRA1-207ENST00000529553 DHCR24Q15392 516 aa12.51□□□□□ -0.41
AMBRA1-207ENST00000529553 SAFBQ15424 915 aaKnown RBP eCLIP12.51□□□□□ -0.41
AMBRA1-207ENST00000529553 DDR2Q16832 855 aa12.51□□□□□ -0.41
AMBRA1-207ENST00000529553 EMC10Q5UCC4 262 aa12.51□□□□□ -0.41
AMBRA1-207ENST00000529553 WSCD1Q658N2 575 aa12.51□□□□□ -0.41
AMBRA1-207ENST00000529553 JADE1Q6IE81 842 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms