RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 ASB7Q9H672 318 aa9.69□□□□□ -0.86
VPS11-203ENST00000529545 TMEM206Q9H813 350 aa9.69□□□□□ -0.86
VPS11-203ENST00000529545 EVLQ9UI08 416 aaPredicted RBP9.69□□□□□ -0.86
VPS11-203ENST00000529545 A0A0B4J269 797 aa9.68□□□□□ -0.86
VPS11-203ENST00000529545 ANO9A1A5B4 782 aa9.68□□□□□ -0.86
VPS11-203ENST00000529545 KPNA7A9QM74 516 aa9.68□□□□□ -0.86
VPS11-203ENST00000529545 PATE3B3GLJ2 98 aa9.68□□□□□ -0.86
VPS11-203ENST00000529545 K7ENM7 598 aa9.68□□□□□ -0.86
VPS11-203ENST00000529545 FAM13AO94988 1023 aa9.68□□□□□ -0.86
VPS11-203ENST00000529545 NFATC1O95644 943 aa9.68□□□□□ -0.86
VPS11-203ENST00000529545 NFICP08651 508 aa9.68□□□□□ -0.86
VPS11-203ENST00000529545 PLA2G4BP0C869 781 aa9.68□□□□□ -0.86
VPS11-203ENST00000529545 MAPK8P45983 427 aa9.68□□□□□ -0.86
VPS11-203ENST00000529545 PDE6CP51160 858 aa9.68□□□□□ -0.86
VPS11-203ENST00000529545 ATXN3P54252 364 aaPredicted RBP9.68□□□□□ -0.86
VPS11-203ENST00000529545 RING1Q06587 406 aa9.68□□□□□ -0.86
VPS11-203ENST00000529545 BYSLQ13895 437 aaKnown RBP9.68□□□□□ -0.86
VPS11-203ENST00000529545 SV2CQ496J9 727 aa9.68□□□□□ -0.86
VPS11-203ENST00000529545 C2orf27AQ580R0 203 aa9.68□□□□□ -0.86
VPS11-203ENST00000529545 TRIM61Q5EBN2 209 aa9.68□□□□□ -0.86
VPS11-203ENST00000529545 LPCAT2Q7L5N7 544 aa9.68□□□□□ -0.86
VPS11-203ENST00000529545 LRRTM3Q86VH5 581 aa9.68□□□□□ -0.86
VPS11-203ENST00000529545 USP33Q8TEY7 942 aa9.68□□□□□ -0.86
VPS11-203ENST00000529545 ZNF560Q96MR9 790 aa9.68□□□□□ -0.86
VPS11-203ENST00000529545 PI4K2AQ9BTU6 479 aa9.68□□□□□ -0.86
VPS11-203ENST00000529545 MMTAG2Q9BU76 263 aaKnown RBP9.68□□□□□ -0.86
VPS11-203ENST00000529545 DPP3Q9NY33 737 aa9.68□□□□□ -0.86
VPS11-203ENST00000529545 CPSF3Q9UKF6 684 aaKnown RBP9.68□□□□□ -0.86
VPS11-203ENST00000529545 ODF2LQ9ULJ1 636 aa9.68□□□□□ -0.86
VPS11-203ENST00000529545 C2CD2Q9Y426 696 aa9.68□□□□□ -0.86
VPS11-203ENST00000529545 PCDHB6Q9Y5E3 794 aa9.68□□□□□ -0.86
VPS11-203ENST00000529545 WNT6Q9Y6F9 365 aa9.68□□□□□ -0.86
VPS11-203ENST00000529545 IGF2RP11717 2491 aa9.68□□□□□ -0.86
VPS11-203ENST00000529545 ABCA7Q8IZY2 2146 aa9.68□□□□□ -0.86
VPS11-203ENST00000529545 OBSL1O75147 1896 aa9.68□□□□□ -0.86
VPS11-203ENST00000529545 MYO16Q9Y6X6 1858 aa9.68□□□□□ -0.86
VPS11-203ENST00000529545 KIAA1549LQ6ZVL6 1849 aa9.68□□□□□ -0.86
VPS11-203ENST00000529545 H0Y626 953 aa9.67□□□□□ -0.86
VPS11-203ENST00000529545 TULP1O00294 542 aaPredicted RBP9.67□□□□□ -0.86
VPS11-203ENST00000529545 TNFRSF10BO14763 440 aa9.67□□□□□ -0.86
VPS11-203ENST00000529545 HYAL3O43820 417 aaPredicted RBP9.67□□□□□ -0.86
VPS11-203ENST00000529545 FAM189A1O60320 539 aa9.67□□□□□ -0.86
VPS11-203ENST00000529545 EIF5BO60841 1220 aaKnown RBP9.67□□□□□ -0.86
VPS11-203ENST00000529545 TRIM16O95361 564 aa9.67□□□□□ -0.86
VPS11-203ENST00000529545 PIGRP01833 764 aa9.67□□□□□ -0.86
VPS11-203ENST00000529545 KRT18P05783 430 aaKnown RBP9.67□□□□□ -0.86
VPS11-203ENST00000529545 BCKDHBP21953 392 aa9.67□□□□□ -0.86
VPS11-203ENST00000529545 PNPLA4P41247 253 aa9.67□□□□□ -0.86
VPS11-203ENST00000529545 SLC12A3P55017 1021 aa9.67□□□□□ -0.86
VPS11-203ENST00000529545 SEC13P55735 322 aa9.67□□□□□ -0.86
VPS11-203ENST00000529545 SIM1P81133 766 aaPredicted RBP9.67□□□□□ -0.86
VPS11-203ENST00000529545 MRPS21P82921 87 aaKnown RBP9.67□□□□□ -0.86
VPS11-203ENST00000529545 KCNB1Q14721 858 aa9.67□□□□□ -0.86
VPS11-203ENST00000529545 ZNF77Q15935 545 aa9.67□□□□□ -0.86
VPS11-203ENST00000529545 EML3Q32P44 896 aa9.67□□□□□ -0.86
VPS11-203ENST00000529545 HYIQ5T013 277 aa9.67□□□□□ -0.86
VPS11-203ENST00000529545 NAIF1Q69YI7 327 aaPredicted RBP9.67□□□□□ -0.86
VPS11-203ENST00000529545 ADALQ6DHV7 355 aa9.67□□□□□ -0.86
VPS11-203ENST00000529545 SLFN12LQ6IEE8 588 aa9.67□□□□□ -0.86
VPS11-203ENST00000529545 RASSF3Q86WH2 238 aa9.67□□□□□ -0.86
VPS11-203ENST00000529545 SYT12Q8IV01 421 aa9.67□□□□□ -0.86
VPS11-203ENST00000529545 CCDC83Q8IWF9 413 aa9.67□□□□□ -0.86
VPS11-203ENST00000529545 EFCAB13Q8IY85 973 aa9.67□□□□□ -0.86
VPS11-203ENST00000529545 HDDC3Q8N4P3 179 aa9.67□□□□□ -0.86
VPS11-203ENST00000529545 CCDC33Q8N5R6 958 aa9.67□□□□□ -0.86
VPS11-203ENST00000529545 MYCT1Q8N699 235 aa9.67□□□□□ -0.86
VPS11-203ENST00000529545 SH3RF2Q8TEC5 729 aa9.67□□□□□ -0.86
VPS11-203ENST00000529545 WHAMMQ8TF30 809 aa9.67□□□□□ -0.86
VPS11-203ENST00000529545 KCNN1Q92952 543 aa9.67□□□□□ -0.86
VPS11-203ENST00000529545 TRMT2BQ96GJ1 504 aaKnown RBP9.67□□□□□ -0.86
VPS11-203ENST00000529545 MYRFLQ96LU7 910 aa9.67□□□□□ -0.86
VPS11-203ENST00000529545 CYP2S1Q96SQ9 504 aa9.67□□□□□ -0.86
VPS11-203ENST00000529545 PLIN2Q99541 437 aa9.67□□□□□ -0.86
VPS11-203ENST00000529545 CCSER1Q9C0I3 900 aa9.67□□□□□ -0.86
VPS11-203ENST00000529545 ABCB6Q9NP58 842 aa9.67□□□□□ -0.86
VPS11-203ENST00000529545 POLMQ9NP87 494 aaPredicted RBP9.67□□□□□ -0.86
VPS11-203ENST00000529545 BCCIPQ9P287 314 aaKnown RBP eCLIP9.67□□□□□ -0.86
VPS11-203ENST00000529545 MMP17Q9ULZ9 603 aa9.67□□□□□ -0.86
VPS11-203ENST00000529545 LIMCH1Q9UPQ0 1083 aa9.67□□□□□ -0.86
VPS11-203ENST00000529545 MSRB2Q9Y3D2 182 aa9.67□□□□□ -0.86
VPS11-203ENST00000529545 SCN1AP35498 2009 aa9.66□□□□□ -0.86
VPS11-203ENST00000529545 NPHP3-ACAD11A0A0J9YXS1 232 aa9.66□□□□□ -0.86
VPS11-203ENST00000529545 MYMKA6NI61 221 aa9.66□□□□□ -0.86
VPS11-203ENST00000529545 TRAK2O60296 914 aa9.66□□□□□ -0.86
VPS11-203ENST00000529545 HUS1O60921 280 aa9.66□□□□□ -0.86
VPS11-203ENST00000529545 NOL4O94818 638 aa9.66□□□□□ -0.86
VPS11-203ENST00000529545 ENGP17813 658 aa9.66□□□□□ -0.86
VPS11-203ENST00000529545 HDCP19113 662 aa9.66□□□□□ -0.86
VPS11-203ENST00000529545 GPR15P49685 360 aa9.66□□□□□ -0.86
VPS11-203ENST00000529545 ACOT2P49753 483 aa9.66□□□□□ -0.86
VPS11-203ENST00000529545 TOB1P50616 345 aaPredicted RBP9.66□□□□□ -0.86
VPS11-203ENST00000529545 MYL7Q01449 175 aa9.66□□□□□ -0.86
VPS11-203ENST00000529545 KCNC4Q03721 635 aa9.66□□□□□ -0.86
VPS11-203ENST00000529545 USP4Q13107 963 aa9.66□□□□□ -0.86
VPS11-203ENST00000529545 CRY1Q16526 586 aa9.66□□□□□ -0.86
VPS11-203ENST00000529545 IL17AQ16552 155 aa9.66□□□□□ -0.86
VPS11-203ENST00000529545 SPDYCQ5MJ68 293 aa9.66□□□□□ -0.86
VPS11-203ENST00000529545 SDHAF4Q5VUM1 108 aa9.66□□□□□ -0.86
VPS11-203ENST00000529545 ARMCX6Q7L4S7 300 aa9.66□□□□□ -0.86
VPS11-203ENST00000529545 NT5DC4Q86YG4 428 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms